Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo16g00549 ATGGTGTTTGGGAGATTTAGGGATATCATCTCGTCTGCAACCACTCGTTTGTCGGGTCGCCAGTCTTCTGTAGATGCGTATAAGTCGTCTTCGTCGCCTGGATCTTCGCCTCCCTTGATCGCTTCTTCTTCTCCTATTCTTGCCGGATTTGCTAGTCCTGCGCTTAAGAACAATCTAAGGCTTTCATCGTCGCTCCAGGATCTCTCTACTTACCGTCGACTTGATCTCGAAGAGGGTAATCATGGACTTGAGAATGCTGCTCCTGATTTCAGATCACTCCAGCGAGAGAATGCCGCCTCTAGTTTCTCAAAAGAGAAGACATTGCCTGGAGGCTTCTTCTGGTGGTTGAGCAAGAAGTGGGTTCGGACAATTGTTCTTTTTCTGTGTCTATTGCTCTTTTTTGTTCTAATCTATACGGTTTCTATGTATATTTATTCATATTGGTCTCAAGGAACGCCTAGATACTATGTGGTGCTTGACTCTGGAAGTACTGGCACTCGAGCTTATGTATATCAAGCAAGTGTTAATTATAAGAAAAATGGAGCGCTTCCCATTGCCATTAGATCATATACAGGACAAAAGAAAAAATTGAAGTCTCAGAGCGGACGGGCTTATGATCGAATGGAAACAGAACCTGGTCTTGATAAGTTGGTTCGTAATGTAACGGGTTTGAGGAAAGCTATTAAACCTCTGCTTCAGTGGGCTGAGAAGCAGATACCGAAGCGTGCCCATGAAAGCACCTCTCTTTTCCTTTATGCGACTGCTGGAGTTAGAAGACTACCCCCCGCAGAGTCGAAATGGCTTCTGGACAATGCCTGGTCTATATTAAAGAGTTCGCGTTTTCTTTGCCAGAGAGAGTGGGTTAAGACCATTTCAGGTACAGAAGAGGCTTACTATGGGTGGATAGCCCTTAACTATCAGAAACAAGTGTTGGGGGCTACACCAAGGGAACCAACGTACGGGGCACTCGACTTGGGTGGTTCTTCTTTGCAAGTTACTTTTGAAAGCAAGGAGCAAAACGAGTCTAGTTTGAACATTAAAATTGGAAATGTGGATTATCATCTTAATGCCTATTCTCTTACTGGCTATGGTTTAAATGATGCATTTGGGAAATCTGTCGTCCACCTACTAAGAAGGATCGAAGAACGTGAGAAACTGGACTTGTCTAATGGAAAATTTAAACTTAACCACCCTTGCCTGCATTCTGGGTACAACAAGCAGTATACCTGTAACCAGTGTGGAAAATTATTGGGAAGAGAAGGAAATTCTGGGATTTCTCTAAGACTGATCGGTGCACCGAATTGGGAAGAATGTTCTGCACTTGCTAAAGTTGCAGTGAATTTTTCCGAGTGGTCAAATACAAGTGCTGGAGTTGATTGTGATGTGCAACCTTGTGCTATAACTAATGACTACCCTTCCCCATATGGAAATTTTTATGCCATTTCCGGTTTCTTTGTGGTATTTCGATTTTTCAATCTGACTTCAGAGGTTACACTTGATGATGTATTAGAAAGGGGTCAAAAATTTTGTGAGAAACCTTGGGAAGTTGCTCTGGCTAGTGTTGCTCCACAGCCCTTTATTGAGCAATACTGCTTTAGAGCGCCGTACATAGTCTCACTCCTTAGAGAAGGGTTGCATATTACCGATAAACAAATTGTTATCGGTTCTGGGAGTACGACTTGGACACTTGGGGTCTCGCTGCTGGAGGCTGGGAAGGCATTTACAATTACAACAACCAGGCTAGAGCTCCGTGGTTATGAAATTTTTAAACTGAAGATAGATCCTCTAGTCCTTATAGTCATTGTGTTCACATCATTGTTTTTCCTGCTTGCATTATCCTGTGTAGGAAGTGCAATACCTAGATTTTTCCGCAGGCCATACCTCCCAATTTTCAGGCATAATGCTGTCTCCACCACGTCTGTTTTAAACATCCCTTCTCCTTTTCGGTTACAGCGGTGGAGTCCAATGAATGCTGGTGATGGCAGAGTCAAGATGCCACTAAGCCCAACAGCTAAAGGTTCTGAAGAAAGAACCTTTGGCTTAGGACATGGCTTTGGCAGCAGCAGTGGCATTCAACTTATGGAGTCGTCGTTGCACCGATCAACAAGTAGTGGGGTTTCGCATAGTTACTCTTCAAATAGCCTTGGCCAAATGCAGTTTGACAACAACAGCGTCGGTTCCTTCTGGACTCCACACCGGAGTCAGATGCGCCTTCAAAGTAGACGATCGCAATCTCGAGAGGATCTCTCTTCAACGTTGGCTGAAACACACACGGGGAAGGTTTAG 2286 44.14 MVFGRFRDIISSATTRLSGRQSSVDAYKSSSSPGSSPPLIASSSPILAGFASPALKNNLRLSSSLQDLSTYRRLDLEEGNHGLENAAPDFRSLQRENAASSFSKEKTLPGGFFWWLSKKWVRTIVLFLCLLLFFVLIYTVSMYIYSYWSQGTPRYYVVLDSGSTGTRAYVYQASVNYKKNGALPIAIRSYTGQKKKLKSQSGRAYDRMETEPGLDKLVRNVTGLRKAIKPLLQWAEKQIPKRAHESTSLFLYATAGVRRLPPAESKWLLDNAWSILKSSRFLCQREWVKTISGTEEAYYGWIALNYQKQVLGATPREPTYGALDLGGSSLQVTFESKEQNESSLNIKIGNVDYHLNAYSLTGYGLNDAFGKSVVHLLRRIEEREKLDLSNGKFKLNHPCLHSGYNKQYTCNQCGKLLGREGNSGISLRLIGAPNWEECSALAKVAVNFSEWSNTSAGVDCDVQPCAITNDYPSPYGNFYAISGFFVVFRFFNLTSEVTLDDVLERGQKFCEKPWEVALASVAPQPFIEQYCFRAPYIVSLLREGLHITDKQIVIGSGSTTWTLGVSLLEAGKAFTITTTRLELRGYEIFKLKIDPLVLIVIVFTSLFFLLALSCVGSAIPRFFRRPYLPIFRHNAVSTTSVLNIPSPFRLQRWSPMNAGDGRVKMPLSPTAKGSEERTFGLGHGFGSSSGIQLMESSLHRSTSSGVSHSYSSNSLGQMQFDNNSVGSFWTPHRSQMRLQSRRSQSREDLSSTLAETHTGKV 761
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 2647835 2652311 - CmoCh16G005490.1 Cmo16g00549 399584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo16g00549 761 Gene3D - 146 293 - -
Cmo16g00549 761 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 87 719 IPR000407 GO:0016787
Cmo16g00549 761 Pfam GDA1/CD39 (nucleoside phosphatase) family 153 568 IPR000407 GO:0016787
Cmo16g00549 761 PANTHER APYRASE 7-RELATED 87 719 - -
Cmo16g00549 761 Gene3D Exopolyphosphatase. Domain 2 294 555 - -
Cmo16g00549 761 MobiDBLite consensus disorder prediction 745 761 - -
Cmo16g00549 761 MobiDBLite consensus disorder prediction 733 761 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo13g00908 Cmo-Chr13:8057496 Cmo16g00549 Cmo-Chr16:2647835 2.00E-91 dispersed
Cmo16g00549 Cmo-Chr16:2647835 Cmo04g00649 Cmo-Chr4:3219653 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo16g00549 - - cmax:111483167 1433.7