Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo16g00514 | ATGTCGCTTCTCTGCAGTCTAACGTCCAATGATAGTCGAAACTTTGACGCTCGGTTATTACTCGAGATGTCTAGACACGGTTCAGAGAATGGAACTCAGCTGCTTCTGGAGATGAAACAAGCATCTTCCAAATCCATCCATTATAGTTTGCTTTCAGCTACAGATAGCCATGGAGGTAGCGATGACGAAGATGATGAAGACGACAACGAAGAAGACGAAGTTGTTCCAGTCATGGCGGTCGTGATATTGCAGCAATTTTGGTTGCCATCTTTGAACTTCAATCGGCTCTGGAGAACTGTTTCTCAACATGTAGGCTCCACAAATGATTCACACAGAAACGACGATGAATTCATCAATGGCCTTCTTCCTCCAGGCTTCGACCAAAAATCCTGTTTAAGCCGATACCAACTGAATCTCTACAGAAAACCTTCTCCCTACATACCCTCTTCTCCTCTCCTCTCTAAGCTCCGCCGCTATGAATCCCTCCACCGCCGCTGCGGCCCCAATTCGCCATCCTTCCGCCGAGCTCTTGTCGGTCTAACTTCACCCACAAACTCCACATCCCTGCCGGAAGACTGCAAATACGCTGTGGTTTTAACCCGCGATGGCCTAGGCAACCGTATCCTCGCTATTATCTCCGCCTTCTTCTACGCTCTAATGTCCGATCGCGTCTTTCTAATCGACAGAGGCAACGCTCTTGATGATCTCTTCTGTGAACCCTTTCTCGGATCCTCGTGGATTCTGCCGTCGGATTTCCCTCTCCGCCGGGAATTTGGCTCGTTCCGCCAGTCCTTTCCAGGGTCTTTTGGCAACATTTTGAGAAATGGAATGTTGGAGAAAACAATCGAAGATTCGCCTGTGAGTTATTTGTATCTCCATCTATCTCACGACGCCAGCGATTACGACAAACTGTTTTACTGCGACCGGCAGCAGAATCTTCTGAAGAAGGTCCCATGGCTGATTATGGAGACGAACAACTACCTGGTTCCCGGAATTTTTCTTGGTTCGTTTTTCAGAGAAGAGCTCAATAAACTCTTTCCGGCGAAGGACACTGTTTTCCACCATCTCGGCCGGTACCTCTTCCACCCGACGAACGGCGTCTGGGGGCTGATTTCGAGATCTTACAAGCCGTATCTCGCCAGAGCGAAAGAAATGTTAGGGATTCAGATCCGGAATTTCGGGTCGGAATCCGGTTCGTTTCAGGACCAGATGAATCAACTTCTAGCTTGCACACAGAAGAAGAAATTACTGCCGGATGTCGAGCAATCGTCGCCGGAGAAGTCGAATTCCACAGCGTCTCAGACGGTGAAAGTTGTGCTGGTGACGTCTCTGAGCTCTGAATACTCGGAAACCCTAAAGGAAATGTACTGGGAGCATGGGGGCATCGACGGCGAGGTGGTGGCGGTGTACCAACCGAGCCACGAGGGGATTCAAAGCTCTAACAAAAAAATGCACAACCGGAAGGCACTGGCAGAGATGTACCTTCTGAGCTTGAGCGACGTGTTGGTGACGAGCGATTGGTCGACGTTTGGGTATGTAGCGCAGGGACTTGCCGGAGTGAAGCCATGGATGCTTTACAAGGCAGAGGATAAGGTGTTTCCGCCATTGAATGAATGGCTGAAGTACAGAACCAGGAATGAGACAGGCGACTGGCCATGCCGGCGGGCGGTGTCGATGGAGCCGTGCCTGCACGTGCCGCCCGTGTGCGATTGCGATGAGATGCAGAGAAGAGATGGATGGAATGAATTGCCGTTTGTGACGCATTGTGAAGATGCGAGTTGGGGCCTTAAGTTAGTTAATGAATTCAACTGA | 1812 | 50.11 | MSLLCSLTSNDSRNFDARLLLEMSRHGSENGTQLLLEMKQASSKSIHYSLLSATDSHGGSDDEDDEDDNEEDEVVPVMAVVILQQFWLPSLNFNRLWRTVSQHVGSTNDSHRNDDEFINGLLPPGFDQKSCLSRYQLNLYRKPSPYIPSSPLLSKLRRYESLHRRCGPNSPSFRRALVGLTSPTNSTSLPEDCKYAVVLTRDGLGNRILAIISAFFYALMSDRVFLIDRGNALDDLFCEPFLGSSWILPSDFPLRREFGSFRQSFPGSFGNILRNGMLEKTIEDSPVSYLYLHLSHDASDYDKLFYCDRQQNLLKKVPWLIMETNNYLVPGIFLGSFFREELNKLFPAKDTVFHHLGRYLFHPTNGVWGLISRSYKPYLARAKEMLGIQIRNFGSESGSFQDQMNQLLACTQKKKLLPDVEQSSPEKSNSTASQTVKVVLVTSLSSEYSETLKEMYWEHGGIDGEVVAVYQPSHEGIQSSNKKMHNRKALAEMYLLSLSDVLVTSDWSTFGYVAQGLAGVKPWMLYKAEDKVFPPLNEWLKYRTRNETGDWPCRRAVSMEPCLHVPPVCDCDEMQRRDGWNELPFVTHCEDASWGLKLVNEFN | 603 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
16 | 2484209 | 2486952 | - | CmoCh16G005140.1 | Cmo16g00514 | 399549 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo16g00514 | 603 | Gene3D | - | 191 | 239 | - | - | |
Cmo16g00514 | 603 | PANTHER | GALACTOSIDE 2-ALPHA-L-FUCOSYLTRANSFERASE | 536 | 601 | - | - | |
Cmo16g00514 | 603 | Pfam | Xyloglucan fucosyltransferase | 103 | 571 | IPR004938 | GO:0008107|GO:0016020|GO:0042546 | |
Cmo16g00514 | 603 | PANTHER | FUCOSYLTRANSFERASE 2-RELATED | 102 | 534 | IPR004938 | GO:0008107|GO:0016020|GO:0042546 | |
Cmo16g00514 | 603 | PANTHER | FUCOSYLTRANSFERASE 2-RELATED | 536 | 601 | IPR004938 | GO:0008107|GO:0016020|GO:0042546 | |
Cmo16g00514 | 603 | Gene3D | - | 372 | 530 | - | - | |
Cmo16g00514 | 603 | MobiDBLite | consensus disorder prediction | 52 | 72 | - | - | |
Cmo16g00514 | 603 | PANTHER | GALACTOSIDE 2-ALPHA-L-FUCOSYLTRANSFERASE | 102 | 534 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo01g00838 | Cmo-Chr1:4470695 | Cmo16g00514 | Cmo-Chr16:2484209 | 1.83E-167 | dispersed | |
Cmo13g01199 | Cmo-Chr13:9446633 | Cmo16g00514 | Cmo-Chr16:2484209 | 1.35E-167 | dispersed | |
Cmo16g00514 | Cmo-Chr16:2484209 | Cmo04g01754 | Cmo-Chr4:8850998 | 1.42E-169 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo16g00514 | K13681 | - | csv:101222105 | 844.343 |