Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo16g00481 ATGCCGCAAGATCATCCGAAGAAGGAGGCCAAAGAAATCAAGTTTTTTACTGAATATGGGGATGCTAATAGGTATAAGGTTCTTGAAGTTATTGGAAGGGGAAGTTACGGAGTTGTTTGTTCTGCTATTGACATGCATACTAGAGAGAAAGTTGCAATAAAGAGAATTCATGATATTTTTTATCACGCATCGGATGCTATTCGAATCCTTCGTGAAGTTAAGTTGCTTAGATTGTTACGGCATCCTGATATCGTCGACATCAAGCATATTATGCTACCACCTTCTAAAAAGGAATTTAAGGACATTTATGTGGTTTGTGAGCTTATGGAATCTGATCTTCATCAAGTTATTAAAGCAAACGACGACTTGACCCGTGAACATCATCAATTCTTTCTCTACCAAATGCTACGTGCTTTGAAATTCATGCATACAGGTCCGTTGTTTCTTTTGTTGATACATTACATGTACTCCCCACTTTTGTTTCATCTGGTTGGGGTGCTTATAGTCAAGGTTGTGTTTGCAGCGAATGTGTATCACAGAGACCTGAAGCCGAAGAATATACTGGCAAATGCCAATTGCAAGCTTAAAATTTGCGATTTCGGGCTTGCAAGAGTTGCTTTCAGTGACACTCCAACCACTGTATTTTGGACAGACTACGTCGCTACTAGATGGTACCGAGCTCCGGAGTTGTGTGGATCATTCTCTTCCAAGGTAGGCAGCAAACTATAA 729 40.19 MPQDHPKKEAKEIKFFTEYGDANRYKVLEVIGRGSYGVVCSAIDMHTREKVAIKRIHDIFYHASDAIRILREVKLLRLLRHPDIVDIKHIMLPPSKKEFKDIYVVCELMESDLHQVIKANDDLTREHHQFFLYQMLRALKFMHTGPLFLLLIHYMYSPLLFHLVGVLIVKVVFAANVYHRDLKPKNILANANCKLKICDFGLARVAFSDTPTTVFWTDYVATRWYRAPELCGSFSSKVGSKL 242
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 2304256 2306415 + CmoCh16G004810.1 Cmo16g00481 399516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo16g00481 242 SUPERFAMILY Protein kinase-like (PK-like) 19 232 IPR011009 -
Cmo16g00481 242 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 9 237 - -
Cmo16g00481 242 ProSitePatterns Protein kinases ATP-binding region signature. 31 54 IPR017441 GO:0005524
Cmo16g00481 242 Gene3D Transferase(Phosphotransferase) domain 1 111 144 - -
Cmo16g00481 242 Gene3D Phosphorylase Kinase; domain 1 22 110 - -
Cmo16g00481 242 Gene3D Transferase(Phosphotransferase) domain 1 168 234 - -
Cmo16g00481 242 Pfam Protein kinase domain 25 144 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo16g00481 242 Pfam Protein kinase domain 170 231 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo16g00481 242 SMART serkin_6 25 240 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo16g00481 242 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 9 237 - -
Cmo16g00481 242 ProSiteProfiles Protein kinase domain profile. 25 242 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo16g00481 Cmo-Chr16:2304256 Cmo11g02038 Cmo-Chr11:13860920 1.34E-116 dispersed
Cmo16g00481 Cmo-Chr16:2304256 Cmo04g00702 Cmo-Chr4:3484679 8.21E-137 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
74960 PF00069 Pkinase 1.30E-21 CL0016 Cmo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo16g00481 - - dzi:111275978 379.793