Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo16g00807 | ATGGTTCTTGTTGGTTCTTTGCAACTGTCCTATCATCTGGGACCGTGGAAAAACCATTTGCTTGAAGAAAATCTTAAGTTTACCTCTCATAGCAATAACATACGGTTACAGAATGTAGCCAGTCCATCGTCTCTTTTATTTCAGCAGAAGAACACTTGGAGTAGTCATTTATTTAGCTTGAAATACCCACCTAGTTACGTTGTGCCTTCTAGATACAATGCATTCAGGTGCCATTCGTCATTGATGACAAACCAACCACTGGATCCCTCTGGGATGAAGGCTGCTATAGTGGCGTTGACAAGGTTTTGTAATGTATTAGGTGGTTGTCCTCCTCCAGTTGTTAAGATGGTTCCTGCAGTTAGTATTATGATATTTGCTGTATGGGGTCTTGGACCATTTTTGCGTTATACAAGAAGCCTACTCCATAGTGATAGTAACTGGAAGAAAAGCCAGACATATAAAGTCATGACCTTGTATCTTCAACCATTATTGCTATGGACTGGAGCAACACTTATTTGCAGAGCTTTAGATCCAGTAGTTTTACCTACAGAGTCTAGCCAAGTTGTGAAGCAACGGGTGTTGAATTTTGTTAGGTCATTGTCCACTGTACTGGCCTTTGCGTATTGCTTATCTAGCATGATTCAACAAGCACAGAAATTCTTCTCAGAGACTAGTGAATCCAGTGATGCGAGAAATATGGGCTTTCAATTTGCTTGGAAAGCTGTGTACTCTGCAGTATGGGTTGCTGCTCTCTCATTGTTCATGGAGCTGTTAGGCTTTTCAACCCAAAAATGGCTTACAGCTGGAGGTCTTGGGACTGTGTTGCTGACATTAGCTGGCCGCGAGATTTTCACCAACTTTCTCTCAAGTGTAATGATTCATGCAACCCGTCCTTTCGTTGTAAATGAGTGGATCCAAACGAGGATCGAGGGCTATGAAGTTTCTGGAACTGTTGAGCATGTAGGGTGGTGGTCGCCAACGATCATTAGAGGTGAAGATCGTGAAGCAGTTCACATACCAAACCATAAATTTACCATGAATGTCGTGAGAAATCTCAGCCAAAAAACTCACTGGCGGATTAAAACCCACCTAGCCATCAGCCATTTGGATGTCAGTAAAATCAATAATATTGTCGCAGACATGCGGAAAGTCTTGGCAAAGAACCCTCAAGTTGAACAACAGAGATTGCATAGAAGAGTTTTTTTGGAAAACGTGAATCCTGAAAATCAGGCCCTTTTGATTTTGATATCTTGCTTTGTCAAGACTTCACATTTTGAAGAATACCTTTGTGTGAAGGAAGCTATATTTTTGGATCTTCTTAGAGTCATTAGACATCACCGAGCTCGACTTGCGACACCAATCCGCACAGTGCAGAAGATGCATAGTGATTCAGACTTGGAAAGCGTTCCATTTTCTGATTCAATATTTGGTCATGGTGGTGCGACTTTGAATCGTCGCATGCTGATGATTGAACCCCCCTACAAAGTTTATGGAGATGATCGAAAGCAAAGCCATAGTAGGACATCACGCACAACTGGAGAACAAAACGGTAAGCCCATTGCACGGTCATCAGGTGACAACAAGGCAGCTAAAGAGACAACACCATCGGAAAGAAAGACGGAAGTAAAGCCTGGAGAAGGACGAGACTCCGATGCAAAAATACATTCCAAAGTTCCGATGTCGACCTCTGAAGATAAACCAAGCAGTGAATCGAAACATAAATCATCATCAAGGTCTGTGTCGAGTACGAATGGTATCGCTGATATGCCAACTTCTGATGCCAAAACAACTCCATCAGATGCTGATAATTCAATGCAAGATTCTGGCTCCTCCAAGAAATCCAAAAATAGCTCAGGGAGTAACAACAAGCAGAACTACAAGCCTATCCATTCTTCTGTTTCCTTTCAGGAAGATGTCAAGAAACCAGAAGGAACTACTTCATCAGCTTCACAGCCAAGGATAGAAGGTGATCAGACGACGAATCCATCAACAACAAAGCCCGGCGTAGAAGAGAATATAATCCTCGGCGTTGCTTTGGATGGCTCTAAGAGAACACTCCCTATCGAGGACGACACGCCATCTTCCCCTCAAACGACGTTGGGAGCAAAAGATTTGGCTGCTGCATCCCTGAATGGGAACGGGGCGACTGGAGCAACAACTCCCGACAAGGAAACGAAACGGCTGTCTCCTCCTACCACATCTTCTATTGAATAA | 2214 | 43.22 | MVLVGSLQLSYHLGPWKNHLLEENLKFTSHSNNIRLQNVASPSSLLFQQKNTWSSHLFSLKYPPSYVVPSRYNAFRCHSSLMTNQPLDPSGMKAAIVALTRFCNVLGGCPPPVVKMVPAVSIMIFAVWGLGPFLRYTRSLLHSDSNWKKSQTYKVMTLYLQPLLLWTGATLICRALDPVVLPTESSQVVKQRVLNFVRSLSTVLAFAYCLSSMIQQAQKFFSETSESSDARNMGFQFAWKAVYSAVWVAALSLFMELLGFSTQKWLTAGGLGTVLLTLAGREIFTNFLSSVMIHATRPFVVNEWIQTRIEGYEVSGTVEHVGWWSPTIIRGEDREAVHIPNHKFTMNVVRNLSQKTHWRIKTHLAISHLDVSKINNIVADMRKVLAKNPQVEQQRLHRRVFLENVNPENQALLILISCFVKTSHFEEYLCVKEAIFLDLLRVIRHHRARLATPIRTVQKMHSDSDLESVPFSDSIFGHGGATLNRRMLMIEPPYKVYGDDRKQSHSRTSRTTGEQNGKPIARSSGDNKAAKETTPSERKTEVKPGEGRDSDAKIHSKVPMSTSEDKPSSESKHKSSSRSVSSTNGIADMPTSDAKTTPSDADNSMQDSGSSKKSKNSSGSNNKQNYKPIHSSVSFQEDVKKPEGTTSSASQPRIEGDQTTNPSTTKPGVEENIILGVALDGSKRTLPIEDDTPSSPQTTLGAKDLAAASLNGNGATGATTPDKETKRLSPPTTSSIE | 737 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
16 | 4154484 | 4162845 | + | CmoCh16G008070.1 | Cmo16g00807 | 399842 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo16g00807 | 737 | MobiDBLite | consensus disorder prediction | 712 | 737 | - | - | |
Cmo16g00807 | 737 | MobiDBLite | consensus disorder prediction | 496 | 737 | - | - | |
Cmo16g00807 | 737 | MobiDBLite | consensus disorder prediction | 574 | 668 | - | - | |
Cmo16g00807 | 737 | Pfam | Mechanosensitive ion channel | 241 | 447 | IPR006685 | GO:0016020|GO:0055085 | |
Cmo16g00807 | 737 | PANTHER | MECHANOSENSITIVE ION CHANNEL PROTEIN 2, CHLOROPLASTIC | 1 | 726 | - | - | |
Cmo16g00807 | 737 | SUPERFAMILY | Sm-like ribonucleoproteins | 283 | 353 | IPR010920 | - | |
Cmo16g00807 | 737 | Gene3D | - | 298 | 351 | IPR023408 | - | |
Cmo16g00807 | 737 | PANTHER | OW CONDUCTANCE MECHANOSENSITIVE CHANNEL | 1 | 726 | IPR045042 | - | |
Cmo16g00807 | 737 | MobiDBLite | consensus disorder prediction | 509 | 530 | - | - | |
Cmo16g00807 | 737 | MobiDBLite | consensus disorder prediction | 688 | 704 | - | - | |
Cmo16g00807 | 737 | Gene3D | - | 193 | 297 | - | - | |
Cmo16g00807 | 737 | MobiDBLite | consensus disorder prediction | 531 | 573 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo12g00153 | Cmo-Chr12:995821 | Cmo16g00807 | Cmo-Chr16:4154484 | 0 | dispersed | |
Cmo12g00881 | Cmo-Chr12:8017112 | Cmo16g00807 | Cmo-Chr16:4154484 | 1.28E-09 | dispersed | |
Cmo16g00807 | Cmo-Chr16:4154484 | Cmo05g00572 | Cmo-Chr5:2804121 | 0 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo16g00807 | K22047 | - | csv:101217250 | 1137.48 |