Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo16g00380 ATGACGAGCAGTTTCGCGAATCAAAGAGGGTCCCGATCATGGGCCACTGATGAGGAGTTGCCAGTGTCTAGTGGGGTTCCGATTCCACCCAAGAAAAAATGGTCAAATGCGATGCCTCTGTTCATCGCTCTCGTGGTCATAGCAGAAATTATCTTTCTGGGTCGGCTTGATGTGGCGAAAAATGTAGCCATGGTCGATTCATGGGCCGATTTATTCTACCACTCGTCGTCTTCTCGTGCAATGATCGGTGGAGATGATGGTTTACATTCCCGGTTACTCGACGGCGATCGGATCTCGGAATTGAGGACTTGCGAGGAGTGGTTGGAGAAAGAAGACGCTGTAACGTATTCTAGGGACTTCCAAAAGAAGCCGATATTGGTTTCTGGTTTTGATGAGGGGAGGAAATCTTGTGCCGTAGGATGTGAATTTGAGGTCCATCCAAGTAAAGATTGGGATGCTGCTTTTGGTTTAAATCGTCAGAGTGGAAAGCCTTCAATTATTCGATCCATGGAATCATCTCTATATTATCCAGATAACAATATTGCCCAGGCACGACGGAATGGATATAGTATAGTAATGACCACCAGTCTCTCATCAGATGTACCTGTTGGATACTTCTCCTGGGCCGAGTATGATATCATGGCACCAGTGCAGGCTAAGACTGAGAATTCCCTTGCAGCTGCTTTCATTTCAAATTGTGATGCTCGTAACTTCCGCTTGGAAGCTCTTGTGGCTCTTGAAAAACTGAACGTCACAATCGATTCATATGGTGCTTGCCACAGAAATCGTGATGGAAGCACAGTGAACAAACTAGAGACTCTAAAGCACTACAGGTTCAGCTTGGCTTTTGAGAATTCCAACGAGGAAGATTATGTGACTGAAAAATATTTCCAATCTCTAGTTGCTGGAGCCGTTCCAGTGGTTATTGGAGCTCCAAACATTCAAGAGTTTGCTCCTTCACCTGCTTCGCTTTTGCATATCAGGAAGCTTTCAGATGTTGAGTCAGTTGCCAACTCTATGAAATACCTTGCGGCAAACCCTGAGGCATTCAACAACTCATTGAGGTGGAAATATGAGGGTCCATCTGACTCTTTCAAGGCACTATTGGATATGGCAGCAGTTCATTCGTCATGTCGCCTTTGCATTCATTTGGCAACTAGTATTCATGAGACAGAAGAAAAGGGTCTAGCATTTAAAAATCGACCCTGTAAATGCACCAGAGGTCCGGAGACCGTTTATCACTTATATGTGAGGGAAAGAGGAAGGTTTGATTCAGAGTCCATTTTCTTGAGGTCTAGTAATCTGACGGTTGAAGGGCTGGCGTCAGCAGTGGTTTCGAAGTTCAAATCGCTGAAGCACGAACCGATTTGGAAGCAGGAGAGGCCTAAGAGCTTAAAAGGAGGGGACGAATTAAGGTTGTATAAGATATACCCAGTTGGGTTGACACAGAGGCAAGCTTTATATACCTTCAAATTTCAGGGGGACTCTGATCTCAGAAGACACGTGGAAGATAACCCGTGTGCTAAATTTGAAGCAATTTTTGTATAG 1548 44.83 MTSSFANQRGSRSWATDEELPVSSGVPIPPKKKWSNAMPLFIALVVIAEIIFLGRLDVAKNVAMVDSWADLFYHSSSSRAMIGGDDGLHSRLLDGDRISELRTCEEWLEKEDAVTYSRDFQKKPILVSGFDEGRKSCAVGCEFEVHPSKDWDAAFGLNRQSGKPSIIRSMESSLYYPDNNIAQARRNGYSIVMTTSLSSDVPVGYFSWAEYDIMAPVQAKTENSLAAAFISNCDARNFRLEALVALEKLNVTIDSYGACHRNRDGSTVNKLETLKHYRFSLAFENSNEEDYVTEKYFQSLVAGAVPVVIGAPNIQEFAPSPASLLHIRKLSDVESVANSMKYLAANPEAFNNSLRWKYEGPSDSFKALLDMAAVHSSCRLCIHLATSIHETEEKGLAFKNRPCKCTRGPETVYHLYVRERGRFDSESIFLRSSNLTVEGLASAVVSKFKSLKHEPIWKQERPKSLKGGDELRLYKIYPVGLTQRQALYTFKFQGDSDLRRHVEDNPCAKFEAIFV 515
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 1749715 1758155 - CmoCh16G003800.1 Cmo16g00380 399415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo16g00380 515 PANTHER FUCOSYLTRANSFERASE-LIKE PROTEIN-RELATED 33 492 - -
Cmo16g00380 515 PANTHER ALPHA- 1,3 -FUCOSYLTRANSFERASE 33 492 IPR001503 GO:0006486|GO:0008417|GO:0016020
Cmo16g00380 515 MobiDBLite consensus disorder prediction 1 26 - -
Cmo16g00380 515 Pfam Glycosyltransferase family 10 (fucosyltransferase) C-term 222 389 IPR001503 GO:0006486|GO:0008417|GO:0016020
Cmo16g00380 515 Gene3D - 168 364 IPR038577 -
Cmo16g00380 515 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 109 388 - -
Cmo16g00380 515 MobiDBLite consensus disorder prediction 1 18 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo04g02596 Cmo-Chr4:18971173 Cmo16g00380 Cmo-Chr16:1749715 2.73E-14 dispersed
Cmo15g00565 Cmo-Chr15:2693178 Cmo16g00380 Cmo-Chr16:1749715 7.55E-15 dispersed
Cmo16g00380 Cmo-Chr16:1749715 Cmo19g00620 Cmo-Chr19:6797917 0 wgd
Cmo16g00380 Cmo-Chr16:1749715 Cmo04g00523 Cmo-Chr4:2598170 2.57E-17 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo16g00380 K00753 - csv:101202837 889.026