Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo16g00649 ATGGAGAACAACCAAGCTCCTTCTTTCATGCTTGTTGTCGCTGTCGTGACAATTTATGTTGTGTTTTCAGCCATGGGGGAAGCTGATGATCAAAATTCCAAGGTTCATATTGTTTACTTGGGAGAAAGGCCGTACGATGATGTTACGTTGACAACTGATTCTCACCATGAATTATTGGAAAGTGTTTTGGGAAGCAAGGAGAAATCGTTGGAATCTATAGTGTATAGTTATAGACATGGCTTTTCTGGATTTGCCGCCAAGCTCACCAACTCTCAGGCCCAAAAGCTAGCACGAATGCCAATAGTGGCTCGAGTTTTTCCAAGTCCCTTATACAAAATGCGTACAACAAGAAGTTGGGATTTTCTCGGCCTCTCGTCTTCCCCATCTGCGTCCTCGAACCTTCTCCATCGAGCGAAAATGGGCGACAATGTCATAATAGGTGTCATTGATACAGGATTCTGGCCGGAATCGGAGTCATTCAATGACAAAGGAATGGGGCCAATACCATCCCGATGGAAAGGCATTTGCCAATCAGGGGAAGATTTCAATTCCTCACATTGCAACAAAAAGGTCATCGGAGCGCGTTGGTTCGCCAGTGCCTTAGTAGCCGACCATGGGGAGGAGGCGGTATTCATGGATTACTTATCTGCACGAGACAACGAAGGACATGGAACCCACACAGCCAGCACAGCCGGGGGTGCATTTGTAAGAAACGTCAGCTACTTTGGCAATGGGCGCGGCACGTTGAGAGGTGGCGCACCATTGGCACGGTTAGCCATATACAAAGTCCTGTGGAGTGATAGCCGATTAGGGTCAGGGGCGGACATATTGAAGGGCATAGATGAGGCCATTCACGACGGTGTGGATGTGCTGTCTATGTCAATTGGCAAATCAATTCCTCTGTTTTCGGATGTCAATGAATTGAACCCGGTCGCTGTTGGGTCGTTTCATGCCATTGCGAAGGGGATTTCTGTTGTGTGTGCGGGCGGGAATGAAGGCTCAATTCAACAGACGGTGGAAAACGTTGCACCGTGGCTTTTTACTGTGGCTGCGACTACTATCGATAGAGCCTTTCTTGCTTCTATTACTACTCTAGGAGATAACGCCACTTATTTGGGACAAACGTTTTTGAAAAAGGACATTGTCGGGATGCTGTTGGCTATGGACAGAAGATGTGCAGGGCTTTTGGGAAGTAATATCCCAATAAGTGGGAACGTGGTTCTTCTCTGCTTCACTGATTTAGCTAAGAAGGCGGGTGCATCCAACGTGGTGATGCCGGGGAAGCCAGCGAAAGTGGTTGGAATAATTTACGCCGGCCAACATAACGACATCTTGGGTCCTTGTGATACTCCATGCATCCATGTGGATACCCACGTTGGCACTCAATTATTCACTTACTACCTCAACGATGAGAAGGCATTTATAAGGGTGAGGGCCACACGAACCATAACCGGCAAGCCCATATCTTCTCGGATCGCTTATTTCTCATCCAGAGGTCCAAATTCTATTTCTCCCGGAATCCTCAAGCCTGACATAGCCGCTCCCGGAGCCAACATTATAGCTGCCGTTCCACCCAACCACGAGGGCGGTGACAAAGGGTTTGCAGTAATGTCAGGGACTTCCATGGCTGCGCCTCATATCTCTGGTATCGTCGCTCTTATTAAATCCTTACGTCCTACTTGGTCGCCCGCCGTCATTAAATCAGCCCTCATCACCACCGCTCGTGTAGAGGACCTATCAGGATTGCCAATTTTTGCTGAAGGAAGTCCACCGAAAGTGGCGGACCCATTTGACTATGGCGGCGGAGTGGTGGATGCCAACGCTGCCATCGACCCAGGTCTGATCTACGATCTAGAAGTCACGGATTACATATATTATTACCTGTGCAGCATGGGTTATACGGAGGCGGACATTTCTCACCTATCGCAGCAGAAAACAGTGTGTCCGTCGAAAAGGACCTCTATTTTGGATTTGAATCTGCCGACCATTACTGTACCGACACTGACAAACTCGACCACTGTGACTCGAACTGTGACGAATGTGGGGAACTTGACGGCGGTTTATAAGGCGGTGATTAAGGCTCCACCTGGGTCCAAGGTTAGAGTGAAGCCCCGGGTGTTGGTGTTCAATTCCAATGTGAAGAAGATTTCGTTTAAGGTTAAGTTTTCGAGTACTCTTCAAAGGAACTATGGGTACTCGTTTGGAAGCTTGACATGGACCGATGGTGTTCATCTTGTTAAAAGCCCTTTGTCTGTGCGTTTTGATTTCTTTTGA 2274 48.11 MENNQAPSFMLVVAVVTIYVVFSAMGEADDQNSKVHIVYLGERPYDDVTLTTDSHHELLESVLGSKEKSLESIVYSYRHGFSGFAAKLTNSQAQKLARMPIVARVFPSPLYKMRTTRSWDFLGLSSSPSASSNLLHRAKMGDNVIIGVIDTGFWPESESFNDKGMGPIPSRWKGICQSGEDFNSSHCNKKVIGARWFASALVADHGEEAVFMDYLSARDNEGHGTHTASTAGGAFVRNVSYFGNGRGTLRGGAPLARLAIYKVLWSDSRLGSGADILKGIDEAIHDGVDVLSMSIGKSIPLFSDVNELNPVAVGSFHAIAKGISVVCAGGNEGSIQQTVENVAPWLFTVAATTIDRAFLASITTLGDNATYLGQTFLKKDIVGMLLAMDRRCAGLLGSNIPISGNVVLLCFTDLAKKAGASNVVMPGKPAKVVGIIYAGQHNDILGPCDTPCIHVDTHVGTQLFTYYLNDEKAFIRVRATRTITGKPISSRIAYFSSRGPNSISPGILKPDIAAPGANIIAAVPPNHEGGDKGFAVMSGTSMAAPHISGIVALIKSLRPTWSPAVIKSALITTARVEDLSGLPIFAEGSPPKVADPFDYGGGVVDANAAIDPGLIYDLEVTDYIYYYLCSMGYTEADISHLSQQKTVCPSKRTSILDLNLPTITVPTLTNSTTVTRTVTNVGNLTAVYKAVIKAPPGSKVRVKPRVLVFNSNVKKISFKVKFSSTLQRNYGYSFGSLTWTDGVHLVKSPLSVRFDFF 757
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 3197033 3202288 - CmoCh16G006490.1 Cmo16g00649 399684
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo16g00649 757 ProSitePatterns Serine proteases, subtilase family, serine active site. 539 549 IPR023828 -
Cmo16g00649 757 PANTHER SUBTILISIN-LIKE PROTEASE SBT3.1-RELATED 22 753 - -
Cmo16g00649 757 Pfam Fibronectin type-III domain 657 752 IPR041469 -
Cmo16g00649 757 CDD Peptidases_S8_3 111 574 IPR034197 -
Cmo16g00649 757 PRINTS Subtilisin serine protease family (S8) signature 141 160 IPR015500 -
Cmo16g00649 757 PRINTS Subtilisin serine protease family (S8) signature 219 232 IPR015500 -
Cmo16g00649 757 PRINTS Subtilisin serine protease family (S8) signature 538 554 IPR015500 -
Cmo16g00649 757 SUPERFAMILY Subtilisin-like 11 685 IPR036852 GO:0004252|GO:0006508
Cmo16g00649 757 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 21 114 IPR037045 -
Cmo16g00649 757 Gene3D Peptidase S8/S53 domain 143 623 IPR036852 GO:0004252|GO:0006508
Cmo16g00649 757 Pfam Peptidase inhibitor I9 35 111 IPR010259 -
Cmo16g00649 757 Gene3D - 628 754 - -
Cmo16g00649 757 Gene3D - 355 484 - -
Cmo16g00649 757 ProSiteProfiles Serine proteases, subtilase domain profile. 118 610 - -
Cmo16g00649 757 Pfam Subtilase family 141 574 IPR000209 GO:0006508|GO:0008236
Cmo16g00649 757 PANTHER PEPTIDASE S8 22 753 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo15g00034 Cmo-Chr15:228372 Cmo16g00649 Cmo-Chr16:3197033 1.44E-10 dispersed
Cmo16g00021 Cmo-Chr16:116359 Cmo16g00649 Cmo-Chr16:3197033 0 dispersed
Cmo16g00649 Cmo-Chr16:3197033 Cmo16g00653 Cmo-Chr16:3225710 1.31E-145 dispersed
Cmo16g00654 Cmo-Chr16:3230904 Cmo16g00649 Cmo-Chr16:3197033 1.09E-15 dispersed
Cmo16g00649 Cmo-Chr16:3197033 Cmo16g00650 Cmo-Chr16:3205298 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo16g00649 - - csv:101219903 938.717