Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo16g00423 | ATGGGCAGAATACCATGTTCTTTTTGCCGGAGCAGTAGTCGTTGCCGCCCTAAGAAGGCGGCTCAGTCGTCACTGTCCCCATTGCCTCAGCCACCTCCGCAGACTGGCGTCTGCTCTCCTCCCATTAACAATAATGGCAGCGGCTTGGTCGGTGGTGGTGGTGGTGGGGCCATGGGAAAGGTGAAGAAGAAGGCTGGAGGAGCTAGGCTGTGGATGCGTCTTGACAGGTGGGGGCAGACGGAGCTTATAGAGTGGGACAAGAGCGCCATAATCCGGCGTGCTGCAATTCCGGCCAGGGATTTGAGGATTCTTGGTCCTGTTTTCTCACAATCCTCCAACATACTCGGTAAGTTTATATTTTACTCTGCAATCAGTTTTGAACTATGGGTTTACTCTGTAGAAGTGCTGTTTGTTGCCTATCTTTCCAGGGAAAAGGCCATGGTCGTTAGTTTAGAATTCATAAAAGCTATAGTTACTGCTGAAGAAGTTCTACTACTTGACCCTCTTTGCCAAGAGGTTATTCCATTTGTGGATCGACTAAGGAAGCTACTTGCTAAGATGAGTTCATCTCATGTTGAAAATGATGTTAATGTTTCGAGAGGAGGAAAGCGGTTGCCAGTTTCCGAAGCTGTTGATGAGCAGTATGAGCTGCCGTTCGAGTTTCAAGTTCTTGAAATTGCGTTGGAGGTTGTTTGCATATACTTAGATTCCACCGTGAAAGACCTTGAGAGAGATGCTTATCCAGTCCTGGACGAACTGGCTATGAATGTCAGCACCAAGAATCTAGAACGTGTGAGGAGCTTGAAAAGTAATCTTACTCGTATTCTTGCACGCGTTCAGAAGGTGCGGGACGAGATAGAACATCTATTAGATGACAACGAAGATATGGGACAACTATATTTGACAAGAAAATGGATGCAGAATCAGCAGTCCGATGCTTCCCTGGGAGTAGTCGCTTCCAACAGCACCACTGTCACCGTTCCTCATCTGCGTCGACTTAGTTCCACCAGGAGCGGAAGTGCAGTAACCAGCAATCTTTCGGATGATAACGACGTAGAGGATCTGGAAATGTTGCTCGAGGCATACTTTATGCAGTTGGATGGGACTCGTAACAGGATATTATCGGTTAGGGAATACATCGACGACACCGAGGATTACGTCAACATTCAACTTGACAGTCAAAGAAACGAACTCATTCAGTTTCAGTTGACACTGACCATTGCTTCATTTGCCATAGCTGTCGAAACCTTAATCGCCGGGTTGTTTGGTATGAACATCCCTTGTATATTGTACGAGACGAACGGGATATTCGAGTACTTTGTCGGAGGTGCTTCAGCAGGGTGTTTGTTGATTTTCCTGCTTATTTTTGGCGAATTGATTTGTGTTCGAGCGAGCAGCATAAACGTGTACATGGCACAATTTCTTATCATGTTACAGGAAAAGGAGTTTCTTGTATTTCTTACTATGGAGAATTCTAAAGGGTCATCCAACGTCAGAAATTTTATGAGTTCTGGGAAACATGCACTACTCCCTCCCAAAAGTCCCTTTCCGAGCGTTTCTCCATCATATACTGAATTTGTTCCTAACACTGTTATCGGTGCAAAAGCTGTTCAGAGACCACGAGATGGTAACAGCTACCATCAAAGAACTTCTTCCGAAAGCATTTTAATAGAGGAGCAGCCTTCTTGGCTTGATGATCTCCTCAATGAGCCAGAGACCCCTGTTCGCAGAGTTGGTCATCGACGTTCGTCGAGTGACTCCTTTGCATATACAGATGCTGCCAATGTTAATTTTGATAGTATCACGCAAGAAGATTTCAAATATGCAAATGCAATTCCTGGACACTCATGGTTATCTCAAGAATTTGATCATCAAAGGGATGCAAGGCATGCTTCATTCTATACTGAAGCGAATGTAACAAAACAGAAGAATAGGGTGTGGGAATCATCTTTATCTACCATGAATAATCCTATTGCTCTTCATTCTCCCAGGGAGAACATTGTTATTCATACCTCAGGACCATTAAGCGCTCCGCAGGAAGCAGATGGTTTGCCTTCTACAGCAAGTGAAAAGCAGGATCCAGTTGAGTCTGGTTCACACGATCCAAAAGTCTCTTCTGAAAGGAAAGATGTTTCTCATGGAAAATCATCTTCGTCTGATACAGAAAATAAACGCGCCAAACAGCAATTTGCTCAGCGTTCAAGGGTTCGGAAACTTCAATATATAGCTGAGCTTGAAAGGAAAGTACAAGCTCTGCAGGCAGAGGGCTCTGAAGTCTCAGCTGAGCTTGAATTTCTCAACCAGCAGCATCTTATTCTTAGCATGGAAAACAATGCTCTCAAGCAGCGGTTAGAGAATTTAGCTCAAGAGCAGCTAATTAAATACTTACAATTTCCTCTTATTTCTACAAGAAAGCTAAGAGATGAACTATGTCCAGTGGAGCAGGAAGTACTGGAGAGGGAGATTGGAAGGCTAAGAGCTATGCACCAGCAGCAACATCAGCAGCAGCAACATCAGCAGCAGCAACAACCTCAACCACTACGACCCTCTTCTAGTCATCGACGTAGTTCGAGCAAAGACCTCGACAATCAATTTGCCAATCTTTCTTTGAAGCAAAAGGATTCTGGTTCAAGTCGTGACCCGGTAACAGGTCCAGTGCGCAGTTAG | 2667 | 44.77 | MGRIPCSFCRSSSRCRPKKAAQSSLSPLPQPPPQTGVCSPPINNNGSGLVGGGGGGAMGKVKKKAGGARLWMRLDRWGQTELIEWDKSAIIRRAAIPARDLRILGPVFSQSSNILGKFIFYSAISFELWVYSVEVLFVAYLSREKAMVVSLEFIKAIVTAEEVLLLDPLCQEVIPFVDRLRKLLAKMSSSHVENDVNVSRGGKRLPVSEAVDEQYELPFEFQVLEIALEVVCIYLDSTVKDLERDAYPVLDELAMNVSTKNLERVRSLKSNLTRILARVQKVRDEIEHLLDDNEDMGQLYLTRKWMQNQQSDASLGVVASNSTTVTVPHLRRLSSTRSGSAVTSNLSDDNDVEDLEMLLEAYFMQLDGTRNRILSVREYIDDTEDYVNIQLDSQRNELIQFQLTLTIASFAIAVETLIAGLFGMNIPCILYETNGIFEYFVGGASAGCLLIFLLIFGELICVRASSINVYMAQFLIMLQEKEFLVFLTMENSKGSSNVRNFMSSGKHALLPPKSPFPSVSPSYTEFVPNTVIGAKAVQRPRDGNSYHQRTSSESILIEEQPSWLDDLLNEPETPVRRVGHRRSSSDSFAYTDAANVNFDSITQEDFKYANAIPGHSWLSQEFDHQRDARHASFYTEANVTKQKNRVWESSLSTMNNPIALHSPRENIVIHTSGPLSAPQEADGLPSTASEKQDPVESGSHDPKVSSERKDVSHGKSSSSDTENKRAKQQFAQRSRVRKLQYIAELERKVQALQAEGSEVSAELEFLNQQHLILSMENNALKQRLENLAQEQLIKYLQFPLISTRKLRDELCPVEQEVLEREIGRLRAMHQQQHQQQQHQQQQQPQPLRPSSSHRRSSSKDLDNQFANLSLKQKDSGSSRDPVTGPVRS | 888 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
16 | 1976093 | 1985856 | + | CmoCh16G004230.1 | Cmo16g00423 | 399458 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo16g00423 | 888 | MobiDBLite | consensus disorder prediction | 673 | 732 | - | - | |
Cmo16g00423 | 888 | MobiDBLite | consensus disorder prediction | 694 | 729 | - | - | |
Cmo16g00423 | 888 | Gene3D | - | 58 | 168 | - | - | |
Cmo16g00423 | 888 | CDD | bZIP_plant_RF2 | 724 | 770 | IPR044759 | GO:0003700|GO:0006355 | |
Cmo16g00423 | 888 | Coils | Coil | 265 | 292 | - | - | |
Cmo16g00423 | 888 | PANTHER | RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL | 5 | 116 | IPR039204 | - | |
Cmo16g00423 | 888 | PANTHER | RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL | 141 | 457 | IPR039204 | - | |
Cmo16g00423 | 888 | SMART | brlzneu | 720 | 779 | IPR004827 | GO:0003700|GO:0006355 | |
Cmo16g00423 | 888 | Gene3D | Magnesium transport protein CorA, transmembrane region | 176 | 398 | - | - | |
Cmo16g00423 | 888 | Gene3D | - | 722 | 776 | - | - | |
Cmo16g00423 | 888 | SUPERFAMILY | Magnesium transport protein CorA, transmembrane region | 403 | 454 | IPR045863 | - | |
Cmo16g00423 | 888 | MobiDBLite | consensus disorder prediction | 828 | 852 | - | - | |
Cmo16g00423 | 888 | MobiDBLite | consensus disorder prediction | 20 | 42 | - | - | |
Cmo16g00423 | 888 | SUPERFAMILY | Leucine zipper domain | 731 | 773 | IPR046347 | GO:0003700|GO:0006355 | |
Cmo16g00423 | 888 | MobiDBLite | consensus disorder prediction | 827 | 888 | - | - | |
Cmo16g00423 | 888 | Coils | Coil | 735 | 790 | - | - | |
Cmo16g00423 | 888 | CDD | Mrs2_Mfm1p-like | 71 | 463 | IPR039204 | - | |
Cmo16g00423 | 888 | PANTHER | MAGNESIUM TRANSPORTER MRS2-4-RELATED | 5 | 116 | - | - | |
Cmo16g00423 | 888 | PANTHER | MAGNESIUM TRANSPORTER MRS2-4-RELATED | 141 | 457 | - | - | |
Cmo16g00423 | 888 | MobiDBLite | consensus disorder prediction | 861 | 882 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cmo04g00576 | Cmo16g00423 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo04g01948 | Cmo-Chr4:9969248 | Cmo16g00423 | Cmo-Chr16:1976093 | 7.10E-112 | dispersed | |
Cmo11g01879 | Cmo-Chr11:13083836 | Cmo16g00423 | Cmo-Chr16:1976093 | 3.49E-24 | dispersed | |
Cmo16g00423 | Cmo-Chr16:1976093 | Cmo17g00183 | Cmo-Chr17:1083418 | 2.27E-92 | dispersed | |
Cmo19g00057 | Cmo-Chr19:317618 | Cmo16g00423 | Cmo-Chr16:1976093 | 6.12E-74 | dispersed | |
Cmo19g00556 | Cmo-Chr19:6400264 | Cmo16g00423 | Cmo-Chr16:1976093 | 2.85E-65 | dispersed | |
Cmo19g00926 | Cmo-Chr19:8586158 | Cmo16g00423 | Cmo-Chr16:1976093 | 2.15E-23 | dispersed | |
Cmo04g00576 | Cmo-Chr4:2876910 | Cmo16g00423 | Cmo-Chr16:1976093 | 0 | transposed | |
Cmo16g00423 | Cmo-Chr16:1976093 | Cmo04g00575 | Cmo-Chr4:2868516 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo16g00423 | K16075 | - | csv:101203254 | 642.114 |