Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo16g00514 ATGTCGCTTCTCTGCAGTCTAACGTCCAATGATAGTCGAAACTTTGACGCTCGGTTATTACTCGAGATGTCTAGACACGGTTCAGAGAATGGAACTCAGCTGCTTCTGGAGATGAAACAAGCATCTTCCAAATCCATCCATTATAGTTTGCTTTCAGCTACAGATAGCCATGGAGGTAGCGATGACGAAGATGATGAAGACGACAACGAAGAAGACGAAGTTGTTCCAGTCATGGCGGTCGTGATATTGCAGCAATTTTGGTTGCCATCTTTGAACTTCAATCGGCTCTGGAGAACTGTTTCTCAACATGTAGGCTCCACAAATGATTCACACAGAAACGACGATGAATTCATCAATGGCCTTCTTCCTCCAGGCTTCGACCAAAAATCCTGTTTAAGCCGATACCAACTGAATCTCTACAGAAAACCTTCTCCCTACATACCCTCTTCTCCTCTCCTCTCTAAGCTCCGCCGCTATGAATCCCTCCACCGCCGCTGCGGCCCCAATTCGCCATCCTTCCGCCGAGCTCTTGTCGGTCTAACTTCACCCACAAACTCCACATCCCTGCCGGAAGACTGCAAATACGCTGTGGTTTTAACCCGCGATGGCCTAGGCAACCGTATCCTCGCTATTATCTCCGCCTTCTTCTACGCTCTAATGTCCGATCGCGTCTTTCTAATCGACAGAGGCAACGCTCTTGATGATCTCTTCTGTGAACCCTTTCTCGGATCCTCGTGGATTCTGCCGTCGGATTTCCCTCTCCGCCGGGAATTTGGCTCGTTCCGCCAGTCCTTTCCAGGGTCTTTTGGCAACATTTTGAGAAATGGAATGTTGGAGAAAACAATCGAAGATTCGCCTGTGAGTTATTTGTATCTCCATCTATCTCACGACGCCAGCGATTACGACAAACTGTTTTACTGCGACCGGCAGCAGAATCTTCTGAAGAAGGTCCCATGGCTGATTATGGAGACGAACAACTACCTGGTTCCCGGAATTTTTCTTGGTTCGTTTTTCAGAGAAGAGCTCAATAAACTCTTTCCGGCGAAGGACACTGTTTTCCACCATCTCGGCCGGTACCTCTTCCACCCGACGAACGGCGTCTGGGGGCTGATTTCGAGATCTTACAAGCCGTATCTCGCCAGAGCGAAAGAAATGTTAGGGATTCAGATCCGGAATTTCGGGTCGGAATCCGGTTCGTTTCAGGACCAGATGAATCAACTTCTAGCTTGCACACAGAAGAAGAAATTACTGCCGGATGTCGAGCAATCGTCGCCGGAGAAGTCGAATTCCACAGCGTCTCAGACGGTGAAAGTTGTGCTGGTGACGTCTCTGAGCTCTGAATACTCGGAAACCCTAAAGGAAATGTACTGGGAGCATGGGGGCATCGACGGCGAGGTGGTGGCGGTGTACCAACCGAGCCACGAGGGGATTCAAAGCTCTAACAAAAAAATGCACAACCGGAAGGCACTGGCAGAGATGTACCTTCTGAGCTTGAGCGACGTGTTGGTGACGAGCGATTGGTCGACGTTTGGGTATGTAGCGCAGGGACTTGCCGGAGTGAAGCCATGGATGCTTTACAAGGCAGAGGATAAGGTGTTTCCGCCATTGAATGAATGGCTGAAGTACAGAACCAGGAATGAGACAGGCGACTGGCCATGCCGGCGGGCGGTGTCGATGGAGCCGTGCCTGCACGTGCCGCCCGTGTGCGATTGCGATGAGATGCAGAGAAGAGATGGATGGAATGAATTGCCGTTTGTGACGCATTGTGAAGATGCGAGTTGGGGCCTTAAGTTAGTTAATGAATTCAACTGA 1812 50.11 MSLLCSLTSNDSRNFDARLLLEMSRHGSENGTQLLLEMKQASSKSIHYSLLSATDSHGGSDDEDDEDDNEEDEVVPVMAVVILQQFWLPSLNFNRLWRTVSQHVGSTNDSHRNDDEFINGLLPPGFDQKSCLSRYQLNLYRKPSPYIPSSPLLSKLRRYESLHRRCGPNSPSFRRALVGLTSPTNSTSLPEDCKYAVVLTRDGLGNRILAIISAFFYALMSDRVFLIDRGNALDDLFCEPFLGSSWILPSDFPLRREFGSFRQSFPGSFGNILRNGMLEKTIEDSPVSYLYLHLSHDASDYDKLFYCDRQQNLLKKVPWLIMETNNYLVPGIFLGSFFREELNKLFPAKDTVFHHLGRYLFHPTNGVWGLISRSYKPYLARAKEMLGIQIRNFGSESGSFQDQMNQLLACTQKKKLLPDVEQSSPEKSNSTASQTVKVVLVTSLSSEYSETLKEMYWEHGGIDGEVVAVYQPSHEGIQSSNKKMHNRKALAEMYLLSLSDVLVTSDWSTFGYVAQGLAGVKPWMLYKAEDKVFPPLNEWLKYRTRNETGDWPCRRAVSMEPCLHVPPVCDCDEMQRRDGWNELPFVTHCEDASWGLKLVNEFN 603
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 2484209 2486952 - CmoCh16G005140.1 Cmo16g00514 399549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo16g00514 603 Gene3D - 191 239 - -
Cmo16g00514 603 PANTHER GALACTOSIDE 2-ALPHA-L-FUCOSYLTRANSFERASE 536 601 - -
Cmo16g00514 603 Pfam Xyloglucan fucosyltransferase 103 571 IPR004938 GO:0008107|GO:0016020|GO:0042546
Cmo16g00514 603 PANTHER FUCOSYLTRANSFERASE 2-RELATED 102 534 IPR004938 GO:0008107|GO:0016020|GO:0042546
Cmo16g00514 603 PANTHER FUCOSYLTRANSFERASE 2-RELATED 536 601 IPR004938 GO:0008107|GO:0016020|GO:0042546
Cmo16g00514 603 Gene3D - 372 530 - -
Cmo16g00514 603 MobiDBLite consensus disorder prediction 52 72 - -
Cmo16g00514 603 PANTHER GALACTOSIDE 2-ALPHA-L-FUCOSYLTRANSFERASE 102 534 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo01g00838 Cmo-Chr1:4470695 Cmo16g00514 Cmo-Chr16:2484209 1.83E-167 dispersed
Cmo13g01199 Cmo-Chr13:9446633 Cmo16g00514 Cmo-Chr16:2484209 1.35E-167 dispersed
Cmo16g00514 Cmo-Chr16:2484209 Cmo04g01754 Cmo-Chr4:8850998 1.42E-169 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo16g00514 K13681 - csv:101222105 844.343