Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo16g00795 ATGGCTGCCAATTTCGCCATGCTTAAACCTTGTTCCTCATTTTCGACCCCATCATTTGTTCAGACCAAATTTCGTACACATAGATTGTTATGCACTGGCCCATCTTCCTCTTATTATCCACGATGTCAAGGAGGAGCTTATGGTTTACGCGTCGTTAAATGTGCTTCTTCTAATGGTAAGGAGCCTGATTCGTTGGATGATGGAGTTAAAAGTGTGGAGCAGTTACTTAAAGAGAAACAGCGGGCAGAATTGTCTGCTCGGATCGCTTCTGGAGAATTCACAGTGGAAAAAGCTGGTTTTCCATCTGTGTTGAGGAGTGGGTTGTCAAAGATGGGTGTTCCTAGTGATATTCTGGATTTACTATTTGGTTTCATCAATGCTCAAGAACAATATCCCAAGATTCCTGAAGCTAAAGGATCATTAGATGCAGTTCGTAGTGAGGCTTTCTTCATACCTCTGTATGAACTTTATCTCACGTATGGTGGGATATTTAGATTGAGTTTTGGGCCAAAGTCGTTCTTGATTGTTTCTGATCCTTCCATTGCTAAACATATACTGAAGAATAATCCAAAGAATTATTCTAAGGGTATCTTAGCTGAAATTCTTGACTTTGTCATGGGGAAGGGACTTATACCAGCTGATGGAGAGATATGGCGTGTACGAAGACGGGCTATAGTCCCATCTTTGCATATGAAGTATGTAGGAGCTATGATTAATGTTTTTGGAGAAGCTGCAGATAGGCTTTGCAATAAGCTAGATGATGCAGCATCTAATGGTGTAGATGTGGAAATGGAGTCCCTCTTCTCCCGTCTGACTTTAGATATCATTGGCAAAGCAGTTTTTAACTATGACTTCGATTCACTTACAAACGACACTGGCATAGTTGAGGCTGTTTACACTGTTCTAAGAGAAGCCGAAGATCGCAGCGTTGCACCGATTCCGGTATGGGAAATTCCGATTTGGAAGGATATTTCTCCACGGCAAAAAAAGGTCTCTAAAGCCCTTAAATTGATCAATGAAACCCTCGATCAACTAATTGCTATATGCAAGAGGATGGTTGATGAGGAAGAGCTGCAGTTTCATGAAGAATACATGAACGAGCAAGATCCTAGCATACTTCATTTCCTCCTGGCATCGGGAGACGATGTTTCAAGCAAGCAGCTTCGTGATGACTTGATGACTATGCTCATAGCTGGGCATGAAACAACTGCTGCAGTTTTAACATGGACCTTTTATCTTCTTTCCAAGGAGCCTAGGATCATGGCCAAGCTCCAAGAGGAGGTTGATTCGGTCCTCGGGGATCGATTTCCAACCATCGAAGATATGAAGAACCTCAAATATGCCACACGAATAATTAACGAATCCTTGAGGCTTTATCCACAACCACCAGTTTTAATACGTCGATCTCTTGACAACGATACGCTCGGAAAGTACCCAATAAAGAAGGGTGAAGACATATTCATATCTGTTTGGAACTTACATCGCAGTCCAGAACTTTGGGATGATGCAGATAAATTTAATCCCGAAAGGTATTTGCCGTTCGGTGGTGGACCACGGAAATGTGTGGGAGACATGTTTGCTTTGTACGAGGCTGTTGTAGCACTTGCCATGCTTGTTCGGCGATTTGACTTCCAAATGGCACTTGGAGCACCTCCTGGTTTGGTCATTACTACAATCATCTCGGTAATTTGTGTGAGAGAGTCAGAGAAAATGGCAATGGCGACGATCCGATCCAATCTTCTTCGCGCCGCCTTCCGCGGTGCCTCACGAAACTCCGCTCAGCCTAAGCGCGGCTTCGCTTCCTCTGCTCACGACGATGCTCGTGAAACGGCAAAGTGGGAGAAGATTACTTATGCAGGCATTGTATCCTGCTCTATTTTAGCATTCTATAATCTATCAAAGGGCCACCCCCACTATGAAGAGCCCCCTGCATATCCATATTTGCACATTCGCAATAAAGAGTTCCCATGGGGTAAGCTTCCAAGTCATTACTAG 1995 43.66 MAANFAMLKPCSSFSTPSFVQTKFRTHRLLCTGPSSSYYPRCQGGAYGLRVVKCASSNGKEPDSLDDGVKSVEQLLKEKQRAELSARIASGEFTVEKAGFPSVLRSGLSKMGVPSDILDLLFGFINAQEQYPKIPEAKGSLDAVRSEAFFIPLYELYLTYGGIFRLSFGPKSFLIVSDPSIAKHILKNNPKNYSKGILAEILDFVMGKGLIPADGEIWRVRRRAIVPSLHMKYVGAMINVFGEAADRLCNKLDDAASNGVDVEMESLFSRLTLDIIGKAVFNYDFDSLTNDTGIVEAVYTVLREAEDRSVAPIPVWEIPIWKDISPRQKKVSKALKLINETLDQLIAICKRMVDEEELQFHEEYMNEQDPSILHFLLASGDDVSSKQLRDDLMTMLIAGHETTAAVLTWTFYLLSKEPRIMAKLQEEVDSVLGDRFPTIEDMKNLKYATRIINESLRLYPQPPVLIRRSLDNDTLGKYPIKKGEDIFISVWNLHRSPELWDDADKFNPERYLPFGGGPRKCVGDMFALYEAVVALAMLVRRFDFQMALGAPPGLVITTIISVICVRESEKMAMATIRSNLLRAAFRGASRNSAQPKRGFASSAHDDARETAKWEKITYAGIVSCSILAFYNLSKGHPHYEEPPAYPYLHIRNKEFPWGKLPSHY 664
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 4035464 4043350 + CmoCh16G007950.1 Cmo16g00795 399830
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo16g00795 664 SUPERFAMILY Cytochrome P450 146 560 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo16g00795 664 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 514 523 IPR017972 GO:0005506|GO:0016705
Cmo16g00795 664 PRINTS P450 superfamily signature 450 461 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo16g00795 664 PRINTS P450 superfamily signature 398 415 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo16g00795 664 PRINTS P450 superfamily signature 512 521 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo16g00795 664 PRINTS P450 superfamily signature 521 532 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo16g00795 664 Coils Coil 72 92 - -
Cmo16g00795 664 Pfam Cytochrome P450 154 547 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo16g00795 664 Gene3D Cytochrome c oxidase, subunit VIa 599 663 IPR036418 -
Cmo16g00795 664 PANTHER - 88 557 - -
Cmo16g00795 664 PANTHER CYTOCHROME P450 FAMILY 4 88 557 - -
Cmo16g00795 664 Gene3D Cytochrome P450 132 579 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo16g00795 664 SUPERFAMILY Mitochondrial cytochrome c oxidase subunit VIa 600 658 IPR036418 -
Cmo16g00795 664 PRINTS E-class P450 group I signature 387 404 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo16g00795 664 PRINTS E-class P450 group I signature 511 521 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo16g00795 664 PRINTS E-class P450 group I signature 521 544 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo16g00795 664 PRINTS E-class P450 group I signature 407 433 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo16g00795 664 PRINTS E-class P450 group I signature 157 176 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo16g00795 664 PRINTS E-class P450 group I signature 449 467 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo16g00795 Cmo-Chr16:4035464 Cmo10g00784 Cmo-Chr10:3635735 1.13E-46 dispersed
Cmo04g00652 Cmo-Chr4:3235812 Cmo16g00795 Cmo-Chr16:4035464 4.10E-137 transposed
Cmo07g00917 Cmo-Chr7:4397355 Cmo16g00795 Cmo-Chr16:4035464 5.67E-142 transposed
Cmo16g00795 Cmo-Chr16:4035464 Cmo04g00910 Cmo-Chr4:4577915 1.02E-53 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo16g00795 K15747 - csv:101215492 988.793