Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo16g00430 | ATGGGTTCCGTTTGTTGTAAGCCTTCTGCTATTGAAGATAGCAAGGAAAGTCCAAGGGAGAGGCTGTCGAGTAAGACCTCGTCTGACCTGCGTGTGGCGAGAGTGACTTCATCGACAAGGGAAGAAGTGTATCGATCTAAAGATCAGCACGATGGTAATGATGCAAGAGTGATGTTGATTGACAAGCAGGTTAATGGGTCGGGCCGAATGCAGGGTGAGAATTTTGAGAGGAAGAGGGAGAAGATGGAGCATATGGGTGCTCAACATCCTTCAATGGGTAGAATTCCGAAGGCAGCTGAGGGAGACCACGTTGCTGCAGGGTGGCCTCCATGGCTGGCTGCAGTTGCTGGAGAGGCAATCAGAGGCTGGCTACCCCGACGAGCTGATTCTTTCGAGAAATTGGATAAAATTGGCCAAGGAACTTATAGTAATGTATATAGGGCTCGTGACCTTGACCAAAAGAAAATCGTTGCTTTGAAGAAAGTAAGGTTCGACAACTTAGAACCCGAGAGCGTCCGCTTTATGGCGAGGGAAATTCACATATTGCGTAGACTCGATCATCCAAATGTAATAAAGCTGGAGGGTCTAGTCACATCAAGGATGTCTTGCAGCCTTTATCTTGTTTTCGAGTACATGGAACATGACTTGGCAGGACTTGCTTCACATCCTGGCGTGAAGTTTACAGAGGCGCAGGTCAAGTGTTACATGCAGCAACTTTTACGGGGACTCGATCATTGTCACAGTCGTGGAGTTCTACATCGTGACATAAAGGGCTCGAACCTTTTAATTGACAACAATGGCATCTTGAAAATTGCTGACTTTGGTCTGGCAAGTCTTTTTGATATCCACCAAAATCAGCCACTGACAAGTCGGGTCGTGACTCTTTGGTATCGACCGCCTGAGCTTTTACTTGGCGCTACTTATTATGGTATAGCTGTAGATTTATGGAGTACTGGCTGCATACTTGCTGAATTGTATGCTGGGAAGCCCATTATGCCAGGAAGAACAGAGGTGGAACAGCTACATAAAATATTTAAACTCTGTGGCTCTCCTTCAGAGGATTATTGGAGAAAATCAAGGTTGCCACATGCAACCATATTTAAGCCCCAACAGCCCTATCGACGTTGTGTTGCAGACACGTTTAAGGATTTCCCTGCACCAGCTTTAGCTCTCATTGAGACGTTACTCTCGGTAGATCCTGCTGATCGTGGCTCTGCTGCTCTCGCCCTTAAAAGTGAATTCTTTTCAACAAAGCCTCTTCCTTGTGATTCTTCAAGCTTGCCAAAGTATCCTCCCAGCAAAGAATTGGATGCCAAGATAAGGGATGAGGAAGCTAGAAGACAAGGAGCAGTAGGAAGCAAGGGACACCGACTTGACCTGCAAAGGAAAAATGGTGAGTCTCGAGCCGTCCCTGCACCTGATGCCAATGCCGAGTTAGCCTCATCAATGCAGAAACGACAAGGTCAGTTCAATTCGAAGAGCCGGAGTGAGAAGTTTAACCCACATCTAGAAGAAGCGTCGGGTTTTCCTATCGATCCACCTAGACCTTCACAAGGAGCAGAAAGAATGGATTCTCACGTGCGTCATCCTAAGAAAGCCTCACATTCAGGGCCACTTGCTCAGCGGGCTGCTTGGGCAAAGGCTAGTAAGAACTCCGATGACGCTCCCAAAATGTCAACCGGGGCCGAAACGTTCGCAACTTCAGGACTAGTTGCAGCTAGAAGAAGTGTGTTGGCTGAAGATTGCAGGGAAAAGCCTGACTCTTCACAAGGAGAGGTTAAAAAACTAATTGGCAGGTTTCCCGGTTCCTTCAAAGAAACCTCGGAGTCGTCGATGCTACCGGGCCAGAAGTTCTCAAATCACAGTATTGTAGGCTCACATGACAAAGAGAGAAGCAGCACCAAAGACCCTATAGTTCCAGTAAAGCTGAGCTATTTGCTCTTGCCATGGTTTTCTGAGTGTCTGTTCATGTACATAATACTAATACAACAGGTGGGTTATGGCTCAAACGGTCATAAGATTCACTACTCTGGTCCATTACTGGTTCCCTCAAGCAACATGGACCAAATGTTTAAGGACCACGATCGCCATATCCAAGAAGCAGTAAGACGAGCTCGGCTCGACAAGGCAAAGGCACGGAAGATTCAAGCGGACGGGAAACAGATGTCAGCCAATTCATTATTCGTCTCCGGTCATTAA | 2199 | 47.02 | MGSVCCKPSAIEDSKESPRERLSSKTSSDLRVARVTSSTREEVYRSKDQHDGNDARVMLIDKQVNGSGRMQGENFERKREKMEHMGAQHPSMGRIPKAAEGDHVAAGWPPWLAAVAGEAIRGWLPRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHPNVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGVKFTEAQVKCYMQQLLRGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASLFDIHQNQPLTSRVVTLWYRPPELLLGATYYGIAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRKSRLPHATIFKPQQPYRRCVADTFKDFPAPALALIETLLSVDPADRGSAALALKSEFFSTKPLPCDSSSLPKYPPSKELDAKIRDEEARRQGAVGSKGHRLDLQRKNGESRAVPAPDANAELASSMQKRQGQFNSKSRSEKFNPHLEEASGFPIDPPRPSQGAERMDSHVRHPKKASHSGPLAQRAAWAKASKNSDDAPKMSTGAETFATSGLVAARRSVLAEDCREKPDSSQGEVKKLIGRFPGSFKETSESSMLPGQKFSNHSIVGSHDKERSSTKDPIVPVKLSYLLLPWFSECLFMYIILIQQVGYGSNGHKIHYSGPLLVPSSNMDQMFKDHDRHIQEAVRRARLDKAKARKIQADGKQMSANSLFVSGH | 732 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
16 | 2044031 | 2048013 | + | CmoCh16G004300.1 | Cmo16g00430 | 399465 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo16g00430 | 732 | MobiDBLite | consensus disorder prediction | 1 | 52 | - | - | |
Cmo16g00430 | 732 | MobiDBLite | consensus disorder prediction | 605 | 622 | - | - | |
Cmo16g00430 | 732 | MobiDBLite | consensus disorder prediction | 12 | 27 | - | - | |
Cmo16g00430 | 732 | Gene3D | Transferase(Phosphotransferase) domain 1 | 214 | 454 | - | - | |
Cmo16g00430 | 732 | MobiDBLite | consensus disorder prediction | 445 | 464 | - | - | |
Cmo16g00430 | 732 | SUPERFAMILY | Protein kinase-like (PK-like) | 125 | 422 | IPR011009 | - | |
Cmo16g00430 | 732 | MobiDBLite | consensus disorder prediction | 35 | 52 | - | - | |
Cmo16g00430 | 732 | MobiDBLite | consensus disorder prediction | 605 | 634 | - | - | |
Cmo16g00430 | 732 | PANTHER | CELL DIVISION PROTEIN KINASE | 1 | 707 | - | - | |
Cmo16g00430 | 732 | ProSiteProfiles | Protein kinase domain profile. | 131 | 415 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cmo16g00430 | 732 | Pfam | Protein kinase domain | 131 | 415 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cmo16g00430 | 732 | SMART | serkin_6 | 131 | 415 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cmo16g00430 | 732 | MobiDBLite | consensus disorder prediction | 445 | 561 | - | - | |
Cmo16g00430 | 732 | CDD | STKc_CDK9_like | 131 | 415 | - | - | |
Cmo16g00430 | 732 | ProSitePatterns | Protein kinases ATP-binding region signature. | 137 | 160 | IPR017441 | GO:0005524 | |
Cmo16g00430 | 732 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 251 | 263 | IPR008271 | GO:0004672|GO:0006468 | |
Cmo16g00430 | 732 | Gene3D | Phosphorylase Kinase; domain 1 | 118 | 213 | - | - | |
Cmo16g00430 | 732 | PANTHER | CYCLIN-DEPENDENT KINASE | 1 | 707 | - | - | |
Cmo16g00430 | 732 | MobiDBLite | consensus disorder prediction | 480 | 496 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cmo04g00583 | Cmo16g00430 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo06g00920 | Cmo-Chr6:6618306 | Cmo16g00430 | Cmo-Chr16:2044031 | 0 | dispersed | |
Cmo09g01213 | Cmo-Chr9:9362476 | Cmo16g00430 | Cmo-Chr16:2044031 | 1.02E-147 | dispersed | |
Cmo09g01297 | Cmo-Chr9:11502373 | Cmo16g00430 | Cmo-Chr16:2044031 | 0 | dispersed | |
Cmo16g00430 | Cmo-Chr16:2044031 | Cmo20g00222 | Cmo-Chr20:1063611 | 3.46E-143 | dispersed | |
Cmo07g00794 | Cmo-Chr7:3633060 | Cmo16g00430 | Cmo-Chr16:2044031 | 7.41E-145 | transposed | |
Cmo20g00223 | Cmo-Chr20:1073241 | Cmo16g00430 | Cmo-Chr16:2044031 | 1.88E-10 | transposed | |
Cmo16g00430 | Cmo-Chr16:2044031 | Cmo04g00583 | Cmo-Chr4:2911153 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
74958 | PF00069 | Pkinase | 3.10E-68 | CL0016 | Cmo | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo16g00430 | - | - | csv:101222182 | 1318.14 |