Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo16g01018 ATGCAGTCGACTGAAGCTTCCACTTCTATGGAAGTGGAAACGGTCTCAACCGAAACAAAGAATGTGGTTAGCACATTGCCACCGAAACCACAGTTTGATCCCCTAAAGCCTCATGAGATGAATGATGGACGAATCCAGTTCCGAAAGGTCTCTGTTCCTCCGCATCGCTATACGCCTCTCAAGAAAGCATGGATGGAGATTTACACCCCAATTTATGAACAGATGAAAATCGACATCCGAATGAATCTCAAGGCGCGTAAAGTCGAGTTGAAAACCAGAGCAGACACACCTGACATTAGTAACTTACAGAAGTGTGCAGATTTTGTTCATGCTTTCATGCTTGGATTCGATGTGATCGATGCCATTGCCCTCCTAAGGGTGGATGAACTCTATGTTGAATCTTTTGAGATTAAGGATGTTAAAACGCTACGAGGCGAGCACTTGTCGCGTGCCATAGGCAGATTGTCTGGTAAAGCTGGTAAGACCAAATTCGCCATCGAAAACGCCACGAAGACGAGGATCGTTATTGCAGACACCAAGATTCACATATTAGGATCCTTTGCAAATATCAAGATTGCAAGGGATTCTCTTTGCAGCCTGATTTTAGGGTCCCCTGCAGGTAAAGTTTATTCAAAACTAAGGGCGGTTACAGCCAGATTAGCAGAAAGCAAAGAGATAGCCAAGGAAGCTATTTTCTACTCATACAACAGATATATCAATGGCTTCGCCGCAATGCTCAATGAAATACAAGCAGCAGATCTTGCAAGAATTCCAAATGTGATTTCTATTTTTGAAAGTAAGGAAAGACAATTGCACACAACAAGATCATGGGATTTTCTTGGACTAGAAACACAAAAAACAGTTCCTTCCGACTCTATTTGGAAGGTTACGAGGTTTGGTGAAGATGCAATTATAGCTAACTTTGACACAGGTGTTTGGCCAGAATCTAAGAGTTTCAGTGACGAAGGATATGGGCCCATCCCTACGAGGTGGATGGGCAGTTGTCAAAGTGGCGCTGACCCCAACTTCCGTTGCAACAGGAAGCTAATTGGAGCAAGATTCTTTAACTTTGCGTATGGTCCACTCAATGGCAGCTTCAATTCTTCAAGGGACCATCATGGCCATGGAACCCACACTTTATCCACAGCTGGTGGCAACTTTGTCTCTGGAGCTAATGTTTTTGGCTACGGAAATGGAACTGCCAAAGGTGGCTCACCTCGAGCCCGTGTCGCGTCCTACAAGGTCTGTTGGGAAGCGGAAGGTGGAGGGTGTTTTGACGTGGATATCTTAGCTGCCTTCGAAGCTGCCATTGGTGATGGGGTTGATGTTATCTCAACTTCTCTAGGTGGAATTCCCACAGACTTCCTAAACGATGGGCTATCTATAGGAGCCTTTCATGCACTTCAGCATGGCATCGTTGTTGTTTGTTCGGCTGGGAACTCAGGACCAGCTCCTAGAACTGTATCAAACGTGTCACCATGGATGTTAACAGTTGGAGCTAGTACCATTGATAGGGAGTTCACAAATTTCGTAGTCCTTGGGAACAAGAAGAAACTTAAGGGTGCAAGCCTTTCTTCTAAGGCATTGAAAGTTGACAAGTTCTACCCTTTAATCAACGCTGTGGATGCAAAAGCCAACAATGTCTCCGAACTTGATGCGGAAATTTGTGAGGAGGGAACACTTGATTCCTCTAAATTAAATGGGAAGATTGTGGTTTGCCTTGTTGGGGTTAATGCAAGAATGGCCAAAGGTTATGTGGCTGCTCAGGCAGGTGCGGTTGGGATGATCCTGGTTAACAATCAACAAAGTGGGAATGAGATTAAAGCTGATCCACACATCATTCCAGCATCCCATGTAACCTATAATGACAGTATAACCATCTCCCAATATATTAGCTCTACAAGAACACCCATGGCTTACATCAGTTCAGTAACGGCAAAGCTCGGTGTCACGCCAGCCCCAACCGTGGCTAGGTTCTCAGGAAGAGGCCCAAGTATAATCGAGGAGTCAATCCTCAAGCCAGATATAACAGCACCAGGTGTGAATATAATTGCGGCTTACCCCGATGGAATACCATTGGCAAATCTGCCCGTTGATGATCGTCGAGGTCCTTTTATGGTATACTCTGGCACATCCATGTCTTGCCCCCATGTTTCTGGCATTGTAGGCCTTCTCAAAACCCTAAATCCCAAATGGAGTCCAGCAGCCATTAAATCAGCAATTATGACCACAGCCAAAACAAGAGACAGCAGCTTACATCCAATTGTCGACCTCGACGGAGTGATAGCAACTCCATTAGCATACGGCGCAGGACATGTTCATCCAAACAGCGCGATGGACCCTGGCCTCGTTTACGACATTACAATCGACGATTACCTAAATTTCTTGTGCTCTCGAGGCTACAATGCAACGCAAATGAAAAAATTCTCAAACAATACATTCGTTTGCAATAAATCATTCAAAGTGACTGACCTTAATTATCCATCCATCTCAGTCGCGGATTTGAAAACAGGCCCTGTGACGATCAATCGAAAGGTGAAGAACGTGGGAAGTCCAGGGAAGTATGTTGCTCGAGTAACGTCGCCTTTGGAAGTTTCAATCGTGGTTGAGCCGAGTACATTGCAATTTAGCGCCATGGATGAAGAGAAGAGCTTCAGGGTTGTGTTGCAGAGAAGTGGAAAGGGAAATCAACAAGGTTATGTGTTCGGAACATTGGAATGGTCAGATGGGAAACACAGTGTTAGAAGCCCCATTGCTATCAATTTGGGGAAATAG 2775 45.05 MQSTEASTSMEVETVSTETKNVVSTLPPKPQFDPLKPHEMNDGRIQFRKVSVPPHRYTPLKKAWMEIYTPIYEQMKIDIRMNLKARKVELKTRADTPDISNLQKCADFVHAFMLGFDVIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSLILGSPAGKVYSKLRAVTARLAESKEIAKEAIFYSYNRYINGFAAMLNEIQAADLARIPNVISIFESKERQLHTTRSWDFLGLETQKTVPSDSIWKVTRFGEDAIIANFDTGVWPESKSFSDEGYGPIPTRWMGSCQSGADPNFRCNRKLIGARFFNFAYGPLNGSFNSSRDHHGHGTHTLSTAGGNFVSGANVFGYGNGTAKGGSPRARVASYKVCWEAEGGGCFDVDILAAFEAAIGDGVDVISTSLGGIPTDFLNDGLSIGAFHALQHGIVVVCSAGNSGPAPRTVSNVSPWMLTVGASTIDREFTNFVVLGNKKKLKGASLSSKALKVDKFYPLINAVDAKANNVSELDAEICEEGTLDSSKLNGKIVVCLVGVNARMAKGYVAAQAGAVGMILVNNQQSGNEIKADPHIIPASHVTYNDSITISQYISSTRTPMAYISSVTAKLGVTPAPTVARFSGRGPSIIEESILKPDITAPGVNIIAAYPDGIPLANLPVDDRRGPFMVYSGTSMSCPHVSGIVGLLKTLNPKWSPAAIKSAIMTTAKTRDSSLHPIVDLDGVIATPLAYGAGHVHPNSAMDPGLVYDITIDDYLNFLCSRGYNATQMKKFSNNTFVCNKSFKVTDLNYPSISVADLKTGPVTINRKVKNVGSPGKYVARVTSPLEVSIVVEPSTLQFSAMDEEKSFRVVLQRSGKGNQQGYVFGTLEWSDGKHSVRSPIAINLGK 924
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 7032614 7038774 - CmoCh16G010180.1 Cmo16g01018 400053
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo16g01018 924 Pfam PA domain 554 623 IPR003137 -
Cmo16g01018 924 Gene3D Peptidase S8/S53 domain 302 792 IPR036852 GO:0004252|GO:0006508
Cmo16g01018 924 Pfam Peptidase inhibitor I9 220 272 IPR010259 -
Cmo16g01018 924 MobiDBLite consensus disorder prediction 1 38 - -
Cmo16g01018 924 ProSitePatterns Serine proteases, subtilase family, serine active site. 710 720 IPR023828 -
Cmo16g01018 924 CDD PA_subtilisin_like 511 641 - -
Cmo16g01018 924 Pfam Subtilase family 302 769 IPR000209 GO:0006508|GO:0008236
Cmo16g01018 924 ProSiteProfiles Serine proteases, subtilase domain profile. 276 779 - -
Cmo16g01018 924 SMART kh_6 129 202 IPR004087 GO:0003676
Cmo16g01018 924 PRINTS Subtilisin serine protease family (S8) signature 371 384 IPR015500 -
Cmo16g01018 924 PRINTS Subtilisin serine protease family (S8) signature 709 725 IPR015500 -
Cmo16g01018 924 PRINTS Subtilisin serine protease family (S8) signature 300 319 IPR015500 -
Cmo16g01018 924 MobiDBLite consensus disorder prediction 1 26 - -
Cmo16g01018 924 Gene3D K Homology domain, type 1 128 230 IPR036612 GO:0003723
Cmo16g01018 924 Gene3D - 796 922 - -
Cmo16g01018 924 Pfam Fibronectin type-III domain 824 920 IPR041469 -
Cmo16g01018 924 SUPERFAMILY Subtilisin-like 271 783 IPR036852 GO:0004252|GO:0006508
Cmo16g01018 924 CDD Peptidases_S8_3 270 745 IPR034197 -
Cmo16g01018 924 SUPERFAMILY PA domain 563 626 IPR046450 -
Cmo16g01018 924 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 218 923 IPR045051 -
Cmo16g01018 924 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 129 222 IPR036612 GO:0003723
Cmo16g01018 924 PANTHER SUBTILISIN-LIKE PROTEASE SBT5.4 218 923 - -
Cmo16g01018 924 Gene3D - 504 648 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo06g00705 Cmo-Chr6:3575305 Cmo16g01018 Cmo-Chr16:7032614 0 dispersed
Cmo06g00706 Cmo-Chr6:3578641 Cmo16g01018 Cmo-Chr16:7032614 3.30E-147 dispersed
Cmo06g00715 Cmo-Chr6:3644559 Cmo16g01018 Cmo-Chr16:7032614 0 dispersed
Cmo16g01018 Cmo-Chr16:7032614 Cmo16g01043 Cmo-Chr16:7274088 0 dispersed
Cmo16g01017 Cmo-Chr16:7020890 Cmo16g01018 Cmo-Chr16:7032614 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo16g01018 - - cmo:103491006 993.801