Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo16g00619 ATGGCGGGCGGGATCTTGCTGGGTCCGTCGGCGCTTGGCCGGAACGTGAATTACTTACACACAATCTTTCCGGCGAGGAGTATCACTGTATTGGACACGTTAGCCAATTTGGGTCTTCTCTTCTTCCTGTTTTTGGTGGGGTTGGAGTTGGACCCAAAAGCTCTCCGCCGTACCGGAAAACGAGCGATGTGCATTGCCTTTGCCGGAATCACTCTCCCGTTTGTCTTTGGCATTGGCACCTCATTTGTACTCCGATCGACCATCTCCAAAGGCGTCAATCAAGGTGCACTCCTCGTCTTCATGGGTGTAGCTCTTTCCATCACTGCGTTTCCTGTTCTGGCTAGAATTTTGGCTGAGCTTAAGCTTTTAACGACGGATGTTGGTCGGATGGCTATGTCGGCTGCCGCTGTTAACGACGTCGCGGCATGGATCCTTCTAGCATTGGCAATTTCACTCTCCGGCACCGGACATTCCCCTTTTGTTTCCTTGTGGGTTTTTCTCTCTGGCTCTGCTTTTGTCGTGCTTTGCATTTGCTCTGCTCCACCTCTGTTCCGGTGGATGTCGCAACGGTGCTCCGAAGGCGAGCCGGTGAAGGAGTTATACATTTGTGCTACTTTGTCTCTGGTTTTGGCGGCTGGGTTCATTACGGATTTGATCGGAATCCATGCCTTGTTCGGAGCTTTTGTGATCGGAGTTTTGGTTCCGAAAGAAGGCCCATTCGCCGTCGCTCTGGTGGAGAAAGTTGAAGATCTCGTGTCGGGTCTTTTTCTTCCATTATACTTCGTTTCCAGTGGATTGAAAACAGATGTTGCAACAATTCGAGGAGCTCAATCATGGGGTCTTCTCGTTTTAGTCATTTTCAATGCTAGTTTCGGTAAAATCGTCGGAACTGTCTCTGTTGCTCTGCTCTGCAAAATGCCATTTAAAGAATCAGTAGCTTTGGGGGTTTTGATGAACACGAAAGGCTTGGTGGAATTAATTGTTCTTAACATTGGAAGAGACAGGAAGGTTTTGAATGATCAATCATTTGCTATTATGGTTCTAATGGCGATCTTCACAACGTTCATAACAACCCCTGTTGTTATGGCTGTTTATAAGCCGGAGAAAAAACAGAGCAAATCAAATTACAAACATAGAACACTCGAAAGAGAAAATCCCAATTCTGAGCTTCGAATTCTTGCTTGTTTCCACTCATTTAGCAACATTCCGGCGACGATTAATTTAATCGAGGCATCCCGAGGGATTGAAAAGAAGGAAGGGCTCTGTGTTTATGCTCTGCATTTAATGGAGCTAACAGAGCGATCCTCTGCCATTCTTATGGTTCATAAAGCAAGGAAAAATGGCGTACCCTTTTGGAACAAAGGCCGTGCCGATTCAAACCAGATCGTCGTTGCCTTCGAGGCATTCCGACAGCTCAGCCGTGTTTCAATCCGGCCAATGACCGCCATTTCTGCTCTGTCCAACTTGCATGAAGACATCTGTAACAGCGCCGAGACGAAAAGGGCGGCCATTATAATTCTCCCGTTTCACAAGCATCAAAGATTGGATGGATCCATGGAAACGACAAGGACTGATTACCGGTCGGTCAACCGAAAAGTTCTGGAACTAGCTCCCTGCTCTGTCGGAATTTTGATCGACAGAGGCCTCGGTGGTGGGTCCCACGTCTGCGCTAGTAACGTCTCTTCCACTGTTACCGTGTTTTTCTTCGGCGGTCGTGACGATCGTGAAGCTCTAGCATTTGGTAAAAGAATGTCAGAGCATCCAGGAATCAGCCTACATGTCGTCCGGTTCTCCCCCAGCGCCGATTTCGCGGCGGAATCCGTCACCGTCGATGTAAAAGACAACGGTTCCACCGACGCCAATGCCGATAAAATGGCATTGGCGTCGATTGTATATGAAGAGAGATACGTGACGAAAGGGAGCCAAGCCGTTGAAGCGATGAAGGAGTTTAATAAATGTAATTTGATTTTGGTCGGAAGAACGCCGGAAGGGGAAGTGGTGAGGAGTTTGAATATGAATGTTGTGGAGGGTTCGGAACTTGGGCCGGTCGGCGGCGTGTTGGCGTTGCCGGAGTTCTCGACGATGGCGTCGGTGCTGGTGGTGCAGCAGTTTCATGGCGATTTACAGTTGATCGCGGATTCGGCTTCCAAAGGGGAATCAACTGAGGAAGAACGTTGA 2178 48.62 MAGGILLGPSALGRNVNYLHTIFPARSITVLDTLANLGLLFFLFLVGLELDPKALRRTGKRAMCIAFAGITLPFVFGIGTSFVLRSTISKGVNQGALLVFMGVALSITAFPVLARILAELKLLTTDVGRMAMSAAAVNDVAAWILLALAISLSGTGHSPFVSLWVFLSGSAFVVLCICSAPPLFRWMSQRCSEGEPVKELYICATLSLVLAAGFITDLIGIHALFGAFVIGVLVPKEGPFAVALVEKVEDLVSGLFLPLYFVSSGLKTDVATIRGAQSWGLLVLVIFNASFGKIVGTVSVALLCKMPFKESVALGVLMNTKGLVELIVLNIGRDRKVLNDQSFAIMVLMAIFTTFITTPVVMAVYKPEKKQSKSNYKHRTLERENPNSELRILACFHSFSNIPATINLIEASRGIEKKEGLCVYALHLMELTERSSAILMVHKARKNGVPFWNKGRADSNQIVVAFEAFRQLSRVSIRPMTAISALSNLHEDICNSAETKRAAIIILPFHKHQRLDGSMETTRTDYRSVNRKVLELAPCSVGILIDRGLGGGSHVCASNVSSTVTVFFFGGRDDREALAFGKRMSEHPGISLHVVRFSPSADFAAESVTVDVKDNGSTDANADKMALASIVYEERYVTKGSQAVEAMKEFNKCNLILVGRTPEGEVVRSLNMNVVEGSELGPVGGVLALPEFSTMASVLVVQQFHGDLQLIADSASKGESTEEER 725
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 3024313 3026498 + CmoCh16G006190.1 Cmo16g00619 399654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo16g00619 725 Pfam Sodium/hydrogen exchanger family 3 360 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Cmo16g00619 725 Gene3D - 1 375 IPR038770 -
Cmo16g00619 725 PANTHER CATION/H + ANTIPORTER 2 710 - -
Cmo16g00619 725 PANTHER CATION/H(+) ANTIPORTER 17 2 710 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo16g00617 Cmo-Chr16:3018587 Cmo16g00619 Cmo-Chr16:3024313 0 dispersed
Cmo16g00619 Cmo-Chr16:3024313 Cmo20g01059 Cmo-Chr20:9767041 0 dispersed
Cmo16g00619 Cmo-Chr16:3024313 Cmo16g00620 Cmo-Chr16:3029204 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo16g00619 - - csv:101202937 1189.48