Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo16g00305 | ATGGCCACCGGTGCGCTGCTCCGTTCTCTTCGACGTCGCGATTTAGCATCCTCCTCCCTTGCAGCTTACCGATCATTAACAAGCAATGCCAAGCCGTCATGGGGAAACTCTCACCTTAGCCAATCATGGGCTACTTTGTCCAGGCCATTCAGTTCAAAGCCTGCTGGGAATGATGTAATTGGTATTGACTTGGGTACCACCAATTCTTGTGTTTCTGTCATGGAAGGGAAGAATCCAAAAGTTATTGAAAATTCAGAAGGTGCAAGAACCACACCGTCCGTGGTTGCTTTCAATCAGAAGGGCGAGCTACTTGTAGGAACACCAGCAAAGAGACAGGCAGTGACAAATCCAACGAACACTGTGTTTGGAACCAAACGTCTGATTGGTAGACGCTTTGATGATCCTCAGACACAGAAGGAAATGAAGATGGTGCCATATAAAATAGTCAGAGCTCCAAATGGAGATGCTTGGGTTGAAGCAAACGGACAGCAGTACTCACCGAGTCAGATTGGTGCTTTTGTTCTAACAAAGATGAAGGAAACTGCTGAGGCCTACCTTGGTAAGAGCGTGTCTAAGGCTGTGATCACTGTTCCAGCTTATTTCAACGATGCACAGAGACAGGCAACAAAGGATGCTGGCAGGATTGCTGGTTTGGATGTTCTTAGAATTATCAACGAGCCCACTGCTGCTGCACTTTCTTATGGAATGAACAATAAGGAGGGTCTAATTGCTGTTTTTGATCTTGGTGGTGGCACATTCGATGTTTCCATCTTGGAGATATCCAATGGTGTTTTTGAGGTGAAATCAACAAATGGTGACACATTCTTAGGTGGAGAGGATTTTGACAATGCTCTTTTGGACTTCCTAGTGAGCGAGTTCAAACGAACTGAGGGAATTGACCTTACCAAGGACAAGCTTGCCTTGCAGAGGCTTAGAGAAGCTGCAGAAAAGGCAAAGATTGAACTATCATCTACATCACAGACTGAGATTAACCTGCCATTTATCACTGCTGATGCATCTGGTGCAAAGCATTTGAACATCACTTTGACCAGGTCGAAGTTTGAAAGCCTTGTTAATCACTTGATTGAAAGGACCAAGGCCCCATGTAAAAATTGTTTAAAGGATGCCAGTATTTCTATCAAAGATGTCGATGAAGTTCTTTTAGTTGGTGGAATGACTCGTGTACCAAAGGTGCAAGAGGTTGTCACAGAAATTTTTGGAAAGAGCCCCAGCAAAGGAGTGAACCCTGATGAAGCAGTTGCTATGGGAGCTGCAATTCAGGGTGGCATTCTTCGTGGTGATGTCAAAGAATTGCTTCTATTGGATGTTACCCCTCTATCGCTCGGTATTGAGACACTTGGGGGGATCTTTACACGGTTGATCAGTCGGAACACTACCATTCCAACTAAGAAGAGCCAGGTGTTCTCAACCGCAGCTGACAATCAGACCCAGGTGGGTATCAAGGTATTGCAAGGTGAGAGAGAAATGGCCTCTGACAACAAGCTTCTAGGCGAGTTCGAGTTAGTTGGAATTCCTCCTGCCCCAAGAGGACTGCCTCAGATTGAAGTGACATTCGACATCGATGCCAATGGTATTGTTACCGTCTCTGCAAAGGACAAGTCCACCGGTAAAGAGCAACAAATCACCATTCGATCTTCTGGAGGACTCTCAGAAGATGAAATTGAGAAAATGGTGAAAGAAGCGGAGTTGCATGCCCAGAAGGATCAAGAGAGAAAGGCTCTTATTGACATCAGAAACAGTGCAGATACTACCATATACAGCATCGAGAAGAGCTTGGGTGAATATAGGGAGAAAATACCAAGTGAGGTTGCCAAAGAAATCGAGGATGCGGTGGCAGAGTTGAGGAAGGCAATGTCAGAAGACAACATTGAAGAGATTAAGTCGAAACTTGATGCCGCCAACAAGGCTGTTTCCAAGATTGGGCAACACATGGCTGGTGGTTCCGGTGGTGGCTCCGCTTCTGGAGGATCTCAGGGTGGCGAACAAGCCCCCGAAGCCGAGTACGAAGAGGTGAAGAAATAA | 2043 | 45.91 | MATGALLRSLRRRDLASSSLAAYRSLTSNAKPSWGNSHLSQSWATLSRPFSSKPAGNDVIGIDLGTTNSCVSVMEGKNPKVIENSEGARTTPSVVAFNQKGELLVGTPAKRQAVTNPTNTVFGTKRLIGRRFDDPQTQKEMKMVPYKIVRAPNGDAWVEANGQQYSPSQIGAFVLTKMKETAEAYLGKSVSKAVITVPAYFNDAQRQATKDAGRIAGLDVLRIINEPTAAALSYGMNNKEGLIAVFDLGGGTFDVSILEISNGVFEVKSTNGDTFLGGEDFDNALLDFLVSEFKRTEGIDLTKDKLALQRLREAAEKAKIELSSTSQTEINLPFITADASGAKHLNITLTRSKFESLVNHLIERTKAPCKNCLKDASISIKDVDEVLLVGGMTRVPKVQEVVTEIFGKSPSKGVNPDEAVAMGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLISRNTTIPTKKSQVFSTAADNQTQVGIKVLQGEREMASDNKLLGEFELVGIPPAPRGLPQIEVTFDIDANGIVTVSAKDKSTGKEQQITIRSSGGLSEDEIEKMVKEAELHAQKDQERKALIDIRNSADTTIYSIEKSLGEYREKIPSEVAKEIEDAVAELRKAMSEDNIEEIKSKLDAANKAVSKIGQHMAGGSGGGSASGGSQGGEQAPEAEYEEVKK | 680 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
16 | 1399820 | 1403923 | + | CmoCh16G003050.1 | Cmo16g00305 | 399340 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo16g00305 | 680 | SUPERFAMILY | Heat shock protein 70kD (HSP70), C-terminal subdomain | 583 | 658 | IPR029048 | - | |
Cmo16g00305 | 680 | Coils | Coil | 611 | 643 | - | - | |
Cmo16g00305 | 680 | Gene3D | Substrate Binding Domain Of DNAk; Chain A, domain 1 | 431 | 555 | IPR029047 | - | |
Cmo16g00305 | 680 | Gene3D | - | 235 | 415 | - | - | |
Cmo16g00305 | 680 | Pfam | Hsp70 protein | 59 | 651 | IPR013126 | GO:0005524|GO:0140662 | |
Cmo16g00305 | 680 | ProSitePatterns | Heat shock hsp70 proteins family signature 3. | 386 | 400 | IPR018181 | - | |
Cmo16g00305 | 680 | CDD | HSPA9-like_NBD | 56 | 431 | - | - | |
Cmo16g00305 | 680 | ProSitePatterns | Heat shock hsp70 proteins family signature 2. | 245 | 258 | IPR018181 | - | |
Cmo16g00305 | 680 | SUPERFAMILY | Heat shock protein 70kD (HSP70), peptide-binding domain | 433 | 589 | IPR029047 | - | |
Cmo16g00305 | 680 | Coils | Coil | 301 | 328 | - | - | |
Cmo16g00305 | 680 | SUPERFAMILY | Actin-like ATPase domain | 59 | 239 | IPR043129 | - | |
Cmo16g00305 | 680 | Hamap | Chaperone protein DnaK [dnaK]. | 56 | 678 | IPR012725 | GO:0005524|GO:0006457|GO:0051082 | |
Cmo16g00305 | 680 | PANTHER | HEAT SHOCK 70 KDA PROTEIN, MITOCHONDRIAL | 32 | 662 | - | - | |
Cmo16g00305 | 680 | PRINTS | 70kDa heat shock protein signature | 58 | 71 | - | - | |
Cmo16g00305 | 680 | PRINTS | 70kDa heat shock protein signature | 86 | 98 | - | - | |
Cmo16g00305 | 680 | PRINTS | 70kDa heat shock protein signature | 109 | 117 | - | - | |
Cmo16g00305 | 680 | PRINTS | 70kDa heat shock protein signature | 193 | 213 | - | - | |
Cmo16g00305 | 680 | PRINTS | 70kDa heat shock protein signature | 251 | 261 | - | - | |
Cmo16g00305 | 680 | PRINTS | 70kDa heat shock protein signature | 383 | 399 | - | - | |
Cmo16g00305 | 680 | PRINTS | 70kDa heat shock protein signature | 414 | 434 | - | - | |
Cmo16g00305 | 680 | PRINTS | 70kDa heat shock protein signature | 437 | 456 | - | - | |
Cmo16g00305 | 680 | PRINTS | 70kDa heat shock protein signature | 518 | 534 | - | - | |
Cmo16g00305 | 680 | ProSitePatterns | Heat shock hsp70 proteins family signature 1. | 62 | 69 | IPR018181 | - | |
Cmo16g00305 | 680 | SUPERFAMILY | Actin-like ATPase domain | 240 | 431 | IPR043129 | - | |
Cmo16g00305 | 680 | Gene3D | Actin; Chain A, domain 4 | 278 | 365 | - | - | |
Cmo16g00305 | 680 | Gene3D | - | 60 | 428 | - | - | |
Cmo16g00305 | 680 | MobiDBLite | consensus disorder prediction | 648 | 680 | - | - | |
Cmo16g00305 | 680 | Gene3D | - | 556 | 653 | IPR029048 | - | |
Cmo16g00305 | 680 | PANTHER | HEAT SHOCK PROTEIN 70KDA | 32 | 662 | IPR013126 | GO:0005524|GO:0140662 | |
Cmo16g00305 | 680 | TIGRFAM | prok_dnaK: chaperone protein DnaK | 59 | 651 | IPR012725 | GO:0005524|GO:0006457|GO:0051082 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo15g01353 | Cmo-Chr15:9263256 | Cmo16g00305 | Cmo-Chr16:1399820 | 0 | dispersed | |
Cmo16g00305 | Cmo-Chr16:1399820 | Cmo04g02760 | Cmo-Chr4:19963206 | 0 | dispersed | |
Cmo04g02123 | Cmo-Chr4:13928946 | Cmo16g00305 | Cmo-Chr16:1399820 | 0 | transposed | |
Cmo09g01125 | Cmo-Chr9:6416327 | Cmo16g00305 | Cmo-Chr16:1399820 | 0 | transposed | |
Cmo15g01524 | Cmo-Chr15:10324523 | Cmo16g00305 | Cmo-Chr16:1399820 | 0 | transposed | |
Cmo16g00305 | Cmo-Chr16:1399820 | Cmo04g00444 | Cmo-Chr4:2199041 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo16g00305 | K04043 | - | csv:101216102 | 1233.78 |