Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo16g00503 | ATGGAGGACGATTACTCCTTCTTCCCTCCCGATTCAGATCTCGATTTTAGCTTCACTTCCACCACCACCGACCGCACCTTCGCCTCCTCCAGCGCCCGCACCAGCCTTGCCAGGAGCAGCCTAACTCTCAGCTTTAATGAATCTCGCCTCGCCGCCGCTGCCGCCGCCGCTGCCGCTGTTAACCACCGTCCCCACCACCACTCTGACCCTCACTGGTCCGCTATCAAAGCCGCCACTGCACTCTCATCCGACGGCCGTCTCCATCTCCGCAACCTGAAACTCGTCCGCCACCTCGGCACCGGCAACCTCGGCCGCGTCTTCCTCTGCCATTTGAGAGACAACGATCATGCCAGTTTCGCCCTCAAGGTCGTTGATAAGGACGCACTCAGTAACAAGAAGCTGTTGCAGGTCCAAACGGAATCCGAGATTCTCGCTTCTCTGAATCATCCTTTTCTTCCCACTCTCTACGCGCGTCTCGATGTCTCTCACTACACGTGCCTCCTTATTGACTACTGCCCCGCCGGCGATCTTCACTCTCTCCTCCGCAAACAGCCTAGTTATCGCTTCTCCGTCGCGGCGGCTAGATTCTTCGCTGCCGAGGTTCTGGTGGCGCTCGAGTACCTTCACGCGCTTGGGATCGTGTACCGCGATCTCAAGCCTGAGAACGTTCTTTTGCGTGAGGATGGCCACGTCATGCTCTCTGATTTCGACTTGTGTTTTAAGTCCGAAGTGGTCCCCACTTTTCATACGTGGACTCAGCCGGGACCACAGAGTACTAGCTGCTTTGGGTGGAGGACGGCGGCAGCCGAACCGCAGGAGATTGTCGGGGAGTTTGTGGCGGAGCCGACGACAGCGTTTTCTAAATCATGCGTGGGGACTCATGAGTACTTAGCGCCAGAGTTGGTGACCGGCGGTGGTCACGGCAACGGCGTTGACTGGTGGGCGTTTGGGGTGTTTGTTTACGAGCTGCTACACGGGACGACGCCGTTTAAGGGAGTGAACAAAGAGGGTACATTAAGGAACATAGCATCGTCGGAGGCGGTGAAGTTCCGGGCGGCGGTGGAGGAAGAGGGGATGGCGGAGGCGAGAGATCTGATAGAGAGGCTGCTGGTGAAGGATCCAGCAAGGCGGTTGGGTTCCGGAAAAGGGGCGACGGAGATCAAACGGCATACGTTCTTCGACGGGATAAAGTGGCCGTTGATCAGGACGTATCGGGCGCCGGAGGTGTATGGGCTGATGAGAAAAGCCAGATCCCACGTGAGTCACGTGACTGGAGTCAGCCACCGCATGCGGCGGCGGACATGGTGGAACTGGAGGAAGCTCAGTAATGGTTTATTTAAAAATGGAAATGCCAGTAAATCTCATACCAATAACAATTATTATAGTTATAGCTCAAAATATTAG | 1404 | 55.98 | MEDDYSFFPPDSDLDFSFTSTTTDRTFASSSARTSLARSSLTLSFNESRLAAAAAAAAAVNHRPHHHSDPHWSAIKAATALSSDGRLHLRNLKLVRHLGTGNLGRVFLCHLRDNDHASFALKVVDKDALSNKKLLQVQTESEILASLNHPFLPTLYARLDVSHYTCLLIDYCPAGDLHSLLRKQPSYRFSVAAARFFAAEVLVALEYLHALGIVYRDLKPENVLLREDGHVMLSDFDLCFKSEVVPTFHTWTQPGPQSTSCFGWRTAAAEPQEIVGEFVAEPTTAFSKSCVGTHEYLAPELVTGGGHGNGVDWWAFGVFVYELLHGTTPFKGVNKEGTLRNIASSEAVKFRAAVEEEGMAEARDLIERLLVKDPARRLGSGKGATEIKRHTFFDGIKWPLIRTYRAPEVYGLMRKARSHVSHVTGVSHRMRRRTWWNWRKLSNGLFKNGNASKSHTNNNYYSYSSKY | 467 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
16 | 2420978 | 2422381 | - | CmoCh16G005030.1 | Cmo16g00503 | 399538 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo16g00503 | 467 | Pfam | Protein kinase domain | 94 | 393 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cmo16g00503 | 467 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 213 | 225 | IPR008271 | GO:0004672|GO:0006468 | |
Cmo16g00503 | 467 | Gene3D | Transferase(Phosphotransferase) domain 1 | 176 | 242 | - | - | |
Cmo16g00503 | 467 | Gene3D | Transferase(Phosphotransferase) domain 1 | 287 | 406 | - | - | |
Cmo16g00503 | 467 | ProSiteProfiles | Protein kinase domain profile. | 92 | 393 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cmo16g00503 | 467 | Gene3D | Phosphorylase Kinase; domain 1 | 92 | 175 | - | - | |
Cmo16g00503 | 467 | PANTHER | FLIPPASE KINASE 1-RELATED | 10 | 423 | - | - | |
Cmo16g00503 | 467 | SMART | serkin_6 | 92 | 393 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cmo16g00503 | 467 | SUPERFAMILY | Protein kinase-like (PK-like) | 68 | 424 | IPR011009 | - | |
Cmo16g00503 | 467 | PANTHER | SERINE/THREONINE-PROTEIN KINASE WAG1 | 10 | 423 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cmo04g00685 | Cmo16g00503 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo16g00503 | Cmo-Chr16:2420978 | Cmo05g01322 | Cmo-Chr5:10244098 | 4.08E-113 | dispersed | |
Cmo16g00503 | Cmo-Chr16:2420978 | Cmo04g00685 | Cmo-Chr4:3397380 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
74962 | PF00069 | Pkinase | 4.50E-54 | CL0016 | Cmo | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo16g00503 | - | - | bhj:120087146 | 761.911 |