Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo16g00713 ATGGCGTATATGTGCACAGACAGTGGCAATTTAATGGCAATTGCACACCAAGTGATCAAGCAAAAACAACAGCAGGACCAACAGCAACATCACCTTTCTCCTCTTCTTCCTTGGACTAGTTCCAATCCTTCCCCAACAATGGCTTCTTCTTCTTCTTCTTCTCCTGCTTTCACCTTTGGGATTTCAGGTTCCGCCTTCTCCGACCCGTTTCAGGTTGCCGGAGCCGCTGATTCTACCGACCAGCCTTTTCATTTCTCAAATTTGGAGCACCCTTCCACCGGGTTTAGATTCTTCCCTAATTTTGGCGGCGGTGGTGGTGGAGAGTTTGAATCTGATGAATGGATGGACAGTTTAGTCGGCGGTAGAGATTCCACGGATAGCTCTGATCTTCCGTCTGGTTGTGATGATTATGGTGAGTTTGGTCTATATGGTGCGGATCCCTTTAATGGCTCTCCGCCGTCTCTGTTCTACCGAGAACTTCTCCCGGAAGGTTCGTACAAGACGAATAGCGTTCTGCCCCCGTTGCCTTCATCTCCACCACCAGTTAAGGATGCTGAAGTAGCTAATTCAATGGCGGGGAGTCTGCAGAAGAATAACGTCGTCGAAAGCTCGTCTAGTGCGCCGGAAATCGACTCCTCTTCGCCGCCGCTTCTGAAAGTCTTGCTCGATTGTGCGCGGCTTTGCGATTCTGAACCTGACCGAGCAGTAAAAACTCTTAATCGGATCAGTAAATCGTTACGAGAACATGGAGATCCTGTTGAACGAGTTGCGTTTCACTTCGGTGAGGCTCTTCGGAGCAGATTATCTCCGACGGCAATGAAGAACTGCTTGGTTACAAATGATGGCGACGCTAATTCCGAAGATTTCTTGCTCTCTTACAAAGCTTTGAACGATGCCTGTCCTTACTCGAAGTTCGCACATCTCACGGCCAACCAAGCGATTCTGGAAGCTACACAGACAGCCAGTAAAATTCACATTGTCGACTTCGGAATCGCTCAGGGCGTTCAATGGGCTGCGCTTCTGCAGGCTTTAGCCACGCGAGCCACCGGAAAGCCTATCAAAGTTCGTATCTCCGGAATACCCGCACCATCTCTCGGAGATTCACCGGCGGCATCTCTATGCGCCACTGGCAACAGACTCTCCGAGTTTGCAAAGCTTCTGGAACTGAATTTTGAGTTCGAACCGATTCTAACGCCGATTGAGGACCTAAACGAATCGAGCTTCCGCGTTCAATCGGATGAGGTGTTGGCCGTCAATTTCATGCTTCAATTGTACAATCTCCTCGACGAGGTTCCGACTGTAGTTCATAATGCTCTCTTATTAGCGAAATCGCTGAGCCCTAAAATATTGACTCTCGGTGAGTACGAGGCGAGCTTGAACAGAGTCGAATTCTACAATCGCTTCAAGAACGCATTAAAATTCTACTCCGCCATTTTCGAATCGCTAGAGCCAAACTTGCCGCGAGACTCTCCAGAAAGACACCAGTTAGAGAAACAGTTACTCGGCCGTCGAATCGCTGGCGTAGTTGGATCTGAAGAAGAATCAGGAAGCAAGAGAAGAAGAGTACGCATGGAAGCCAAAGAACAATGGAAGAATTTGCTGGAAAGCTCCGGATTCAAACCTGTAGCACTCAGCCATTACGCCATTAGTCAAGCGAAAATACTTTTATGGAACTACAATTACAGTTCTCTTTACACACTGATCGAATCGACGCCAGAGTTTCTGTCTCTAGCATGGAACGACGTTCCTCTCTTAACTGTATCTTCTTGGCGTTGA 1776 48.25 MAYMCTDSGNLMAIAHQVIKQKQQQDQQQHHLSPLLPWTSSNPSPTMASSSSSSPAFTFGISGSAFSDPFQVAGAADSTDQPFHFSNLEHPSTGFRFFPNFGGGGGGEFESDEWMDSLVGGRDSTDSSDLPSGCDDYGEFGLYGADPFNGSPPSLFYRELLPEGSYKTNSVLPPLPSSPPPVKDAEVANSMAGSLQKNNVVESSSSAPEIDSSSPPLLKVLLDCARLCDSEPDRAVKTLNRISKSLREHGDPVERVAFHFGEALRSRLSPTAMKNCLVTNDGDANSEDFLLSYKALNDACPYSKFAHLTANQAILEATQTASKIHIVDFGIAQGVQWAALLQALATRATGKPIKVRISGIPAPSLGDSPAASLCATGNRLSEFAKLLELNFEFEPILTPIEDLNESSFRVQSDEVLAVNFMLQLYNLLDEVPTVVHNALLLAKSLSPKILTLGEYEASLNRVEFYNRFKNALKFYSAIFESLEPNLPRDSPERHQLEKQLLGRRIAGVVGSEEESGSKRRRVRMEAKEQWKNLLESSGFKPVALSHYAISQAKILLWNYNYSSLYTLIESTPEFLSLAWNDVPLLTVSSWR 591
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 3569005 3570780 + CmoCh16G007130.1 Cmo16g00713 399748
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo16g00713 591 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 218 590 IPR005202 -
Cmo16g00713 591 MobiDBLite consensus disorder prediction 22 53 - -
Cmo16g00713 591 PANTHER SCARECROW-LIKE PROTEIN 4-RELATED 218 590 - -
Cmo16g00713 591 Pfam GRAS domain family 218 591 IPR005202 -
Cmo16g00713 591 ProSiteProfiles GRAS family profile. 208 591 IPR005202 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo07g00492 Cmo16g00713 CCT
Cmo03g00782 Cmo16g00713 CCT
Cmo04g00840 Cmo16g00713 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo07g00492 Cmo-Chr7:2224850 Cmo16g00713 Cmo-Chr16:3569005 0 dispersed
Cmo16g00713 Cmo-Chr16:3569005 Cmo04g03104 Cmo-Chr4:21588625 5.69E-60 dispersed
Cmo16g00706 Cmo-Chr16:3517368 Cmo16g00713 Cmo-Chr16:3569005 6.14E-26 proximal
Cmo16g00713 Cmo-Chr16:3569005 Cmo04g00840 Cmo-Chr4:4192956 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
11296 PF03514 GRAS 6.20E-107 CL0063 Cmo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo16g00713 - - cmos:111435912 1019.61