Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo16g00553 | ATGTTCTGTTTCGCCGCCGTCATCGCCGCCTTCTTTCTTCTTCTTCTTCATTTTCTTTTCAAATTCTCCGCCCCTGCTCGCCGGAAACTTCCCCTTCCGCCGGGCTCAATGGGCTGGCCTTACATGGGTGAAACCCTCCAACTCTACTCGCAAGATCCCAATGTCTTCTTCGCCTCAAAGAAGAAGAGATATGGTCCTATTTTCAAGTCCCACATATTGGGTTATCCTTGTGTGATGGTTTCTAGCCCTGAAGCTGCTAAGTTTGTGTTGGTCACTAAAGCTCATCTCTTTAAGCCTACATTTCCAGCCAGTAAAGAAAGGATGTTGGGCAAAAATGCCATCTTCTTTCACCAAGGTGACTACCATGCTAAATTACGACGCCTCGTTCTTCGAACATTCATGCCTGAAGCGATTCGAAACATCGTCCCGAGTATCGAATCCATTGCTAAGAACACTGTTCAATCATGGGATGGACAATTGATCAATACCTTCCAAGAAATGAAGATGTTTGCATTCGAGGTTTCTTTACTTTCGATATTTGGAAAAGAAGAAGCTCTTTACTTCGAAGACTTGAAGCGATGCTATTACACACTTGAAAAAGGGTACAATTCAATGCCGATAAACCTGCCAGGAACACTCTTCCACAAGGCCATGAAAGCAAGAAAAGAGCTAGCACATATCTTAACCAAGATCCTCTCAACCAGAAGGGAAATGAAGCGCGATCACAACGATCTCCTTGGATCTTTCATGGGTGAAAAGGAAGGCCTCACCGATGAACAGATCGCCGATAACGTCATCGGTCTAATCTTCGCTGCTCGGGATACGACCGCGAGTGTTCTAACATGGATCTTGAAGTATCTAGGAGAAAACCCAAGTGTTCTTCAAGCTGTCACTGATGAACAAGAAGCAATCATGAAGGAAAAACAGAGTGGAGATGATAATCTCACCTGGGCTGACACCAAAAACATGCCGATCACTTCAAGGGTGATTCAAGAAACTCTAAGAGTTGCTTCAGTTCTATCATTTACCTTCAGAGAAGCAGTGGAAGATGTAGAATTTGACGGCTATTTGATTCCAAAAGGATGGAAAGTTCTTCCTCTTTTCAGAAACATTCATCACAGCCCAGAAAATTTCCCTCAACCTGACAAGTTCGATCCTTCAAGATTCGAGGTAAAAACAGAGGAAACAAAGCACAGTGTCCCTCAAAAACCCAATACCTACATGCCATTTGGCAATGGAACCCACTCTTGTCCAGGAAATGAACTGGCCAAGCTCGAAATGCTCGTTCTTCTCCATCATTTAACCACCAAGTACAGATGGAGTGTAGTGGGCGCTCAAGAAGGCATTCAATACGGTCCTTTTGCGCTTCCCCATAATGGGCTTCCCATTAAAATCTCTCTGAAGAAGTAA | 1410 | 44.11 | MFCFAAVIAAFFLLLLHFLFKFSAPARRKLPLPPGSMGWPYMGETLQLYSQDPNVFFASKKKRYGPIFKSHILGYPCVMVSSPEAAKFVLVTKAHLFKPTFPASKERMLGKNAIFFHQGDYHAKLRRLVLRTFMPEAIRNIVPSIESIAKNTVQSWDGQLINTFQEMKMFAFEVSLLSIFGKEEALYFEDLKRCYYTLEKGYNSMPINLPGTLFHKAMKARKELAHILTKILSTRREMKRDHNDLLGSFMGEKEGLTDEQIADNVIGLIFAARDTTASVLTWILKYLGENPSVLQAVTDEQEAIMKEKQSGDDNLTWADTKNMPITSRVIQETLRVASVLSFTFREAVEDVEFDGYLIPKGWKVLPLFRNIHHSPENFPQPDKFDPSRFEVKTEETKHSVPQKPNTYMPFGNGTHSCPGNELAKLEMLVLLHHLTTKYRWSVVGAQEGIQYGPFALPHNGLPIKISLKK | 469 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
16 | 2690840 | 2693447 | + | CmoCh16G005530.1 | Cmo16g00553 | 399588 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo16g00553 | 469 | Gene3D | Cytochrome P450 | 23 | 467 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cmo16g00553 | 469 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 410 | 419 | IPR017972 | GO:0005506|GO:0016705 | |
Cmo16g00553 | 469 | PRINTS | E-class P450 group I signature | 280 | 306 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cmo16g00553 | 469 | PRINTS | E-class P450 group I signature | 327 | 345 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cmo16g00553 | 469 | PRINTS | E-class P450 group I signature | 367 | 391 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cmo16g00553 | 469 | PRINTS | E-class P450 group I signature | 407 | 417 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cmo16g00553 | 469 | PRINTS | E-class P450 group I signature | 260 | 277 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cmo16g00553 | 469 | PRINTS | E-class P450 group I signature | 61 | 80 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cmo16g00553 | 469 | PRINTS | E-class P450 group I signature | 417 | 440 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cmo16g00553 | 469 | PANTHER | ABSCISIC ACID 8'-HYDROXYLASE CYP707A2 | 8 | 466 | - | - | |
Cmo16g00553 | 469 | Pfam | Cytochrome P450 | 33 | 444 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cmo16g00553 | 469 | PRINTS | P450 superfamily signature | 408 | 417 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cmo16g00553 | 469 | PRINTS | P450 superfamily signature | 328 | 339 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cmo16g00553 | 469 | PRINTS | P450 superfamily signature | 271 | 288 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cmo16g00553 | 469 | PRINTS | P450 superfamily signature | 417 | 428 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cmo16g00553 | 469 | PANTHER | CYTOCHROME P450 26 | 8 | 466 | - | - | |
Cmo16g00553 | 469 | SUPERFAMILY | Cytochrome P450 | 27 | 465 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo01g01899 | Cmo-Chr1:13671091 | Cmo16g00553 | Cmo-Chr16:2690840 | 0 | dispersed | |
Cmo05g00185 | Cmo-Chr5:818448 | Cmo16g00553 | Cmo-Chr16:2690840 | 0 | dispersed | |
Cmo16g00553 | Cmo-Chr16:2690840 | Cmo19g00623 | Cmo-Chr19:6822808 | 3.53E-146 | dispersed | |
Cmo01g00644 | Cmo-Chr1:3292627 | Cmo16g00553 | Cmo-Chr16:2690840 | 0 | transposed | |
Cmo16g00553 | Cmo-Chr16:2690840 | Cmo04g00643 | Cmo-Chr4:3182160 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo16g00553 | K09843 | - | csv:101212508 | 845.884 |