Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo16g00981 | ATGCCTGGTGTAACGACGGAGTCGTCCGAGAAGGACTCGGAGCCGTTTGTCGAAGTGAATCCAACGGGTCGATACGGGCGATACGGCGAGCTTCTAGGGTCGGGAGCGGTGAAGAAAGTGTACCGAGCGTTTGATCAAGAAGAAGGAATTGAGGTAGCTTGGAATCAAGTGAAATTAAGAAGCTTTTCAAATGATCCATCCATGATTGATAGGCTTTACTCGGAGGTGACATTGCTAAGAACCTTAAAGAACAATAACATCATTGCTTTGTACGATGTATGGCTTGACAAACTTCATGGAACCTTAAATTTCATTACCGAGGTTTGTACAAGTGGGAATCTTAGAGAATATAGGAAGAAACATAGGCAAGTTTCTTTGAAAGCCTTGAAGAAATGGTGTAAGCAAATTCTTAAGGGTTTGCATTATTTGCATACTCATGAGCCTTGTGTTATTCATAGAGATCTCAATTGTAGCAACCTCTTTGTCAATGGCAATGTTGGGCAGGTACTCATTCATGAACTTGGGCTAATCTTGAGCTTAATAATTGGCTTAATTTTAGGGTTTTCTCATGATTTTGGCTACAAATTTGTTGTCATGGTGAAGATTGGTGATTTGGGTATGGCTGCAACGGTGGGGAAGAATCACTCAGCTCATTCAGTGCTTGGGACACCGGAATTCATGGCACCTGAGCTATATGAAGAGCATTACACCGAGCTTGTGGACATATATTCATTTGGCATGTGTTTGCTTGAATTGGTCACCTTGGAAATTCCCTATAGTGAATGTGATAACGTTGCGAAAATCTATAAGAAAGTATGCTCGGGCATCAAGCCGTTGGCACTCGACAAGGTCAAGGACCTTGAGGTGAAGGCTTTCATTGAGAATTGCCTTGCTCCGTCTCAAGATCGGCCCTCGGCTGCTGACCTCCTCCGCCACTCGTTTTTCAGTGAAATTGACGAAGACGACGACGACGAGGATAGTAATGATCGTTAG | 993 | 43.5 | MPGVTTESSEKDSEPFVEVNPTGRYGRYGELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRSFSNDPSMIDRLYSEVTLLRTLKNNNIIALYDVWLDKLHGTLNFITEVCTSGNLREYRKKHRQVSLKALKKWCKQILKGLHYLHTHEPCVIHRDLNCSNLFVNGNVGQVLIHELGLILSLIIGLILGFSHDFGYKFVVMVKIGDLGMAATVGKNHSAHSVLGTPEFMAPELYEEHYTELVDIYSFGMCLLELVTLEIPYSECDNVAKIYKKVCSGIKPLALDKVKDLEVKAFIENCLAPSQDRPSAADLLRHSFFSEIDEDDDDEDSNDR | 330 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
16 | 6714689 | 6715930 | - | CmoCh16G009810.1 | Cmo16g00981 | 400016 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo16g00981 | 330 | PANTHER | SERINE/THREONINE-KINASE WNK11-LIKE PROTEIN | 190 | 329 | - | - | |
Cmo16g00981 | 330 | PANTHER | SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED | 2 | 177 | - | - | |
Cmo16g00981 | 330 | Gene3D | Phosphorylase Kinase; domain 1 | 9 | 107 | - | - | |
Cmo16g00981 | 330 | PANTHER | SERINE/THREONINE-KINASE WNK11-LIKE PROTEIN | 2 | 177 | - | - | |
Cmo16g00981 | 330 | Pfam | Protein kinase domain | 30 | 315 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cmo16g00981 | 330 | Gene3D | Transferase(Phosphotransferase) domain 1 | 109 | 321 | - | - | |
Cmo16g00981 | 330 | ProSiteProfiles | Protein kinase domain profile. | 26 | 315 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cmo16g00981 | 330 | PANTHER | SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED | 190 | 329 | - | - | |
Cmo16g00981 | 330 | SUPERFAMILY | Protein kinase-like (PK-like) | 21 | 320 | IPR011009 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo16g00981 | Cmo-Chr16:6714689 | Cmo20g00670 | Cmo-Chr20:3271666 | 1.41E-156 | dispersed | |
Cmo06g00880 | Cmo-Chr6:5019086 | Cmo16g00981 | Cmo-Chr16:6714689 | 0 | transposed | |
Cmo16g00981 | Cmo-Chr16:6714689 | Cmo02g00223 | Cmo-Chr2:1026703 | 1.88E-154 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
74977 | PF00069 | Pkinase | 6.00E-46 | CL0016 | Cmo | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo16g00981 | K08867 | - | csv:101221172 | 509.22 |