Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo16g00705 ATGGATACCCATTTGGAGGAGCTAAGGCAAAGCTTCAGAAATGGAAGAACAAGGAGCTTAGAATGGAGGAAAAAACAGCTGATTTCACTAATTCAGTTCATTCAAGACAAAGAAAACGCCATTTTTGAAGCTCTCTTCCAAGATCTTGGGAAGCATCCTGTCGAAATTTATAGAGATGAGGTTGGAATCGTTCTAAAATCTGCCAACAATGCTCTCTCCTGTTTACACAAATGGATCGCCCCTAAAAAGAAATACGTGCCATTACTGTTCTTCCCAGCAAAAGGGGAAGTTTTGCCTGAGCCATATGGTCTAGTCCTCATAATTTCATCATGGAACTTCCCCCTTTCTTTGGCATTGGATCCGTTAATCGGAGCGATATCAGCAGGCAACACGGCGGTTCTAAAACCGTCGGAGTACGCTCCAGCGTGCTCGTCTCTTCTCGCTGCGACGCTTCCTCTTTACCTCGACGATAAAGCCATCAAGGTCGTGGAGGGCGGAGCTGATATCAGTGAACAGCTTCTGCAGCAGAAGTGGGATAAGATCTTCTTCACTGGTAGTCCAAGTGTAGCTAAGATTGTGATGTCTGAAGCTGCAAAGCATCTAACTCCTGTAACATTGGAGCTTGGGGGAAAGTGTCCTGCAATCTTTGATTACTCCTCTGTTCATTCCAATATGAAGGTAGCTGCTAAGAGAATCGTCGGAGGAAAATGGGGACCGTGTTCGGGTCAGGCGTGTATTGGGATCGATTACTTGCTTGTTGAGGATAAGTTTGCTTCAGAATTGATCGAGTCGTTAAAGCGGGTGTTGAAGAAGTTTTACGGTGAAAACTCGAGAAATTCGACGAGTATAGCTCGGATTGTTAATGAGAAACATGTTGAAAGGATCAGTAATATGCTTAATGACCCTAAGGTTGCTGGTTGTATTGTCCATGGTGGTTTAATAGACAAACAAAAACGCTTCATTGAGCCGACAATATTGTTGAATCCTCCGATCGATGCTAATATCATGACCGAAGAAATCTTCGGTCCCGTGCTACCGATAATAACGTTGGACAAAATTGAAGAAAGCATCGAGTTCATCAATGCAAGACCGAAACCTCTAGCTATCTACGCCTTCACAGAAGATGAAACGCTAAAGAAACGGATTATATCCGAAACATCATCAGGAAGTGTCACGTTCAATGATACCATGGTTCAGTTTGTGTGCGATTCGCTACCATTCGGCGGTGTCGGTCAGAGCGGTTTCGGAAGTTACCATGGCAAGTATTCTTTTGATGCATTCAGCCATGACAAAGCAGTGTTGCAGAGAAGCTTTTTCATAGAACTCGAGCCACGATATCCGCCATGGAACGATTTCAAGCTCAAGTTCATTAGATTGGCTTATCGATTCGACTATTTCAGGCTCGTACTACTCCTTTTAGGGTTAAAAAAGTAG 1434 43.79 MDTHLEELRQSFRNGRTRSLEWRKKQLISLIQFIQDKENAIFEALFQDLGKHPVEIYRDEVGIVLKSANNALSCLHKWIAPKKKYVPLLFFPAKGEVLPEPYGLVLIISSWNFPLSLALDPLIGAISAGNTAVLKPSEYAPACSSLLAATLPLYLDDKAIKVVEGGADISEQLLQQKWDKIFFTGSPSVAKIVMSEAAKHLTPVTLELGGKCPAIFDYSSVHSNMKVAAKRIVGGKWGPCSGQACIGIDYLLVEDKFASELIESLKRVLKKFYGENSRNSTSIARIVNEKHVERISNMLNDPKVAGCIVHGGLIDKQKRFIEPTILLNPPIDANIMTEEIFGPVLPIITLDKIEESIEFINARPKPLAIYAFTEDETLKKRIISETSSGSVTFNDTMVQFVCDSLPFGGVGQSGFGSYHGKYSFDAFSHDKAVLQRSFFIELEPRYPPWNDFKLKFIRLAYRFDYFRLVLLLLGLKK 477
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 3511971 3514287 + CmoCh16G007050.1 Cmo16g00705 399740
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo16g00705 477 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 210 413 IPR016163 GO:0016620
Cmo16g00705 477 PIRSF ALDH 1 470 IPR012394 GO:0006081
Cmo16g00705 477 PANTHER ALDEHYDE DEHYDROGENASE FAMILY 3 MEMBER F1 4 477 - -
Cmo16g00705 477 PANTHER ALDEHYDE DEHYDROGENASE 4 477 IPR012394 GO:0006081
Cmo16g00705 477 SUPERFAMILY ALDH-like 2 449 IPR016161 GO:0016491
Cmo16g00705 477 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 9 431 IPR016162 GO:0016491
Cmo16g00705 477 Pfam Aldehyde dehydrogenase family 9 433 IPR015590 GO:0016491
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo02g01283 Cmo-Chr2:7648030 Cmo16g00705 Cmo-Chr16:3511971 0 dispersed
Cmo09g00775 Cmo-Chr9:3940010 Cmo16g00705 Cmo-Chr16:3511971 5.34E-160 dispersed
Cmo09g00776 Cmo-Chr9:3947115 Cmo16g00705 Cmo-Chr16:3511971 3.30E-164 dispersed
Cmo16g00705 Cmo-Chr16:3511971 Cmo17g00356 Cmo-Chr17:2168133 7.21E-45 dispersed
Cmo16g00705 Cmo-Chr16:3511971 Cmo01g01433 Cmo-Chr1:11208760 1.89E-163 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo16g00705 K00128 - csv:101221321 823.542