Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo16g00909 ATGCAATTTCCAATGCAAGGTTTGATCCACCTTTCCCTCCTTATTTCCCTGCTTCTTTTTTCCCATTTTTCTATCTGTTTCGGACAAGACTACATCATCGGCGACGGCGCCGGTACCGTCGGCGGTGGAGGTGGCGGTGGCGGTGGCGGTGCTGGTGCCGGCGAAGCCGACGCGAAGGGGGCAACACCACCGCCGGAGCAGAACAACTGCAATGGCATATTCTTGTCGTACACTTTCGTTTCGCGTGAGAAGGTGTTTCCCCGACTGAAAAACGTGACGGCTCAGCCATGGGCTTTCAGGTCGGAGGCGATGATTCTAAACGCCGGATCGACGGAGCTGAAGGCATGGAAGATGTTCATCGGCTTTCAAAACCACGAGATCCTGGTGTCAGTCAACGGCGCCGTGGTGATAGACGGGTCGGATTTCCCTGTGATGGTTGGGAATGGAACCACCTTGGCTGGTTACCCAATAACGGATCTGAAAACGTCGATTGAAACCGCCGGCAATATGGATGAGATTCAGGTGAACGTGGAGCTGGTCGGAACGATGTTCGGCATCAAGCCTCCTGGTTTTCCAATGCCTAAGACCATTAACCTTGTTAACGATGGGTACAAGTGCCCTGCGCCTCGCCGTCGCGGAAAAAGAACAATGCATATATGCTGCACAAAGGATCCAAAATTCAAGGTGAAAGCACCAGAGAAAACCAAATTTTTTCCTCGCCAAGATGGAGATCTCTCACTAACCTATGATGTAATGCAAGCTTATGGAAATAACTATCTTGCTCAAGTTACAATTGACAACAACAATCCCTTGGGCCGTCTGGATCACTGGAACTTAACATGGGAATGGATGAGAGGAGAGTTCATTCATAGCATGAGAGGAGCATATACTTATACAAGAGATATCTCTCAATGCATTTACGGTCCAACAGGCCAATTCTATCAAGATTTCGACTTCACCGGAGTCATGAGTTGTGATAAGAGGCCAGTGATCGCAGATCTCCCGGTGGAACGAAAGGACGATGACAAGATCGGAAAGTTGCCATATTGTTGTAGGAATGGAAGTTTGTTACCAACAATGATGGATGAAAGCAAAGCCAGGTCTATTTTTCAACTACATGTCTTTAAGCTTCCACCAGACATGAACAGAACAGCTCTTACTCCACCACAAAAATGGAAGATCACCGGCATTCTCAACCCGAAATACGTATGCGGGCCACCGCTCCGAGTCGATCCGACCGAGTTTCCAGACCCGAGTGGGCTTCAATCAACAAGTACAGCAGTTGCAAGTTGGCAAGTTGTGTGCAACATTACAAGGCCAAAGATGAAACAATCAAAATGCTGTGTTTCATTTTCAGCATATTATAATGACTCTGTGATTCCTTGCAATACTTGTGCATGTGGGTGTGAAGACATTGATACTGATACTTGCAATCCAAATGCAAAGGCAATGATGCTACCTCCAGAAGCTCTTTTGGTGCCATTTCATAACAGGACAGCCAAGGCAAGAGCTTGGGCTAGAATCAAGCGCTACCCAAATCCTAAAAAGTTGCCTTGTCCTGATAACTGTGGTGTTAGCTTGAATTGGCATATTAACTCAGATTATGCCGGTGGATGGACTGCAAGACTAACACTTTTCAACTGGGAAGATTACCCATTTGCGGATTGGTTCACTGCCGTTCGGTTGGACAAGGCCGGCCGTGGCTATGAAAACGTTTATTCCTTCAATGGCACCCTGCTTCCCAACCTCAAGAACACCATCTTCCTTCAAGGCTTGCCTGGTTTAACATACTTGATGGGGGAGGTCAATGGGACTCATCCTGAAGCCGACCCAAGAATTCCAGGGAAGCAGCAATCTGTGATTTCTTTCAACAAGAAGGGCATTCACGACTTCGACATACTACTCGGTGACGGTTTCCCGAATAAGGTTATTTTCAACGGCGAAGAATGTTCACTTCCGAGTGAAATTCCCTTGGCAAGTTCAGGCCAACACTCCAGCCATGCTCTTATGCCAATCATCTTCGTCTTAGCCATTACTTTCATGCATATCACACATTGCTTACATTGA 2067 47.27 MQFPMQGLIHLSLLISLLLFSHFSICFGQDYIIGDGAGTVGGGGGGGGGGAGAGEADAKGATPPPEQNNCNGIFLSYTFVSREKVFPRLKNVTAQPWAFRSEAMILNAGSTELKAWKMFIGFQNHEILVSVNGAVVIDGSDFPVMVGNGTTLAGYPITDLKTSIETAGNMDEIQVNVELVGTMFGIKPPGFPMPKTINLVNDGYKCPAPRRRGKRTMHICCTKDPKFKVKAPEKTKFFPRQDGDLSLTYDVMQAYGNNYLAQVTIDNNNPLGRLDHWNLTWEWMRGEFIHSMRGAYTYTRDISQCIYGPTGQFYQDFDFTGVMSCDKRPVIADLPVERKDDDKIGKLPYCCRNGSLLPTMMDESKARSIFQLHVFKLPPDMNRTALTPPQKWKITGILNPKYVCGPPLRVDPTEFPDPSGLQSTSTAVASWQVVCNITRPKMKQSKCCVSFSAYYNDSVIPCNTCACGCEDIDTDTCNPNAKAMMLPPEALLVPFHNRTAKARAWARIKRYPNPKKLPCPDNCGVSLNWHINSDYAGGWTARLTLFNWEDYPFADWFTAVRLDKAGRGYENVYSFNGTLLPNLKNTIFLQGLPGLTYLMGEVNGTHPEADPRIPGKQQSVISFNKKGIHDFDILLGDGFPNKVIFNGEECSLPSEIPLASSGQHSSHALMPIIFVLAITFMHITHCLH 688
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 5447441 5450067 - CmoCh16G009090.1 Cmo16g00909 399944
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo16g00909 688 PANTHER COBRA-LIKE PROTEIN 10 11 685 - -
Cmo16g00909 688 Pfam COBRA-like protein 259 438 IPR006918 GO:0010215|GO:0031225
Cmo16g00909 688 PANTHER COBRA-LIKE PROTEIN 7 11 685 - -
Cmo16g00909 688 MobiDBLite consensus disorder prediction 45 67 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo04g01012 Cmo16g00909 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo06g01549 Cmo-Chr6:10904370 Cmo16g00909 Cmo-Chr16:5447441 0 dispersed
Cmo14g01635 Cmo-Chr14:12978566 Cmo16g00909 Cmo-Chr16:5447441 0 dispersed
Cmo16g00909 Cmo-Chr16:5447441 Cmo04g00577 Cmo-Chr4:2880815 7.59E-29 dispersed
Cmo16g00909 Cmo-Chr16:5447441 Cmo04g01012 Cmo-Chr4:5083733 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo16g00909 - - csv:101216608 1146.72