Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo16g00503 ATGGAGGACGATTACTCCTTCTTCCCTCCCGATTCAGATCTCGATTTTAGCTTCACTTCCACCACCACCGACCGCACCTTCGCCTCCTCCAGCGCCCGCACCAGCCTTGCCAGGAGCAGCCTAACTCTCAGCTTTAATGAATCTCGCCTCGCCGCCGCTGCCGCCGCCGCTGCCGCTGTTAACCACCGTCCCCACCACCACTCTGACCCTCACTGGTCCGCTATCAAAGCCGCCACTGCACTCTCATCCGACGGCCGTCTCCATCTCCGCAACCTGAAACTCGTCCGCCACCTCGGCACCGGCAACCTCGGCCGCGTCTTCCTCTGCCATTTGAGAGACAACGATCATGCCAGTTTCGCCCTCAAGGTCGTTGATAAGGACGCACTCAGTAACAAGAAGCTGTTGCAGGTCCAAACGGAATCCGAGATTCTCGCTTCTCTGAATCATCCTTTTCTTCCCACTCTCTACGCGCGTCTCGATGTCTCTCACTACACGTGCCTCCTTATTGACTACTGCCCCGCCGGCGATCTTCACTCTCTCCTCCGCAAACAGCCTAGTTATCGCTTCTCCGTCGCGGCGGCTAGATTCTTCGCTGCCGAGGTTCTGGTGGCGCTCGAGTACCTTCACGCGCTTGGGATCGTGTACCGCGATCTCAAGCCTGAGAACGTTCTTTTGCGTGAGGATGGCCACGTCATGCTCTCTGATTTCGACTTGTGTTTTAAGTCCGAAGTGGTCCCCACTTTTCATACGTGGACTCAGCCGGGACCACAGAGTACTAGCTGCTTTGGGTGGAGGACGGCGGCAGCCGAACCGCAGGAGATTGTCGGGGAGTTTGTGGCGGAGCCGACGACAGCGTTTTCTAAATCATGCGTGGGGACTCATGAGTACTTAGCGCCAGAGTTGGTGACCGGCGGTGGTCACGGCAACGGCGTTGACTGGTGGGCGTTTGGGGTGTTTGTTTACGAGCTGCTACACGGGACGACGCCGTTTAAGGGAGTGAACAAAGAGGGTACATTAAGGAACATAGCATCGTCGGAGGCGGTGAAGTTCCGGGCGGCGGTGGAGGAAGAGGGGATGGCGGAGGCGAGAGATCTGATAGAGAGGCTGCTGGTGAAGGATCCAGCAAGGCGGTTGGGTTCCGGAAAAGGGGCGACGGAGATCAAACGGCATACGTTCTTCGACGGGATAAAGTGGCCGTTGATCAGGACGTATCGGGCGCCGGAGGTGTATGGGCTGATGAGAAAAGCCAGATCCCACGTGAGTCACGTGACTGGAGTCAGCCACCGCATGCGGCGGCGGACATGGTGGAACTGGAGGAAGCTCAGTAATGGTTTATTTAAAAATGGAAATGCCAGTAAATCTCATACCAATAACAATTATTATAGTTATAGCTCAAAATATTAG 1404 55.98 MEDDYSFFPPDSDLDFSFTSTTTDRTFASSSARTSLARSSLTLSFNESRLAAAAAAAAAVNHRPHHHSDPHWSAIKAATALSSDGRLHLRNLKLVRHLGTGNLGRVFLCHLRDNDHASFALKVVDKDALSNKKLLQVQTESEILASLNHPFLPTLYARLDVSHYTCLLIDYCPAGDLHSLLRKQPSYRFSVAAARFFAAEVLVALEYLHALGIVYRDLKPENVLLREDGHVMLSDFDLCFKSEVVPTFHTWTQPGPQSTSCFGWRTAAAEPQEIVGEFVAEPTTAFSKSCVGTHEYLAPELVTGGGHGNGVDWWAFGVFVYELLHGTTPFKGVNKEGTLRNIASSEAVKFRAAVEEEGMAEARDLIERLLVKDPARRLGSGKGATEIKRHTFFDGIKWPLIRTYRAPEVYGLMRKARSHVSHVTGVSHRMRRRTWWNWRKLSNGLFKNGNASKSHTNNNYYSYSSKY 467
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 2420978 2422381 - CmoCh16G005030.1 Cmo16g00503 399538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo16g00503 467 Pfam Protein kinase domain 94 393 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo16g00503 467 ProSitePatterns Serine/Threonine protein kinases active-site signature. 213 225 IPR008271 GO:0004672|GO:0006468
Cmo16g00503 467 Gene3D Transferase(Phosphotransferase) domain 1 176 242 - -
Cmo16g00503 467 Gene3D Transferase(Phosphotransferase) domain 1 287 406 - -
Cmo16g00503 467 ProSiteProfiles Protein kinase domain profile. 92 393 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo16g00503 467 Gene3D Phosphorylase Kinase; domain 1 92 175 - -
Cmo16g00503 467 PANTHER FLIPPASE KINASE 1-RELATED 10 423 - -
Cmo16g00503 467 SMART serkin_6 92 393 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo16g00503 467 SUPERFAMILY Protein kinase-like (PK-like) 68 424 IPR011009 -
Cmo16g00503 467 PANTHER SERINE/THREONINE-PROTEIN KINASE WAG1 10 423 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo04g00685 Cmo16g00503 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo16g00503 Cmo-Chr16:2420978 Cmo05g01322 Cmo-Chr5:10244098 4.08E-113 dispersed
Cmo16g00503 Cmo-Chr16:2420978 Cmo04g00685 Cmo-Chr4:3397380 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
74962 PF00069 Pkinase 4.50E-54 CL0016 Cmo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo16g00503 - - bhj:120087146 761.911