Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo16g00363 ATGGGCAGCATTGAATCCGACAGAACCGTTACCGGTCTTGCCGCCAAAGACCCGTCCGGGATTCTGTCTCCCTACACTTATACTCTCCGAAACACCGGCCCGGATGATGTTTTCATCAAAGTGATTTGCTGTGGAATCTGTCACTCCGATCTTCACCAAATCAAGAATGAGCTCGGCATGTCCAATTACCCCATGGTTCCTGGACATGAAGCGGTCGGAGAAGTGGTTGAGGTTGGATCGGAAGTGAGTCGATTCAGAGTTGGGGATTTGGTCGGTGTTGGGTGTATTGTTGGATCCTGTTCGAGTTGCGGTCCTTGTAATTCCGATAAGGAGCAGTACTGTAACAAGAAGATCTGGACCTATAATGATGTGTATCTCGACGGCCGACCCACTCAAGGTGGATTCTCCTCCGCCATGGTCGTGCACCAAAAGTTTGTGGTGAAAATCCCTGAAGGGATGTCGCCGGAGCAGGCGGCGCCGCTGTTGTGCGCGGGAGTGACGGTGTACAGCCCACTGAGCCACTTTGGACTGAAACAGAGTGGGCTAAGAGGCGGAATTTTGGGTCTGGGCGGCGTTGGGCATATGGGCGTGCAAGTGGCGAAGGGTTTAGGCCACCATGTGACGGTGATAAGCTCGTCGGAGAAGAAGAGGAAGGAAGCTCTGGAACATCTCGGCGCAGACGAGTACTTGGTCAGCTCCGACGCAACTCAAATGGAACGAGCCGTAGGCTCGCTGGATTACATCATCGACACAGTCCCTGTTTTTCATCCGCTCGAGCCGTACCTCTCTCTGCTAAAACTCGACGGCAAATTGATCATGATGGGTGTCATTAACACCCCAATGCAATTCGTTTCGCCTCTCCTTATGCTCGGGAGGAAGACGATTGCCGGGACCTTCATCGGAAGCATGACGGAGATACAAGAGGTGTTGGATTTCTTCAAAGAGAAGGAGCTGACCTCCACGATTGAAGTGATAAAGCTGGATTACATAAACAAGGCTCTGGAGAGGTTGGAGAAGAACGATGTTAGATACAGGTTCGTTGTTGATGTAGCCGGAAGTAAGTTCCCGGAGTGA 1074 51.77 MGSIESDRTVTGLAAKDPSGILSPYTYTLRNTGPDDVFIKVICCGICHSDLHQIKNELGMSNYPMVPGHEAVGEVVEVGSEVSRFRVGDLVGVGCIVGSCSSCGPCNSDKEQYCNKKIWTYNDVYLDGRPTQGGFSSAMVVHQKFVVKIPEGMSPEQAAPLLCAGVTVYSPLSHFGLKQSGLRGGILGLGGVGHMGVQVAKGLGHHVTVISSSEKKRKEALEHLGADEYLVSSDATQMERAVGSLDYIIDTVPVFHPLEPYLSLLKLDGKLIMMGVINTPMQFVSPLLMLGRKTIAGTFIGSMTEIQEVLDFFKEKELTSTIEVIKLDYINKALERLEKNDVRYRFVVDVAGSKFPE 357
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 1669071 1670855 + CmoCh16G003630.1 Cmo16g00363 399398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo16g00363 357 CDD CAD1 11 349 - -
Cmo16g00363 357 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 153 318 IPR036291 -
Cmo16g00363 357 Pfam Zinc-binding dehydrogenase 191 314 IPR013149 -
Cmo16g00363 357 Pfam Alcohol dehydrogenase GroES-like domain 34 149 IPR013154 -
Cmo16g00363 357 Gene3D - 164 320 - -
Cmo16g00363 357 Gene3D - 14 350 - -
Cmo16g00363 357 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 68 82 IPR002328 GO:0008270|GO:0016491
Cmo16g00363 357 SMART PKS_ER_names_mod 20 348 IPR020843 GO:0016491
Cmo16g00363 357 PANTHER ALDEHYDE REDUCTASE 5 355 - -
Cmo16g00363 357 PANTHER CINNAMYL ALCOHOL DEHYDROGENASE 2-RELATED 5 355 - -
Cmo16g00363 357 SUPERFAMILY GroES-like 17 181 IPR011032 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo04g00501 Cmo16g00363 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo16g00363 Cmo-Chr16:1669071 Cmo20g01090 Cmo-Chr20:10384192 3.64E-122 dispersed
Cmo01g02044 Cmo-Chr1:14317207 Cmo16g00363 Cmo-Chr16:1669071 3.77E-118 transposed
Cmo02g00969 Cmo-Chr2:5943970 Cmo16g00363 Cmo-Chr16:1669071 1.61E-97 transposed
Cmo11g01393 Cmo-Chr11:9761168 Cmo16g00363 Cmo-Chr16:1669071 0 wgd
Cmo16g00363 Cmo-Chr16:1669071 Cmo04g00501 Cmo-Chr4:2509137 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo16g00363 K00083 - csv:101222395 620.157