Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo16g00368 ATGGCTACCCTCTCGATTGGGATTCATTTGCCCCCATCGCGGCATTGGAAGAGATTTTCATTTCATTCCCACTCTCCCGTTTCACTCCCATTTCACACGAGCTATGGCTCTTCTTTGAGTAGAATCAGAGCTCCAAGGTTGCTTGGTAAGAACCTTCTCGCGCGGGCTGAAGACGAGGATAAAAGCTCTTCTTCGTTTCAGCAGCAGCAAGCTCCACCCAACTTCAGCAAACAATTGGAGGAACTCTCATCGAAGTCAGGAACATGTGATCCCTTATGCTCAGTTGATGAAATAAGCTCTCGGGATTTTGAAGATAGTTATCAGCCACAGGCTGATTTAGTGAAGGCTTTTGCAATACTTGCAGCTGCCCTTACTGGGATTGTGGCTATTAATCACTCCTGGGTTGCTGCTAATCAGGATCTTGCTATGGTGTTGCTATTTAGTATAGGATATGCTGGAATCATTTTTGAAGAAGCTCTTGCTTTCAACAAGAGTGGAGTGGGATTGTTGATGGCGGTTGGCTTGTGGGTTGTTCGAAGTATTGGGCTTCCTTATGTGCATATGGCTGCTCCATCCACCGAAATTGCTGCTTCAGAGCTAACACATGCCACAGCAGAAGTCAGTGAAATTGTGTTCTTCTTGCTTGGGGCGATGACCATAGTCGAGATCGTCGACGCCCATCAAGGATTTAAGTTGGTTACAGACAGTATAACGACTCGAAAACCACGAACTCTTCTCTGGGTGATTGGGATTGTAACCTTTTTTCTAAGTTCAATCCTTGACAACCTGACAACCACAATTATCATGGTTTCGTTATTGCGAAAACTCGTTCCTCCGTCAGAGTATCGCAAGCTACTCGGAGCTGTAATCGTTATAGCAGCTAACGCGGGCGGTGCATGGACACCTATTGGAGATGTAACCACAACCATGCTATGGATACATGGTCAGATATCAACAATGCCAACACTCAAAGACTTGTTTATACCTTCGGCTGTTTCACTTATAGTTCCGTTGTCTCTTCTGTCCCTAACAAGTGAAGTCAATGGAAAGGGACAGGATTTTTCGAACGTTATGGCGTCCGAGCAGATGGCTCCTCGTGGAAAGCTCGTCTTCTCTGTCGGTGTCGGAGCGTTGGTCTCTGTTCCAGTGTTCAAGGCCCTCACAGGTTTGCCTCCCTACATGGGTATGCTGCTTGGACTTGGAATTCTGTGGATTCTCACTGATGCAATTCACTATGGTGAATCGGAACGACAAAAGTTGAAAGTTCCTCAAGCTTTATCTCGTATCGATACGCAAGGAGCGCTATTTTTCCTCGGTATCCTTTTGTCTGTCAGCAGCTTAGAGGCTGCAGGAATCTTACGCGAGTTAGCAAACTACCTCGACGCTCATATTCCGAACACTGAACTCATTGCGAGTGCAGTCGGTGTTATATCAGCTATTATAGACAATGTCCCATTAGTTGCAGCAACAATGGGAATGTATGATCTCTCTTCCTTCGCGCAAGATTCCGAGTTCTGGCAGCTGATAGCGTTTTGTGCTGGCACTGGTGGATCCATGCTTATAATTGGATCTGCAGCTGGAGTTGCATTCATGGGGATGGAGAAGGTGGACTTCTTTTGGTACTTGAGAAAGGTTAGCGGCTTCGCCTTTGCTGGATATGCTGCTGGAATTGCTGCCTATTTAGCTCTTCATAACCTCAACACATCGCTACCTACAACCATTGCTGAGGTGCCTTCCATTATGGGATTCATAAACTGA 1758 46.19 MATLSIGIHLPPSRHWKRFSFHSHSPVSLPFHTSYGSSLSRIRAPRLLGKNLLARAEDEDKSSSSFQQQQAPPNFSKQLEELSSKSGTCDPLCSVDEISSRDFEDSYQPQADLVKAFAILAAALTGIVAINHSWVAANQDLAMVLLFSIGYAGIIFEEALAFNKSGVGLLMAVGLWVVRSIGLPYVHMAAPSTEIAASELTHATAEVSEIVFFLLGAMTIVEIVDAHQGFKLVTDSITTRKPRTLLWVIGIVTFFLSSILDNLTTTIIMVSLLRKLVPPSEYRKLLGAVIVIAANAGGAWTPIGDVTTTMLWIHGQISTMPTLKDLFIPSAVSLIVPLSLLSLTSEVNGKGQDFSNVMASEQMAPRGKLVFSVGVGALVSVPVFKALTGLPPYMGMLLGLGILWILTDAIHYGESERQKLKVPQALSRIDTQGALFFLGILLSVSSLEAAGILRELANYLDAHIPNTELIASAVGVISAIIDNVPLVAATMGMYDLSSFAQDSEFWQLIAFCAGTGGSMLIIGSAAGVAFMGMEKVDFFWYLRKVSGFAFAGYAAGIAAYLALHNLNTSLPTTIAEVPSIMGFIN 585
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 1687401 1693061 - CmoCh16G003680.1 Cmo16g00368 399403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo16g00368 585 Pfam Citrate transporter 154 514 IPR004680 GO:0016021|GO:0055085
Cmo16g00368 585 PANTHER SODIUM/PROTON ANTIPORTER 1-RELATED 1 582 IPR045016 GO:0006814|GO:0015297
Cmo16g00368 585 PANTHER BNAC03G40960D PROTEIN 1 582 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo16g00368 - - csv:101221448 989.564