Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo16g00691 ATGGCTATGTCTCTGAGCTTTGTCTTTGCTTTGGCTCTTCTTGCCATGGCTTCTGGTGGTTTGTCTCATAAGATTGGCGGCGGAGGTGGCGGCGGGGGTGGTGGTGGTGGGTATTATTTGTATTCACAATTCTATGACCATTCTTGTCCAAGAGCTCAAGAGATAGTGAAGTACATAGTGGGTAAGGCTTTTGCTAAGGATCCTCGCATGGCTGCTTCCTTGCTTAGGCTTCATTTCCATGATTGCTTTGTTAAGGGCTGTGATGCCTCACTGTTGTTAGATAGTAGCGGGACAATAACGAGTGAAAAAAGATCAAACCCAAACAGAGACTCCGCTCGAGGCTTTGAAGTCATTGACGAGATCAAATTCGCCTTGGAAAAAGAGTGTCCTCGCACCGTTTCTTGTGCTGATATCTTAGCCATTGCTGCTAGAGACTCGACCGTCATAACAGGAGGACCCAGTTGGGAGGTTCCGTTAGGGCGAAGAGACTCAAGAGGAGCTAGCCTTAGTGGCTCAAACAATGACATTCCAGCTCCAAACAACACTTTCCAAACCATTCTCACCAAGTTCAAGAGACAAGGCCTCAACATAGTCGACCTTGTCGCTCTCTCAGGTAAAACTTAA 624 47.12 MAMSLSFVFALALLAMASGGLSHKIGGGGGGGGGGGGYYLYSQFYDHSCPRAQEIVKYIVGKAFAKDPRMAASLLRLHFHDCFVKGCDASLLLDSSGTITSEKRSNPNRDSARGFEVIDEIKFALEKECPRTVSCADILAIAARDSTVITGGPSWEVPLGRRDSRGASLSGSNNDIPAPNNTFQTILTKFKRQGLNIVDLVALSGKT 207
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 3419492 3420862 + CmoCh16G006910.1 Cmo16g00691 399726
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo16g00691 207 PRINTS Plant peroxidase signature 132 142 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo16g00691 207 PRINTS Plant peroxidase signature 113 126 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo16g00691 207 PRINTS Plant peroxidase signature 73 93 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo16g00691 207 PRINTS Plant peroxidase signature 49 68 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo16g00691 207 PRINTS Plant peroxidase signature 198 207 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo16g00691 207 PRINTS Plant peroxidase signature 151 166 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo16g00691 207 ProSiteProfiles Plant heme peroxidase family profile. 39 207 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo16g00691 207 Gene3D - 43 176 - -
Cmo16g00691 207 Gene3D Peroxidase, domain 2 177 206 - -
Cmo16g00691 207 PRINTS Haem peroxidase superfamily signature 71 85 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo16g00691 207 PRINTS Haem peroxidase superfamily signature 151 163 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo16g00691 207 PRINTS Haem peroxidase superfamily signature 133 150 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo16g00691 207 PRINTS Haem peroxidase superfamily signature 199 207 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo16g00691 207 ProSitePatterns Peroxidases active site signature. 71 82 IPR019794 GO:0004601
Cmo16g00691 207 SUPERFAMILY Heme-dependent peroxidases 40 205 IPR010255 GO:0004601|GO:0006979|GO:0020037
Cmo16g00691 207 PANTHER PEROXIDASE 72-RELATED 27 205 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo16g00691 207 PANTHER PEROXIDASE 27 205 - -
Cmo16g00691 207 Pfam Peroxidase 59 205 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo16g00691 Cmo-Chr16:3419492 Cmo19g00456 Cmo-Chr19:5523601 9.77E-68 dispersed
Cmo16g00691 Cmo-Chr16:3419492 Cmo03g00743 Cmo-Chr3:6291134 4.90E-93 wgd
Cmo16g00691 Cmo-Chr16:3419492 Cmo04g00821 Cmo-Chr4:4084751 1.15E-82 wgd
Cmo16g00691 Cmo-Chr16:3419492 Cmo07g00462 Cmo-Chr7:2107826 5.32E-19 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo16g00691 K00430 - csv:101223204 332.798