Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo16g00975 | ATGTCTCTACAAAGCTATGTTGCACTCGAACGCCCTCGTTTTGTCGATCGAAAGCTCCTTGCTCGACCTCAACATGAAGGCTTCGGCGCTGTCGTAAGAAGAAGCATCGGCAGGTATGAACTCAAATACTTTGATCCATTCCTTGTTCTAGACGAGTTCTTTGTGACTCCACCAGCTGGTTTTCCTGATCATCCACATCGAGGATTTGAAACTGTCACCTACATGCTGCAGGGAGCAATGACACACGAAGATTTTCAAGGCCATAAAGGAACAATTGGAGCTGGCGACTTGCAATGGATGACTGCTGGCAAAGGCATTGTCCACTCTGAAATGCCTGCCTCCCATGGCACTCAACATGGCTTACAACTTTGGATCAATCTCTCCTCCAAACACAAAATGATAGAGCCGAGGTATCAAGAAGTACATAACAACGACGTAGTAGAAGCTAAAAAAGACGGAGTAAAAGTGAGAGTGATAGCGGGAGAAGCCATGGGAAAACGATCCCCAATTTACACCAAGACTCCGACCATGTACTTGGATTTCACACTAGACCCAGGATCTCACATCGAGCAGCCGATCCCAGTGGGATGGAACGCGTTCGTGTACGTGCTAGAAGGCGAGGACGGAGTGTTCGGGAGCGTGAAATCGATGCCGATTGCATCACATCACATTCTTTTGTTAGGGAGTGGGGATGGATTGGAGGCTTGGAACAAGTCTTCCTCTGAAGCCCTAAGGTTTATATTGGTTGGGGGTGAGCCATTGAATGAGAGTGTTGTGCAGATGGGGCCATTTGTGATGAACACTGAAGAAGAGATTGACCAAACCATTGAGGATTTTGAGAATGGTACCAATGGGTTTGAGAGAGCAAAGCATTGGAGTTCACAAGCTTAA | 891 | 47.14 | MSLQSYVALERPRFVDRKLLARPQHEGFGAVVRRSIGRYELKYFDPFLVLDEFFVTPPAGFPDHPHRGFETVTYMLQGAMTHEDFQGHKGTIGAGDLQWMTAGKGIVHSEMPASHGTQHGLQLWINLSSKHKMIEPRYQEVHNNDVVEAKKDGVKVRVIAGEAMGKRSPIYTKTPTMYLDFTLDPGSHIEQPIPVGWNAFVYVLEGEDGVFGSVKSMPIASHHILLLGSGDGLEAWNKSSSEALRFILVGGEPLNESVVQMGPFVMNTEEEIDQTIEDFENGTNGFERAKHWSSQA | 296 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
16 | 6636999 | 6638446 | + | CmoCh16G009750.1 | Cmo16g00975 | 400010 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo16g00975 | 296 | PIRSF | Pirin | 11 | 293 | IPR012093 | - | |
Cmo16g00975 | 296 | Gene3D | Jelly Rolls | 26 | 280 | IPR014710 | - | |
Cmo16g00975 | 296 | SUPERFAMILY | RmlC-like cupins | 14 | 294 | IPR011051 | - | |
Cmo16g00975 | 296 | CDD | cupin_pirin_C | 175 | 253 | - | - | |
Cmo16g00975 | 296 | Pfam | Pirin | 32 | 125 | IPR003829 | - | |
Cmo16g00975 | 296 | CDD | cupin_pirin_N | 30 | 127 | - | - | |
Cmo16g00975 | 296 | Pfam | Pirin C-terminal cupin domain | 178 | 285 | IPR008778 | - | |
Cmo16g00975 | 296 | PANTHER | PIRIN-RELATED | 6 | 296 | IPR012093 | - | |
Cmo16g00975 | 296 | Gene3D | Jelly Rolls | 147 | 254 | IPR014710 | - | |
Cmo16g00975 | 296 | PANTHER | - | 6 | 296 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cmo09g00982 | Cmo16g00975 | CCT | |
Cmo01g01145 | Cmo16g00975 | CCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo01g01145 | Cmo-Chr1:9388579 | Cmo16g00975 | Cmo-Chr16:6636999 | 4.30E-167 | dispersed | |
Cmo06g01619 | Cmo-Chr6:11308243 | Cmo16g00975 | Cmo-Chr16:6636999 | 1.68E-143 | dispersed | |
Cmo14g01545 | Cmo-Chr14:12339913 | Cmo16g00975 | Cmo-Chr16:6636999 | 1.54E-16 | dispersed | |
Cmo16g00975 | Cmo-Chr16:6636999 | Cmo09g00982 | Cmo-Chr9:5209836 | 2.49E-161 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo16g00975 | K06911 | - | csv:101204082 | 492.656 |