Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo16g01017 ATGCAGCCATACATCGTATACCTCGGATCACATTCTCATGGTTCGAGTCCTTCCTCGTTGGATCTCCAACTTGTAACAAAATCTCATTATGATTTACTAGGATCAGTGTTGGGAAGCAAAGAGATAGCCAAGGAAGCTATTTTCTACTCATACAACAGATATATCAATGGCTTCGCCGCAATGCTCAATGAAAAACAAGCCGCAGATCTTGCAAGAATTCCAAATGTGATTTCTGTTTTTGAAAATAAGGAGAGACAACTACACACAACAAGATCATGGGATTTTCTTGGACTAGAAACACAAGGAGTTCCTTCCGACTCTATTTGGAATGTTACAAGGTTTGGTAAAGATGCAATTATAGCTAACATTGACACAGGTGTTTGGCCAGAATCTAAGAGCTTCAGTGACGAAGGATATGGGCCCGTCCCTTCAAGGTGGCTGGGCAGTTGTCGAAGTGGCGCTGACCCCAACTTCCATTGCAACAGGAAGCTAATTGGAGCAAGGTTCTTTAACTTAGCCAATGGTCCACTCAATGGCAGCCTCAATTCTCCAAGGGACCATCAAGGCCACGGAACCCACACTTTATCCACGGCTGGGGGCAACTTTGTCTCTGGAGCTAATGTTTTTGGCTACGCAAATGGAACTGCCAAAGGTGGCTCACCTCGAGCCCGTGTTGCGTCCTACAAGGTCTGTTGGGAAGCGGAAGGTGGAGGGTGTTTTGACGTGGATATCTTAGCTGCCTTCGAAGCTGCCATTGGTGATGGGGTTGACGTTATCTCAGCTTCTCTTGGTGCAATTCCCTCAGACTTCCTAGACGATGGGCTATCTATAGGGGCCTTTCATGCAGTTCAGCATGGCATCGTTGTTGTTTGTTCGGCTGGAAACTTAGGACCAGATCCTACAAGTGTATCAAACGTATCGCCATGGATGTTAACCGTTGGAGCTAGTACCATTGATAGGGAGTTCACAAATTTCATAGTCCTAGGGAACAACAAGAAACTCAAGGGTGCAAGCCTTTCTTCTAAGGCATTAACAGATGACAAGTTCTACCCTTTAATCAACGCTGTGGATGCAAAAGCCAACAATGTCCCAGAACTTGCGGCGGAAGTGTGTGATGAGGGAACACTTGACCCCACCAAATTGAATGGGAAGATTGTGGTGTGCGTTGTTGGGGTTATTGCAAGAGTGACCAAAGGTTACTTAGCAGCTCAAGCAGGGGCGGTTGGGATGATCTTGGTTAACGATGAAGAGAGTGGGAATGAGATTAAAGCTGATCCACACATCATTCCAGCATCCCATGTAACCTATAATGACAGTATAACCATCTCTCAATATATCAGCTCTACAAGAACACCCATGGCTTACATCAGTTCGGTAACGGCAAAGCTCGGTGTCACGCCAGCCCCAACCGTGGCTAGGTTCTCAGGAAGAGGCCCAAGTATAATCGAGGAGTCAATCCTCAAGCCAGATATAATAGCACCAGGTGTGAATATAATTGCGGCTTACCCCGATGGAATACCATTGGCAAATCTGCCCGTTGATGATCGTCGAGGTCCTTTTATGGTATACTCTGGCACATCCATGTCTTGCCCCCATGTTTCTGGCATTGTAGGCCTTCTCAAAACCCTAAATCCCAAATGGAGTCCAGCCGCCATTAAATCAGCAATTATGACCACAGCCAAAACAAGAGACAGCAGCTTACATCCAATTGTCGACCTCGACGGAGTGATAGCAACTCCATTAGCATACGGCGCAGGACATGTTCATCCAAACAGCGCGATGGACCCTGGCCTCGTTTACGACATTACAATCGACGATTACCTAAATTTCTTGTGCTCTCGAGGCTACAATGCAACGCAAATGAAAAAATTCTCAAACAATACATTCGTTTGCAATAAATCATTCAAAGTGACTGACCTTAATTATCCATCCATCTCAGTCGCGGATTTGAAAACAGGCCCTGTGACGATCAATCGAAAGGTGAAGAACGTGGGAAGTCCAGGGAAGTATGTTGCTCGAGTAACGTCGCCTTTGGAAGTTTCAATCGTGGTTGAGCCGAGTACATTGCAATTTAGCGCCATGGATGAAGAGAAGAGCTTCAGGGTTGTGTTGCAGAGAAGTGGAAAGGGAAATCAACAAGGTTATGTGTTCGGAACATTGGAATGGTCAGATGGGAAACACAGTGTTAGAAGCCCCATTGCTTTCAATTTGGGGAAATAG 2220 45.9 MQPYIVYLGSHSHGSSPSSLDLQLVTKSHYDLLGSVLGSKEIAKEAIFYSYNRYINGFAAMLNEKQAADLARIPNVISVFENKERQLHTTRSWDFLGLETQGVPSDSIWNVTRFGKDAIIANIDTGVWPESKSFSDEGYGPVPSRWLGSCRSGADPNFHCNRKLIGARFFNLANGPLNGSLNSPRDHQGHGTHTLSTAGGNFVSGANVFGYANGTAKGGSPRARVASYKVCWEAEGGGCFDVDILAAFEAAIGDGVDVISASLGAIPSDFLDDGLSIGAFHAVQHGIVVVCSAGNLGPDPTSVSNVSPWMLTVGASTIDREFTNFIVLGNNKKLKGASLSSKALTDDKFYPLINAVDAKANNVPELAAEVCDEGTLDPTKLNGKIVVCVVGVIARVTKGYLAAQAGAVGMILVNDEESGNEIKADPHIIPASHVTYNDSITISQYISSTRTPMAYISSVTAKLGVTPAPTVARFSGRGPSIIEESILKPDIIAPGVNIIAAYPDGIPLANLPVDDRRGPFMVYSGTSMSCPHVSGIVGLLKTLNPKWSPAAIKSAIMTTAKTRDSSLHPIVDLDGVIATPLAYGAGHVHPNSAMDPGLVYDITIDDYLNFLCSRGYNATQMKKFSNNTFVCNKSFKVTDLNYPSISVADLKTGPVTINRKVKNVGSPGKYVARVTSPLEVSIVVEPSTLQFSAMDEEKSFRVVLQRSGKGNQQGYVFGTLEWSDGKHSVRSPIAFNLGK 739
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 7020890 7024290 - CmoCh16G010170.1 Cmo16g01017 400052
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo16g01017 739 SUPERFAMILY Subtilisin-like 87 598 IPR036852 GO:0004252|GO:0006508
Cmo16g01017 739 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 3 738 IPR045051 -
Cmo16g01017 739 PRINTS Subtilisin serine protease family (S8) signature 186 199 IPR015500 -
Cmo16g01017 739 PRINTS Subtilisin serine protease family (S8) signature 524 540 IPR015500 -
Cmo16g01017 739 PRINTS Subtilisin serine protease family (S8) signature 115 134 IPR015500 -
Cmo16g01017 739 Pfam PA domain 371 438 IPR003137 -
Cmo16g01017 739 Gene3D - 319 463 - -
Cmo16g01017 739 Gene3D - 611 737 - -
Cmo16g01017 739 Pfam Peptidase inhibitor I9 4 88 IPR010259 -
Cmo16g01017 739 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 1 88 IPR037045 -
Cmo16g01017 739 CDD PA_subtilisin_like 326 456 - -
Cmo16g01017 739 SUPERFAMILY PA domain 378 441 IPR046450 -
Cmo16g01017 739 ProSiteProfiles Serine proteases, subtilase domain profile. 92 594 - -
Cmo16g01017 739 ProSitePatterns Serine proteases, subtilase family, serine active site. 525 535 IPR023828 -
Cmo16g01017 739 PANTHER SUBTILISIN-LIKE PROTEASE SBT5.4 3 738 - -
Cmo16g01017 739 Pfam Subtilase family 115 584 IPR000209 GO:0006508|GO:0008236
Cmo16g01017 739 CDD Peptidases_S8_3 86 560 IPR034197 -
Cmo16g01017 739 Gene3D Peptidase S8/S53 domain 117 607 IPR036852 GO:0004252|GO:0006508
Cmo16g01017 739 Pfam Fibronectin type-III domain 639 734 IPR041469 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo05g00488 Cmo-Chr5:2294562 Cmo16g01017 Cmo-Chr16:7020890 3.25E-174 dispersed
Cmo06g00709 Cmo-Chr6:3607104 Cmo16g01017 Cmo-Chr16:7020890 0 dispersed
Cmo06g00714 Cmo-Chr6:3638578 Cmo16g01017 Cmo-Chr16:7020890 0 dispersed
Cmo09g01137 Cmo-Chr9:6574534 Cmo16g01017 Cmo-Chr16:7020890 5.42E-11 dispersed
Cmo16g01017 Cmo-Chr16:7020890 Cmo16g01043 Cmo-Chr16:7274088 0 dispersed
Cmo16g01017 Cmo-Chr16:7020890 Cmo16g01018 Cmo-Chr16:7032614 0 tandem
Cmo16g00021 Cmo-Chr16:116359 Cmo16g01017 Cmo-Chr16:7020890 1.89E-164 transposed
Cmo19g00850 Cmo-Chr19:8248897 Cmo16g01017 Cmo-Chr16:7020890 0 transposed
Cmo16g01017 Cmo-Chr16:7020890 Cmo06g00705 Cmo-Chr6:3575305 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo16g01017 - - csv:101212014 972.615