Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo16g00447 ATGAAACAGCGGCTTCGTTTTGGTTGTGCTGTCATTTCTATAACCATGTTCATTGATGGTGCTACGCCTCCTCTCTCTGTTCCTCTTATTCCTTTTCTTGCCTTTTACTTAACCTTCTATTTCTACTCCTTCTCGCCCCTCCATGCCGGACGCTATCTGTTGCTTCTCCACTGGAAGGGAAATCATCCGCATTCTGGTTGGATACGGATGAGTCCAGCAAGTTGTTTTTGGACAATATTCAATCAACGGAAGGTGAAACATGTTTCAAGCAATGGAGAACAGGTACACGGAAAGACAGGAAAATCCAATGGTTCCCCTAATGGGAAGAGTGAAGATTTAGCTGCAACTCGAATTCAAAATGCATTTCGCTCATTTACGGCCAGAAAGATTGTACATGATTCGAAAGGGCCAGAGAGGTGCCAGGTTCTAATTCAAGGTGAAACGGCTACAAAACAAGTGTTAAGCTTCATTCATTCATGGAGCAGAATGCAGCAAGAAATTAGAACACGTAGACTCTGTATGGTCACAGAATATCGAGTCAAACAAAAGAAACAGGAAAATCAGCTGAAGCTTGAGGCTAAAATTCATGAACTTGAAGTAGAATGGTGCGGTGGATCTGAAACAAAGGAGGAAATACTTTTCAAGATTCAGCATCGAGAAGAAGCTGCTGTGAGAAGGGAGCGTGCTATGGCGTATGCATTCTCTCATCAGTGGAGGGCCAATTCCATCTTAGATCTAAATCCGGCTTCATACAGCCTTGACAAAGAGAACTGGGGTTGGAGCTGGAAGGAGAGGTGGATTGCTGCTCGGCCATGGGAGATCCGAGCTAATACACATCCCACCATTCCAAAGAAGGTCCAGACGAAGCAAAGAAGCAAACTCAATGAAATAACATATCAACCGGGGTCTAAGGTCTCAACCTCAGCCAATCATTCTTTGTCAAACAAGGGGAGTTCAAAGGCTAGAAATTCATATATGCCCAAATGA 987 43.87 MKQRLRFGCAVISITMFIDGATPPLSVPLIPFLAFYLTFYFYSFSPLHAGRYLLLLHWKGNHPHSGWIRMSPASCFWTIFNQRKVKHVSSNGEQVHGKTGKSNGSPNGKSEDLAATRIQNAFRSFTARKIVHDSKGPERCQVLIQGETATKQVLSFIHSWSRMQQEIRTRRLCMVTEYRVKQKKQENQLKLEAKIHELEVEWCGGSETKEEILFKIQHREEAAVRRERAMAYAFSHQWRANSILDLNPASYSLDKENWGWSWKERWIAARPWEIRANTHPTIPKKVQTKQRSKLNEITYQPGSKVSTSANHSLSNKGSSKARNSYMPK 328
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 2143563 2149487 + CmoCh16G004470.1 Cmo16g00447 399482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo16g00447 328 MobiDBLite consensus disorder prediction 281 328 - -
Cmo16g00447 328 ProSiteProfiles IQ motif profile. 111 139 IPR000048 GO:0005515
Cmo16g00447 328 PANTHER IQ-DOMAIN 5-RELATED 87 320 - -
Cmo16g00447 328 MobiDBLite consensus disorder prediction 89 111 - -
Cmo16g00447 328 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 87 320 - -
Cmo16g00447 328 Coils Coil 181 201 - -
Cmo16g00447 328 MobiDBLite consensus disorder prediction 280 328 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo07g00202 Cmo-Chr7:1025018 Cmo16g00447 Cmo-Chr16:2143563 8.68E-72 dispersed
Cmo16g00447 Cmo-Chr16:2143563 Cmo11g00931 Cmo-Chr11:4836470 1.56E-32 dispersed
Cmo16g00447 Cmo-Chr16:2143563 Cmo10g00895 Cmo-Chr10:4380090 9.35E-34 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo16g00447 - - csv:101206595 434.106