Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo16g00739 ATGACACACAAGAATGGGTTGATTTGGAGTGGGTTTATATGGTGGGAGCTGTGTCTCTCTTTCCCCTCTGCGGCGTCGATTCATGCAATTAACCTTCCGAATCTCACCAACCTTCCTTCTGACTCGCCGGAACCTCACCGAGCTGTGTCACTGACACACAGCTCTCCCGACGTTCCCCCAAACACTTCAAACATGTCCGTCGCCAACGCCGACATATCTCCAACTATGTTGGAGTCCTCGACGGTCAGGGATATTCCCGCCCTTGACATCGACAAGTGCAGCCCAGCGGACAGGGCTGAGTGGGTGACAAACCCACCAGAGCCGCCGGGAATTTGGCGAGACCTCCTCAACTCTCTCCGAGACACCATGTTTCCTAATCCGACCAAGCTTTTCTCCCCCAAAAGAAACACCGGAATTGCTCTGCTCGGTACCCTTTTGCAGGCCGTCTTCCCTATCCTCTCGTGGGGCCGGAGCTACAATCTCGCCATGTTCAAACACGACATCTTTTCCGGCCTGACCCTTGCCAGCCTCTGCATTCCCCAGAGCATTGGATATGCAAATCTGGCGAAGCTTGATCCACAATATGGCCTCTATACAAGCATTGTGCCGCCACTGGTTTATGCAGTATTAGGAACTTCAAGGGAAATAGCCATCGGCCCAGTGGCCATAGTATCTCTGCTTTTACCGTCGCTGATCGGGAAAATTCAAGATCCCGCCGCCGACCCACTTGCCTACAGAAACCTCATCTTCACCACCACTTTCTTCGCCGGAATCTTCCAAGCCGCCTTTGGGTTCTTACGGCTGGGATTTTTGGTCGATTTTCTATCACATGCCGCCATTGTTGGGTTCATGGGGGGAGCTGCCATTGTTATTGGGCTTCAACAGCTCAAAGGATTGCTTGGCCTCACTCACTTCACTAACAAAACTGATATCATCTCTGTTTTGGAAGCTGTGTTTGGATCATTCCGCCATGAAAATACTCGGTGGAACCCATTGAACTTCATCATTGGCTGCTCCTTCCTGTCGTTCATCCTCATCACCAGATTATTGGGAAAAAAGTACAAGAAATTATTCGGGTTAGCAGTCATAGCCCCACTGTTGTCTGTAATCCTCTCAACCCTTTTGGTGTTCCTCACAAGAGCCGACCAGCACGGCGTCAAGATCGTAAAACGAGTCCCCGCTGGGCTCAACCCCATCTCCGCTCGCCACCTCCAATTCCACAGCCCTCAAATCTCCCAAATCACCACCGCCTCCCTCATCGTCGCCGCTATAGCTCTCACAGAAGCTATTGCTGTCGGGAGATCCTTCGCCTCCATGAAAGGATACACCATTGATGGCAACAGAGAGATGGTTGCCTTAGGCTGCATGAACCTCGCCGGCTCTCTCACTTCTTGCTACACAGCCACCGGCTCCTTCTCCCGGACGGCCGTGAATTTCACTGCCGGTTGCCAGACGGCGGTTTCCAACATAGTAATGGCTGTGACGGTGATGATATCATTGGAGGTGTTAACTAAGCTGCTCTACTTCACTCCCAACGCCATTCTAGCCTCCATAATTCTGTCGGCACTTCCAGGCCTCATTGATTTTCATCAAGCTTACAATATCTGGAAAATCGACAAGCTCGACTTCTTCGCCTGCCTCGGAGCCTTCCTCGGAGTCCTCTTTCTATCCGTCGAGTTCGGCCTCCTCCTCTCGATTGTGATATCATTTGCAAAGATAATTCTAATCTCAATCAAACCTGGGACTGAGATTTTGGGTAAACTCCCTGGAACTGATACCTTTGGTGATATCCATCAATACCCAATGGCCCTCAACACTCCTGGAGTCCTCATCCTCCGTGTTAAATCTTCCTTGCTTTGCTTCGCAAATGCCAACTTCATCAAAGACAGGATTCTGAGGATGATCAGCAATGAAGAAGATGCATCAGGGAAGAGAGGCATTCAATTCCTAGTGATTGATTTCTCAAATTTAATGAACATTGATACTTCTGGAATTGGTTCTCTTGAAGAACTACAAAGTGGTTTGGGAGGCAGTGGAGTAGAGTTGGCCATTGCAAACCCAAAATGGGAAGTGATTCATAAGCTGAGGGTAGCAAATTTTGTTGGGAAGCTGAAAGGGAAGGTGTTCTTGAGTGTTGGGGAAGCTGTGGATGCATGTGTTGCAGCTAAATTGGGAGCCATGATCTAA 2187 49.7 MTHKNGLIWSGFIWWELCLSFPSAASIHAINLPNLTNLPSDSPEPHRAVSLTHSSPDVPPNTSNMSVANADISPTMLESSTVRDIPALDIDKCSPADRAEWVTNPPEPPGIWRDLLNSLRDTMFPNPTKLFSPKRNTGIALLGTLLQAVFPILSWGRSYNLAMFKHDIFSGLTLASLCIPQSIGYANLAKLDPQYGLYTSIVPPLVYAVLGTSREIAIGPVAIVSLLLPSLIGKIQDPAADPLAYRNLIFTTTFFAGIFQAAFGFLRLGFLVDFLSHAAIVGFMGGAAIVIGLQQLKGLLGLTHFTNKTDIISVLEAVFGSFRHENTRWNPLNFIIGCSFLSFILITRLLGKKYKKLFGLAVIAPLLSVILSTLLVFLTRADQHGVKIVKRVPAGLNPISARHLQFHSPQISQITTASLIVAAIALTEAIAVGRSFASMKGYTIDGNREMVALGCMNLAGSLTSCYTATGSFSRTAVNFTAGCQTAVSNIVMAVTVMISLEVLTKLLYFTPNAILASIILSALPGLIDFHQAYNIWKIDKLDFFACLGAFLGVLFLSVEFGLLLSIVISFAKIILISIKPGTEILGKLPGTDTFGDIHQYPMALNTPGVLILRVKSSLLCFANANFIKDRILRMISNEEDASGKRGIQFLVIDFSNLMNIDTSGIGSLEELQSGLGGSGVELAIANPKWEVIHKLRVANFVGKLKGKVFLSVGEAVDACVAAKLGAMI 728
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 3688494 3693533 - CmoCh16G007390.1 Cmo16g00739 399774
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo16g00739 728 PANTHER SULFATE TRANSPORTER 96 724 IPR001902 GO:0015301|GO:0016020|GO:0055085
Cmo16g00739 728 ProSiteProfiles STAS domain profile. 619 719 IPR002645 -
Cmo16g00739 728 Pfam STAS domain 600 715 IPR002645 -
Cmo16g00739 728 Gene3D STAS domain 579 722 IPR036513 -
Cmo16g00739 728 SUPERFAMILY SpoIIaa-like 606 719 IPR036513 -
Cmo16g00739 728 ProSitePatterns SLC26A transporters signature. 193 214 IPR018045 GO:0008271|GO:0008272
Cmo16g00739 728 PANTHER SULFATE TRANSPORTER 2.2 96 724 IPR030315 GO:0008272|GO:0015116
Cmo16g00739 728 CDD STAS_SulP_like_sulfate_transporter 600 704 - -
Cmo16g00739 728 Coils Coil 726 728 - -
Cmo16g00739 728 Pfam Sulfate permease family 164 547 IPR011547 GO:0016021
Cmo16g00739 728 MobiDBLite consensus disorder prediction 41 68 - -
Cmo16g00739 728 TIGRFAM sulP: sulfate permease 151 712 IPR001902 GO:0015301|GO:0016020|GO:0055085
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo16g00739 Cmo-Chr16:3688494 Cmo15g00746 Cmo-Chr15:3662569 0 dispersed
Cmo16g00739 Cmo-Chr16:3688494 Cmo04g02421 Cmo-Chr4:17976223 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo16g00739 K17469 - csv:116403192 988.023