Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo16g01024 TCTTATATTGTTTATTTGGGATCACATTCTCATGGGTTGAATCCTTCTGCTATTGATCTTCAACTTACAACCCAAGCTCACTACAATTTTCTTGGATCTGTGTTAGGAAGCAATGAAGCAGCTAAGGAAGCAATCTTTTACTCATACAATAGACATATCAATGGTTTTGCAGCGGTTCTTGATCATAAAGTTGCAAAAGATGTAGCAAAACATCCAAGTGTGGTATCAATTCATGAAAACAAAGGAAGAGAACTGCATACAACAAATTCGTGGAGTTTTCTTGGAGTTGAGAATAATGGTGAACTTCCTCTAAACTCTCTTTGGAATCTTGCAAATTTTGGTGAATCTACAATCATTGGCAACCTTGACACAGTTTTTGAACATTCGACCGCTTTTGTAATAATTTGGATACCTCTTCTTCTCATAATTGGTACCAATACAGGCGTTTGGCCCGAATCAAAGAGCTTCAATGATGAAGGATATGGACCTATTCCAAAAAGATGGAAGGGAAATTGTGAAGGTGGCTCCAACTTTAGTTGCAACAGAAAGCTGATTGGGGCAAGGTATTTCAACAAAGGGTATGCATCCATCGTGGGGCCTCTCAACTCAAGCTACGCAACAGCAAGGGACGATCAAGGGCATGGAACACACACTTTATCCACGGCTGGAGGCCATTTTGTTTCAAGAGCAAACATATTTGGGAATGGTAATGGTACTGCAAAAGGGGGCTCTCCTAAAGCCCTTGTTGCCGCCTATAAAGTATGTTGGCCTCGTGTGAAAGTTGGTGGGTGCTTTGACTCTGACGTTCTGGCTGCCTTTGAAGCTGCCATTAGTGATGGAGTTGATGTTCTGTCTATTTCACTCGGTGGAAGTCCTCTAGAATTTCATGATGATCCAATAGCTATAGGATCTTTCCATGCAGTAAAGAACGGCATCACTGTCGTTTGTTCTGCTGGAAACTCAGGACCATCTCCAGGCAGTGTTGGAAATGTCGCACCATGGTTGATAACCGTGGGAGCTAGCACAACTGACAGGCTTTTTACCACTTACGTGGTGCTCGGAGATAAGAGACACATTAAGGGTGAAAGTATTTCTAATAAAATATTGCCAGTTCAGAAGTTTTATCCATTGATACGTGCTCTAGATGCAAAAAACAACAATGTCTCTGATATCGATGCCATATTATGTCTTGAAGGGTCTCTTGATCCTAAAAAGGTAGAAGAGAAAATTGTGGTTTGCCTAAGTGGGGACATTACAAATGTGGAAAAAGGTTATGTGGCTGCTCAAGCCGGTGCTGTTGGGATGATTCTTGCTAATGACAAGGAAGATGGGGATCGACTTGAGGTTGATGCACACTTACTTCCCGCTTCCAATATAAACTACATTGATGAATTAGGAGTCAAACCAGCACCAGTTATGGGTAGATTTTCATCAAGAGGTCCCAATATAATTGAGCCCTCAATACTCAAGCCTGATATAACTGCACCAGGTGTGAATATATTAGCTGCTTTTACGGAAGAAACATCACCAACTCATTCGTCTTTTGATAAACGGCGGGTTCCATTTAATATATTATCTGGCACTTCTATGTCATGCCCTCATATTTCTGGTATCGTTGGCCTTCTCAAAACCCTTTATCCAAAATGGAGTCCAGCGGTTATGAAATCTGCAATCATGACTACAGGTTCGGAAAGGAGAAAGCAAACTCATTTGCATATGGTGCAGGCCATGTCAATCCAAACAAAGCAGCAAATCCAGGCAGGCCTTGTTTACGACCTCTCCACCCAAGACTATTTGAACTTTCTATGTGCTCGAGGCTACAACAAAACACAAATGAAGCTATTTTCCAATGATACTTCATTTGTTTGTTCAAAGAAATTCAAAGTAACAGATTTGAACTACCCATCAATCACGATAGATAATCTAGTATCAGAGGTAGTGAAGATCAAAAGAAGAGTGAAGAATGTGGGATGTCCAGGCACATATGTTGCTAACGTCAAGGCACCACCAAGAGTTTCGGTTTCAGTAGAGCCAAATACTTTGAAGTTCACTAGAACCGGTGAAGAGAAGAGCTTCACAGTTGTGTTGAAGAGGGTTCCAAATGATTATCATCGAGGGGCTGTGTTTGGGAGACTTGCATGGTCTAATGGGAAGCACCATGTTAGGAGTCCGATTTTGGTGGTATTAGGATGA 2193 41.5 SYIVYLGSHSHGLNPSAIDLQLTTQAHYNFLGSVLGSNEAAKEAIFYSYNRHINGFAAVLDHKVAKDVAKHPSVVSIHENKGRELHTTNSWSFLGVENNGELPLNSLWNLANFGESTIIGNLDTVFEHSTAFVIIWIPLLLIIGTNTGVWPESKSFNDEGYGPIPKRWKGNCEGGSNFSCNRKLIGARYFNKGYASIVGPLNSSYATARDDQGHGTHTLSTAGGHFVSRANIFGNGNGTAKGGSPKALVAAYKVCWPRVKVGGCFDSDVLAAFEAAISDGVDVLSISLGGSPLEFHDDPIAIGSFHAVKNGITVVCSAGNSGPSPGSVGNVAPWLITVGASTTDRLFTTYVVLGDKRHIKGESISNKILPVQKFYPLIRALDAKNNNVSDIDAILCLEGSLDPKKVEEKIVVCLSGDITNVEKGYVAAQAGAVGMILANDKEDGDRLEVDAHLLPASNINYIDELGVKPAPVMGRFSSRGPNIIEPSILKPDITAPGVNILAAFTEETSPTHSSFDKRRVPFNILSGTSMSCPHISGIVGLLKTLYPKWSPAVMKSAIMTTGSERRKQTHLHMVQAMSIQTKQQIQAGLVYDLSTQDYLNFLCARGYNKTQMKLFSNDTSFVCSKKFKVTDLNYPSITIDNLVSEVVKIKRRVKNVGCPGTYVANVKAPPRVSVSVEPNTLKFTRTGEEKSFTVVLKRVPNDYHRGAVFGRLAWSNGKHHVRSPILVVLG 730
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 7102016 7105925 - CmoCh16G010240.1 Cmo16g01024 400059
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo16g01024 730 SUPERFAMILY PA domain 403 452 IPR046450 -
Cmo16g01024 730 ProSiteProfiles Serine proteases, subtilase domain profile. 90 597 - -
Cmo16g01024 730 SUPERFAMILY Subtilisin-like 86 564 IPR036852 GO:0004252|GO:0006508
Cmo16g01024 730 Gene3D - 344 463 - -
Cmo16g01024 730 CDD Peptidases_S8_3 84 561 IPR034197 -
Cmo16g01024 730 Gene3D Peptidase S8/S53 domain 146 343 IPR036852 GO:0004252|GO:0006508
Cmo16g01024 730 Gene3D Peptidase S8/S53 domain 467 598 IPR036852 GO:0004252|GO:0006508
Cmo16g01024 730 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 1 86 IPR037045 -
Cmo16g01024 730 Gene3D - 602 729 - -
Cmo16g01024 730 PANTHER SUBTILISIN-LIKE PROTEASE SBT5.4 1 132 - -
Cmo16g01024 730 Pfam PA domain 392 459 IPR003137 -
Cmo16g01024 730 Pfam Fibronectin type-III domain 631 727 IPR041469 -
Cmo16g01024 730 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 1 132 IPR045051 -
Cmo16g01024 730 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 142 464 IPR045051 -
Cmo16g01024 730 PANTHER SUBTILISIN-LIKE PROTEASE SBT5.4 465 730 - -
Cmo16g01024 730 PANTHER SUBTILISIN-LIKE PROTEASE SBT5.4 142 464 - -
Cmo16g01024 730 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 465 730 IPR045051 -
Cmo16g01024 730 CDD PA_subtilisin_like 350 463 - -
Cmo16g01024 730 Pfam Peptidase inhibitor I9 1 86 IPR010259 -
Cmo16g01024 730 PRINTS Subtilisin serine protease family (S8) signature 526 542 IPR015500 -
Cmo16g01024 730 PRINTS Subtilisin serine protease family (S8) signature 210 223 IPR015500 -
Cmo16g01024 730 ProSitePatterns Serine proteases, subtilase family, serine active site. 527 537 IPR023828 -
Cmo16g01024 730 Pfam Subtilase family 147 563 IPR000209 GO:0006508|GO:0008236
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo16g01024 Cmo-Chr16:7102016 Cmo16g01043 Cmo-Chr16:7274088 0 dispersed
Cmo16g01023 Cmo-Chr16:7091761 Cmo16g01024 Cmo-Chr16:7102016 0 tandem
Cmo16g01024 Cmo-Chr16:7102016 Cmo16g01025 Cmo-Chr16:7118362 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo16g01024 - - csv:105434448 1006.13