Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo16g00906 ATGATCTCTTCTTTCACTCAATCTGCAAAACCCATTCATGGGTCTCACGTCGTTCACCGCCGGAGCTCTCCGGAGCCAATACGGCCGTTCTCTTGCCCACCTCCATTGCCGGCGCTAAAGCCCCAAGGCTTCGTTCTCTGTATGAAGAATGCCCTTCATATCTCTTCGGTTTCTAATTTCGGGCCATTGAGAACCCGGAAGAGTGATTTGGTTACGAGCAAAGCCTACGAGGCTGACCGATCGCACCCGATTGAGTCGAACGTTGAACTGACGGTAGCCGAAGCGCGAACAGAGGCGGCGAAGAAGGTGAAGATCGGACTCTATTTCGCTCTCTGGTGGGGTTTGAATGTCGTGTTCAACATTTACAACAAGAAGGTTCTGAATGCGTTTCCATATCCATGGCTAACCTCCACGCTTTCCCTCGCTGTTGGCTCTCTCATCATGCTTGTCTCTTGGATGACAAGGATCGCCGAGGCACCCACCACCGATTTTGAGTTCTGGAAATCTTTGTTCCCTGTAGCTGTGGCCCATACGATTGGGCATGTAGCGGCCACAGTGAGCATGTCAAAGGTTGCTGTCTCATTCACTCATATCATCAAGAGTGGTGAGCCTGCATTTAGTGTATTGGTTTCAAGGTTCCTGTTGGGTGAGACTTTCCCTGTTCCTGTCTACCTCTCTCTTCTACCGATCATCGGCGGTTGCGCGCTTGCTGCCGTGACCGAGCTTAACTTCAACATGACTGGTTTCATGGGAGCTATGATATCAAACTTGGCATTTGTGTTCAGAAACATATTTTCCAAGAAAGGCATGAAGGGGAAGGCTGTTAGCGGGATGAACTACTACGCCTGTTTGTCTATTCTGTCCCTTTTGATTCTTACCCCATTTGCTATTGCTGTCGAAGGACCGCAGATGTGGGCTGCAGGATGGAAAACTGCTGTCTCTCAGAATGGACCTAACTTTGTTTGGTGGGTAGCAGCTCAAAGTGTGTTCTATCATCTCTATAACCAAGTATCCTACATGTCTCTGGACGAAATTTCTCCCTTGACATTCAGCATTGGTAACACCATGAAACGTATATCGGTCATAGTTTCTGCAATCATCATCTTCCGCACACCCGTCCAACCCGTCAACGCTCTCGGAGCTGCGATCGCTGTTCTCGGGACCTTCTTATATTCACAGGCAAAACAATGA 1191 48.95 MISSFTQSAKPIHGSHVVHRRSSPEPIRPFSCPPPLPALKPQGFVLCMKNALHISSVSNFGPLRTRKSDLVTSKAYEADRSHPIESNVELTVAEARTEAAKKVKIGLYFALWWGLNVVFNIYNKKVLNAFPYPWLTSTLSLAVGSLIMLVSWMTRIAEAPTTDFEFWKSLFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLLGETFPVPVYLSLLPIIGGCALAAVTELNFNMTGFMGAMISNLAFVFRNIFSKKGMKGKAVSGMNYYACLSILSLLILTPFAIAVEGPQMWAAGWKTAVSQNGPNFVWWVAAQSVFYHLYNQVSYMSLDEISPLTFSIGNTMKRISVIVSAIIIFRTPVQPVNALGAAIAVLGTFLYSQAKQ 396
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 5410802 5414245 - CmoCh16G009060.1 Cmo16g00906 399941
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo16g00906 396 PANTHER GLUCOSE-6-PHOSPHATE/PHOSPHATE TRANSLOCATOR 2, CHLOROPLASTIC-LIKE 29 396 - -
Cmo16g00906 396 TIGRFAM tpt: Tpt phosphate/phosphoenolpyruvate translocator 104 395 IPR004696 GO:0016021|GO:0022857|GO:0055085
Cmo16g00906 396 MobiDBLite consensus disorder prediction 1 26 - -
Cmo16g00906 396 PANTHER SOLUTE CARRIER FAMILY 35 29 396 - -
Cmo16g00906 396 SUPERFAMILY Multidrug resistance efflux transporter EmrE 295 393 - -
Cmo16g00906 396 SUPERFAMILY Multidrug resistance efflux transporter EmrE 145 239 - -
Cmo16g00906 396 Pfam Triose-phosphate Transporter family 104 392 IPR004853 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo01g01194 Cmo16g00906 CCT
Cmo09g00935 Cmo16g00906 CCT
Cmo01g01194 Cmo16g00906 ECH
Cmo09g00935 Cmo16g00906 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo06g01183 Cmo-Chr6:9021392 Cmo16g00906 Cmo-Chr16:5410802 1.21E-100 dispersed
Cmo09g00935 Cmo-Chr9:4905641 Cmo16g00906 Cmo-Chr16:5410802 0 dispersed
Cmo13g00914 Cmo-Chr13:8091354 Cmo16g00906 Cmo-Chr16:5410802 2.26E-64 dispersed
Cmo16g00906 Cmo-Chr16:5410802 Cmo03g00550 Cmo-Chr3:5496170 5.60E-169 dispersed
Cmo01g01194 Cmo-Chr1:9681913 Cmo16g00906 Cmo-Chr16:5410802 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo16g00906 K15283 - csv:101216838 704.901