Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo16g00640 ATGGCGCTTAAAGTTTATGCGGATCGGATGTCACAGCCATCTCGCGCCGTCCTCATCTTCTGCAAGGTTAACGGGATTGCATTTGAGGAGGTGCGGGTAGACTTGTCCAAACTCCAACAGCTGTCTCCCGAATTCAAAGAGGTCAACCCAATGGCAAAGGTTCCTGCCATTGTTGATGGGAGATTTAAGCTGTTCGAGAGTCATGCTATTCTTATCTACCTTTCTTGTGCGTTTCCTGGTGTGGCAGATCACTGGTATCCAGCCGATCTTTTCAAGAGGGCTAAAATAAACTCTGTATTGGACTGGCATCATTCTAATTTACGGATTGGTGCAGCTCCTTTTGTATTCTATACTGTTCTAGCACCTTTGTTTGGCCGTCCTCAGAATTCTCAAGCAGCTGCTGAAGCTGAGGTGCTTTTATCCAAGTCACTTTCGAAAATCGAGTCATTTTGGCTGAAGGGGAACGGGAAGTTTTTGGTAGGCGGCCTTAAACCATCCATAGCTGATCTAAGCTTGGTTTGTGAAATCATGCAACTAGAGCTTTTGGATGAGAAGGATCACAGTCGAATTCTGGGTCCGTACCAGAAAGTGAGGGAGTGGGTTGAGAATACTAGAAATGCTGCAAACCCACATTTTGATGAGGTTCATAAGCTTCTCTTTAAGCTCAAAGCAACCCTTCAAAAGCAGCGCTCAGAAAAATTGACTTCAAAGATGTGA 717 45.05 MALKVYADRMSQPSRAVLIFCKVNGIAFEEVRVDLSKLQQLSPEFKEVNPMAKVPAIVDGRFKLFESHAILIYLSCAFPGVADHWYPADLFKRAKINSVLDWHHSNLRIGAAPFVFYTVLAPLFGRPQNSQAAAEAEVLLSKSLSKIESFWLKGNGKFLVGGLKPSIADLSLVCEIMQLELLDEKDHSRILGPYQKVREWVENTRNAANPHFDEVHKLLFKLKATLQKQRSEKLTSKM 238
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 3156791 3160796 - CmoCh16G006400.1 Cmo16g00640 399675
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo16g00640 238 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 89 227 IPR010987 -
Cmo16g00640 238 SFLD Main.4: Theta-like 1 231 - -
Cmo16g00640 238 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 1 82 IPR004045 -
Cmo16g00640 238 Gene3D Glutaredoxin 1 82 - -
Cmo16g00640 238 Pfam Glutathione S-transferase, C-terminal domain 126 206 IPR004046 -
Cmo16g00640 238 CDD GST_N_Theta 3 78 IPR040075 -
Cmo16g00640 238 Gene3D - 83 238 - -
Cmo16g00640 238 SFLD Main (cytGST) 1 231 - -
Cmo16g00640 238 Pfam Glutathione S-transferase, N-terminal domain 1 74 IPR004045 -
Cmo16g00640 238 CDD GST_C_Theta 92 222 IPR040077 -
Cmo16g00640 238 PANTHER GLUTATHIONE S-TRANSFERASE T1-RELATED 1 233 IPR043377 -
Cmo16g00640 238 SUPERFAMILY GST C-terminal domain-like 83 217 IPR036282 -
Cmo16g00640 238 SUPERFAMILY Thioredoxin-like 2 87 IPR036249 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo08g00403 Cmo-Chr8:2501640 Cmo16g00640 Cmo-Chr16:3156791 2.47E-10 dispersed
Cmo16g00640 Cmo-Chr16:3156791 Cmo17g01082 Cmo-Chr17:8958042 1.16E-10 dispersed
Cmo16g00640 Cmo-Chr16:3156791 Cmo04g00779 Cmo-Chr4:3893619 5.74E-138 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo16g00640 K00799 - csv:101211608 420.239