Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo16g00906 | ATGATCTCTTCTTTCACTCAATCTGCAAAACCCATTCATGGGTCTCACGTCGTTCACCGCCGGAGCTCTCCGGAGCCAATACGGCCGTTCTCTTGCCCACCTCCATTGCCGGCGCTAAAGCCCCAAGGCTTCGTTCTCTGTATGAAGAATGCCCTTCATATCTCTTCGGTTTCTAATTTCGGGCCATTGAGAACCCGGAAGAGTGATTTGGTTACGAGCAAAGCCTACGAGGCTGACCGATCGCACCCGATTGAGTCGAACGTTGAACTGACGGTAGCCGAAGCGCGAACAGAGGCGGCGAAGAAGGTGAAGATCGGACTCTATTTCGCTCTCTGGTGGGGTTTGAATGTCGTGTTCAACATTTACAACAAGAAGGTTCTGAATGCGTTTCCATATCCATGGCTAACCTCCACGCTTTCCCTCGCTGTTGGCTCTCTCATCATGCTTGTCTCTTGGATGACAAGGATCGCCGAGGCACCCACCACCGATTTTGAGTTCTGGAAATCTTTGTTCCCTGTAGCTGTGGCCCATACGATTGGGCATGTAGCGGCCACAGTGAGCATGTCAAAGGTTGCTGTCTCATTCACTCATATCATCAAGAGTGGTGAGCCTGCATTTAGTGTATTGGTTTCAAGGTTCCTGTTGGGTGAGACTTTCCCTGTTCCTGTCTACCTCTCTCTTCTACCGATCATCGGCGGTTGCGCGCTTGCTGCCGTGACCGAGCTTAACTTCAACATGACTGGTTTCATGGGAGCTATGATATCAAACTTGGCATTTGTGTTCAGAAACATATTTTCCAAGAAAGGCATGAAGGGGAAGGCTGTTAGCGGGATGAACTACTACGCCTGTTTGTCTATTCTGTCCCTTTTGATTCTTACCCCATTTGCTATTGCTGTCGAAGGACCGCAGATGTGGGCTGCAGGATGGAAAACTGCTGTCTCTCAGAATGGACCTAACTTTGTTTGGTGGGTAGCAGCTCAAAGTGTGTTCTATCATCTCTATAACCAAGTATCCTACATGTCTCTGGACGAAATTTCTCCCTTGACATTCAGCATTGGTAACACCATGAAACGTATATCGGTCATAGTTTCTGCAATCATCATCTTCCGCACACCCGTCCAACCCGTCAACGCTCTCGGAGCTGCGATCGCTGTTCTCGGGACCTTCTTATATTCACAGGCAAAACAATGA | 1191 | 48.95 | MISSFTQSAKPIHGSHVVHRRSSPEPIRPFSCPPPLPALKPQGFVLCMKNALHISSVSNFGPLRTRKSDLVTSKAYEADRSHPIESNVELTVAEARTEAAKKVKIGLYFALWWGLNVVFNIYNKKVLNAFPYPWLTSTLSLAVGSLIMLVSWMTRIAEAPTTDFEFWKSLFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLLGETFPVPVYLSLLPIIGGCALAAVTELNFNMTGFMGAMISNLAFVFRNIFSKKGMKGKAVSGMNYYACLSILSLLILTPFAIAVEGPQMWAAGWKTAVSQNGPNFVWWVAAQSVFYHLYNQVSYMSLDEISPLTFSIGNTMKRISVIVSAIIIFRTPVQPVNALGAAIAVLGTFLYSQAKQ | 396 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
16 | 5410802 | 5414245 | - | CmoCh16G009060.1 | Cmo16g00906 | 399941 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo16g00906 | 396 | PANTHER | GLUCOSE-6-PHOSPHATE/PHOSPHATE TRANSLOCATOR 2, CHLOROPLASTIC-LIKE | 29 | 396 | - | - | |
Cmo16g00906 | 396 | TIGRFAM | tpt: Tpt phosphate/phosphoenolpyruvate translocator | 104 | 395 | IPR004696 | GO:0016021|GO:0022857|GO:0055085 | |
Cmo16g00906 | 396 | MobiDBLite | consensus disorder prediction | 1 | 26 | - | - | |
Cmo16g00906 | 396 | PANTHER | SOLUTE CARRIER FAMILY 35 | 29 | 396 | - | - | |
Cmo16g00906 | 396 | SUPERFAMILY | Multidrug resistance efflux transporter EmrE | 295 | 393 | - | - | |
Cmo16g00906 | 396 | SUPERFAMILY | Multidrug resistance efflux transporter EmrE | 145 | 239 | - | - | |
Cmo16g00906 | 396 | Pfam | Triose-phosphate Transporter family | 104 | 392 | IPR004853 | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cmo01g01194 | Cmo16g00906 | CCT | |
Cmo09g00935 | Cmo16g00906 | CCT | |
Cmo01g01194 | Cmo16g00906 | ECH | |
Cmo09g00935 | Cmo16g00906 | ECH |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo06g01183 | Cmo-Chr6:9021392 | Cmo16g00906 | Cmo-Chr16:5410802 | 1.21E-100 | dispersed | |
Cmo09g00935 | Cmo-Chr9:4905641 | Cmo16g00906 | Cmo-Chr16:5410802 | 0 | dispersed | |
Cmo13g00914 | Cmo-Chr13:8091354 | Cmo16g00906 | Cmo-Chr16:5410802 | 2.26E-64 | dispersed | |
Cmo16g00906 | Cmo-Chr16:5410802 | Cmo03g00550 | Cmo-Chr3:5496170 | 5.60E-169 | dispersed | |
Cmo01g01194 | Cmo-Chr1:9681913 | Cmo16g00906 | Cmo-Chr16:5410802 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo16g00906 | K15283 | - | csv:101216838 | 704.901 |