Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo16g00508 ATGGAGATTGTGTTTAAGAGGGTAAAGTCCCCAACAAAAAGTTTTGGTGATGAAGAACAAGAACTGTCGGGCATCCAAAATGTTAGATTTTACACTTACAAAGAGCTGAAAGTTGCGACCGACGATTTCAGCTTGACGAATAAAATAGGGGAGGGTGATGGAAAGATTGCTGCCATAAAAGTTCTTTCAGCTGAATCAAAACAAGGATTGAAGGAATTCTTGACAGAAATCAATGTCATCTCTGTGATAGAACATGAAAATCTGGTTCAGCTTTATGGCTGCTGTGTGGATGATAATCATAGAATCCTTGTCTACAACTACCTCGAGAATAATAGCCTTGCACAAACTCTTCTCGGGCGAGGTCACAGTAGCATCCAGTTTAATTGGCGAACGAGGTCCAAGATTTGCATTGGAATTGCACGTGGGCTCGCGTTCCTTCACGAGGACGTACAGCCACATATCATTCATAGAGATATCAAAGCCAGCAACATTCTTCTCGACCGCGACCTCACTCCTAAAATTTCAGATTTCGGCCTCGCAAAGCTTATTCCAGCCAGCATGACTCATGTCAGTACACGAGTGGCAGGAACAATTGGTTACCTAGCTCCAGAATATGCCATCAGAGGACAGGTGACAAGAAAATCGGATCTTTACAGTTTCGGCGTCCTCCTCGTGGAAATCGTCAGCGGGAGATGCAACACGAATACACAACTACCAATGGGAGAACAATATCTTCTTGAAAGGACATGGCATCATTACGAGCAAGGAGAGCTCGTTCTACTTGTAGATGTGTCCTTAAATGGCGACTTCGATGCCGAGGAGGCTTGTAGATATCTAAAGATTGGTCTACTTTGCACTCAAGACAGTCCAAAGCTCCGTCCATCGATGTCGACCGTGGTAAAGATGCTAACGGGCGAGATGAGTATCAAAGATAGAAAGATAACGAAACCGGGGCTGATTTTGGACTTCATGGATCTAAAAGTAAGGGATCAACAGCAAAAGAAGGGGAATAAAGAAAGATTGTCTTCTGATAGTCTGTCTTCTGGATCGTCAACTGTTACAACTGCAACCTTCAGTGCACAATATGACAGGAACACCTTCTCATCTGTCATGTGA 1116 43.73 MEIVFKRVKSPTKSFGDEEQELSGIQNVRFYTYKELKVATDDFSLTNKIGEGDGKIAAIKVLSAESKQGLKEFLTEINVISVIEHENLVQLYGCCVDDNHRILVYNYLENNSLAQTLLGRGHSSIQFNWRTRSKICIGIARGLAFLHEDVQPHIIHRDIKASNILLDRDLTPKISDFGLAKLIPASMTHVSTRVAGTIGYLAPEYAIRGQVTRKSDLYSFGVLLVEIVSGRCNTNTQLPMGEQYLLERTWHHYEQGELVLLVDVSLNGDFDAEEACRYLKIGLLCTQDSPKLRPSMSTVVKMLTGEMSIKDRKITKPGLILDFMDLKVRDQQQKKGNKERLSSDSLSSGSSTVTTATFSAQYDRNTFSSVM 371
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 2450461 2454667 - CmoCh16G005080.1 Cmo16g00508 399543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo16g00508 371 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 4 357 - -
Cmo16g00508 371 Gene3D Phosphorylase Kinase; domain 1 16 107 - -
Cmo16g00508 371 ProSitePatterns Serine/Threonine protein kinases active-site signature. 154 166 IPR008271 GO:0004672|GO:0006468
Cmo16g00508 371 ProSiteProfiles Protein kinase domain profile. 1 309 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo16g00508 371 SUPERFAMILY Protein kinase-like (PK-like) 21 303 IPR011009 -
Cmo16g00508 371 Gene3D Transferase(Phosphotransferase) domain 1 108 317 - -
Cmo16g00508 371 PANTHER SERINE/THREONINE-PROTEIN KINASE-RELATED 4 357 - -
Cmo16g00508 371 Pfam Protein tyrosine and serine/threonine kinase 55 302 IPR001245 GO:0004672|GO:0006468
Cmo16g00508 371 MobiDBLite consensus disorder prediction 332 351 - -
Cmo16g00508 371 SMART serkin_6 43 303 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo04g00611 Cmo16g00508 CST
Cmo04g00679 Cmo16g00508 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo04g00611 Cmo-Chr4:3037463 Cmo16g00508 Cmo-Chr16:2450461 9.83E-156 dispersed
Cmo07g00976 Cmo-Chr7:4795016 Cmo16g00508 Cmo-Chr16:2450461 3.09E-120 dispersed
Cmo16g00508 Cmo-Chr16:2450461 Cmo04g00711 Cmo-Chr4:3519505 1.78E-102 dispersed
Cmo16g00508 Cmo-Chr16:2450461 Cmo04g00679 Cmo-Chr4:3370962 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
74963 PF07714 PK_Tyr_Ser-Thr 2.30E-40 CL0016 Cmo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo16g00508 - - csv:101216433 608.986