Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo16g00499 | ATGGCGGACGAAGTGAAACTGCTGGATTTCTGGCCGAGCATGTTTGGGATACGAGTTAGAATAGCCCTGGCCGAGAAGGGCGTAGCGTATGAATACATGGAACAAGATCTCAGGAACAAGAGCCCTTTGCTGTTGCAGATGAACCCAGTTCACAAAAAGATCCCTGTTCTTGTCCATAATGGAAGACCCATTTGTGAATCTTCCATTATCGTTCAGTACATCGATGAAGTTTGGAAGGACAAAGCGCCTCTCCTGCCGTCTGATCCTTATCACAGGGCTCAGGCCAGATTCTGGGTGGATTTCATCGACAAGAAGGAGCTGATTGGAGTTCTGAAGCAGCTGGAAGAGGTTCTAGGGGAGAAGGGTTTCTTCGGAGGGGAGCGTTTGGGGTTTGTAGACATTGCTTTGATTGGATTCCACAGTTGGTTTTATAGCTATGAGGCGTTTGGTAAGTTGAGCATAGAGGCTGAGTGTCCCAAGATAATGGGTTGGGCGAAGAGATGCTTGGAGAAGGAGAGTGTTTCCAAGTCCTTGCCTGACTCCAAGAAGGTCTATGACTTTGCGTATCTGGAGGTCATTCCGGATGGAGCTGTTCTGTTTTCAAATGCTGTTTCTTTTGTTAAACTTACGGGGATTCATTAA | 642 | 47.04 | MADEVKLLDFWPSMFGIRVRIALAEKGVAYEYMEQDLRNKSPLLLQMNPVHKKIPVLVHNGRPICESSIIVQYIDEVWKDKAPLLPSDPYHRAQARFWVDFIDKKELIGVLKQLEEVLGEKGFFGGERLGFVDIALIGFHSWFYSYEAFGKLSIEAECPKIMGWAKRCLEKESVSKSLPDSKKVYDFAYLEVIPDGAVLFSNAVSFVKLTGIH | 213 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
16 | 2411394 | 2414595 | + | CmoCh16G004990.1 | Cmo16g00499 | 399534 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo16g00499 | 213 | SFLD | Glutathione Transferase (cytosolic) | 2 | 105 | IPR040079 | - | |
Cmo16g00499 | 213 | SFLD | Main.3: Omega- and Tau-like | 2 | 105 | IPR045073 | - | |
Cmo16g00499 | 213 | PANTHER | S-TRANSFERASE TAU 22, PUTATIVE-RELATED | 104 | 189 | - | - | |
Cmo16g00499 | 213 | PANTHER | S-TRANSFERASE TAU 22, PUTATIVE-RELATED | 4 | 105 | - | - | |
Cmo16g00499 | 213 | Pfam | Glutathione S-transferase, C-terminal domain | 105 | 171 | IPR004046 | - | |
Cmo16g00499 | 213 | SUPERFAMILY | Thioredoxin-like | 5 | 104 | IPR036249 | - | |
Cmo16g00499 | 213 | CDD | GST_N_Tau | 5 | 78 | - | - | |
Cmo16g00499 | 213 | PANTHER | GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING | 104 | 189 | IPR045073 | - | |
Cmo16g00499 | 213 | PANTHER | GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING | 4 | 105 | IPR045073 | - | |
Cmo16g00499 | 213 | Gene3D | - | 86 | 105 | - | - | |
Cmo16g00499 | 213 | CDD | GST_C_Tau | 89 | 188 | IPR045074 | GO:0004364|GO:0006749 | |
Cmo16g00499 | 213 | Gene3D | Glutaredoxin | 1 | 85 | - | - | |
Cmo16g00499 | 213 | Gene3D | - | 106 | 192 | - | - | |
Cmo16g00499 | 213 | Pfam | Glutathione S-transferase, N-terminal domain | 5 | 76 | IPR004045 | - | |
Cmo16g00499 | 213 | ProSiteProfiles | Soluble glutathione S-transferase C-terminal domain profile. | 63 | 187 | IPR010987 | - | |
Cmo16g00499 | 213 | SUPERFAMILY | GST C-terminal domain-like | 76 | 189 | IPR036282 | - | |
Cmo16g00499 | 213 | ProSiteProfiles | Soluble glutathione S-transferase N-terminal domain profile. | 3 | 82 | IPR004045 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo04g00687 | Cmo-Chr4:3407212 | Cmo16g00499 | Cmo-Chr16:2411394 | 4.81E-71 | dispersed | |
Cmo04g00688 | Cmo-Chr4:3408834 | Cmo16g00499 | Cmo-Chr16:2411394 | 1.32E-92 | dispersed | |
Cmo16g00499 | Cmo-Chr16:2411394 | Cmo03g00394 | Cmo-Chr3:4801084 | 2.01E-47 | dispersed | |
Cmo16g00499 | Cmo-Chr16:2411394 | Cmo16g00501 | Cmo-Chr16:2417740 | 2.32E-53 | proximal | |
Cmo16g00499 | Cmo-Chr16:2411394 | Cmo16g00500 | Cmo-Chr16:2417204 | 1.31E-59 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo16g00499 | K00799 | - | csv:101218562 | 317.775 |