Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cmo16g00559 | ATGGATTGGGCATTCGTCCGCAAAGCTTGGGACAAATGGGCTTCCGGCAGCATTGGCACCTTCGGTAACCAACACCGACCGCCATTTTCAATTCGTCAGCCATTGAAAGCTGCTCTGTTGATCAATTATGATCCTACTGGACCTTCCCGTTTGCTTTCGACCATTGCAGAACAAGAAGGAATATTGCTTAATCCTATAGAACTGAATCAGTTTATCGATTTCATCAAACGTGACAAACCCCAAAATGAGAGTTTCAGCATCGGCTCAAATCAATACATAATGACATCAGTCCATGAGAATTGGTTTTGTGCAAGGTGCATGAACACTATAAAGCATGCTGGTGAAGGCGTTGTTATAGTGCAAACAACAGCCTTTATTTTGGTTGCTATGTATGATGGCTCGATTGCAGCAGCGTCTCGCGCTATGGCGTCTGCCGATCAGTTATCTGGGCAGTTAGGCAGGAAAAATCTTTAG | 474 | 44.51 | MDWAFVRKAWDKWASGSIGTFGNQHRPPFSIRQPLKAALLINYDPTGPSRLLSTIAEQEGILLNPIELNQFIDFIKRDKPQNESFSIGSNQYIMTSVHENWFCARCMNTIKHAGEGVVIVQTTAFILVAMYDGSIAAASRAMASADQLSGQLGRKNL | 157 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 16 | 2726719 | 2728946 | - | CmoCh16G005590.1 | Cmo16g00559 | 399594 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cmo16g00559 | 157 | Pfam | Profilin | 53 | 153 | IPR005455 | GO:0003779 | |
| Cmo16g00559 | 157 | Gene3D | Dynein light chain 2a, cytoplasmic | 31 | 155 | - | - | |
| Cmo16g00559 | 157 | PANTHER | OS05G0241400 PROTEIN | 1 | 157 | - | - | |
| Cmo16g00559 | 157 | SUPERFAMILY | Profilin (actin-binding protein) | 29 | 149 | IPR036140 | - | |
| Cmo16g00559 | 157 | PANTHER | OS05G0241400 PROTEIN | 1 | 157 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cmo16g00559 | Cmo-Chr16:2726719 | Cmo04g00636 | Cmo-Chr4:3147249 | 1.53E-08 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cmo16g00559 | - | - | csv:105435190 | 271.166 |