Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo16g01026 ATGAAGAGTCAAATGAAGCATAGGCCATTTAGTCTTACATTGTTTACTTGGGATCACATTCACACGGCTCGAATCCGTCATCAGCCGATCTCCGAGTTGCAACGGAATCTCATTATATATAGCAATGAGATGGCCAAGGAAGCAATCTTCTACTCCTACAACAGATATATCAATGGCTTTGCTGCCGTTCTTGACCACACAGTTGCACAAAATCTAGCAAGACATCCCGCTGTTGTATCGGTTCAGGAAAACAAGATGAGAAAGCTGCACACAACAAATTCATGGGAATTTCTTGAGCTAGAGAATGGTGGAGGAACTCCTCCAAATTCCATTTGGAATGTTTCAAATTTTGGCGTGTGGCCAGAATCAAAGAGTTTCAGTGATGAAGGATATGGGGCTATTCCCTCTAGGTGGAGGGGAAGTTGTGAGGGGGGCTCTAATTTTCATTGCAACAGGAAGCTAATTGGAGCACGGTATTTCAATAAAGGTGTTGTCGCCCTTGCAGGATCCCTTGATGTCAGCTTTGACACAGCAAGGGACCAAGAAGGGCACGGAACACACACTTTATCCACGGCCGGAGGCAGTTTCGTTTCGGGAGCTAACGTTTTTGGTTATGGTAATGGTACTGCAAAAGGGGGTTCGCCTAAAGCCCTTGTTGCTGCCTATAAAGTATGCTGGCGTACATTTCGTGGTGGTCAGTGTTCAGATGCTGACATCCTAGCTGCCATAGAAGCTGCTATTACTGATGGTGTTGATGTTCTCTCACTTTCACTCGGTCGAGGTCCTATGGAGTTTTTCAACGACGTAGCAGCGATCGGAGCCTTCCATGCAGTTCAACAAGGGATCGTTGTCGTTTGCTCGGGTGGAAACTCAGGACCCGATCCACAGAGCATAGAAAATGTGGCACCTTGGCTTTTCACTGTGGCTGCTAGCACAATCAACAGACAATTTACTAGTTATGTGGCCCTTGGAAACGAGAAGAATATCACGGGGTCTCTTGATCCGAGAAAGGTGAAAGGGAAGATTATAGTTTGCGTTAGAGGGGACGATGCAAGAGTGGACAAGGGTTTTGTGGCTGCTAAAGCAGGTGCTGTTGGGATGATTCTAGCCAACAACGAGAAATATGGGAATGATGTTGTAGCCGATGCACACATCCTTCCTGCCTCCCACATAAGTTATATCGATGGCGAAACCGTCTACAAATACATCAACTCCACCAAAACTCCAGTGGCTTACATGACTCATGTAAGAACAGAGACAGGAATCAAACCTGCACTTGTTATGGCTTCATTCTCATCTAGAGGTCCCAGTTCAATCGAGGAGTTGATACTTAAGCCTGATATAACAGCACCGGGCATCAATATAATTGCAGCCTATTCAGAAGATGCATCGCCAAGTGGTTCACCATTTGATAACCGTCGAATTCCATTTAATGTAGTATCTGGCACTTCCATGTCATGTCCGCATATTGCTGGTATTGTTGCCCTTCTCAAGACCATTTATCCAAAATGGAGTCCAGCAGCTATCAAATCTGCAATCATGACCACAGGTACATTCAAATTATTAAATCTCAAATTATTAAATCATTATGTAAATAGTTGGGCTAAGATATAA 1614 44.55 MKSQMKHRPFSLTLFTWDHIHTARIRHQPISELQRNLIIYSNEMAKEAIFYSYNRYINGFAAVLDHTVAQNLARHPAVVSVQENKMRKLHTTNSWEFLELENGGGTPPNSIWNVSNFGVWPESKSFSDEGYGAIPSRWRGSCEGGSNFHCNRKLIGARYFNKGVVALAGSLDVSFDTARDQEGHGTHTLSTAGGSFVSGANVFGYGNGTAKGGSPKALVAAYKVCWRTFRGGQCSDADILAAIEAAITDGVDVLSLSLGRGPMEFFNDVAAIGAFHAVQQGIVVVCSGGNSGPDPQSIENVAPWLFTVAASTINRQFTSYVALGNEKNITGSLDPRKVKGKIIVCVRGDDARVDKGFVAAKAGAVGMILANNEKYGNDVVADAHILPASHISYIDGETVYKYINSTKTPVAYMTHVRTETGIKPALVMASFSSRGPSSIEELILKPDITAPGINIIAAYSEDASPSGSPFDNRRIPFNVVSGTSMSCPHIAGIVALLKTIYPKWSPAAIKSAIMTTGTFKLLNLKLLNHYVNSWAKI 537
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 7127309 7130772 - CmoCh16G010260.1 Cmo16g01026 400061
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo16g01026 537 ProSiteProfiles Serine proteases, subtilase domain profile. 128 537 - -
Cmo16g01026 537 PANTHER SUBTILISIN-LIKE PROTEASE SBT5.4 330 520 - -
Cmo16g01026 537 Pfam Peptidase inhibitor I9 31 90 IPR010259 -
Cmo16g01026 537 PRINTS Subtilisin serine protease family (S8) signature 481 497 IPR015500 -
Cmo16g01026 537 PRINTS Subtilisin serine protease family (S8) signature 180 193 IPR015500 -
Cmo16g01026 537 CDD PA_subtilisin_like 331 411 - -
Cmo16g01026 537 Pfam PA domain 331 397 IPR003137 -
Cmo16g01026 537 SUPERFAMILY PA domain 330 409 IPR046450 -
Cmo16g01026 537 Gene3D - 314 330 - -
Cmo16g01026 537 Gene3D - 331 420 - -
Cmo16g01026 537 CDD Peptidases_S8_3 88 516 IPR034197 -
Cmo16g01026 537 PANTHER SUBTILISIN-LIKE PROTEASE SBT5.4 38 330 - -
Cmo16g01026 537 SUPERFAMILY Subtilisin-like 105 518 IPR036852 GO:0004252|GO:0006508
Cmo16g01026 537 Pfam Subtilase family 176 517 IPR000209 GO:0006508|GO:0008236
Cmo16g01026 537 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 330 520 IPR045051 -
Cmo16g01026 537 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 38 330 IPR045051 -
Cmo16g01026 537 ProSitePatterns Serine proteases, subtilase family, serine active site. 482 492 IPR023828 -
Cmo16g01026 537 Gene3D Peptidase S8/S53 domain 118 313 IPR036852 GO:0004252|GO:0006508
Cmo16g01026 537 Gene3D Peptidase S8/S53 domain 421 518 IPR036852 GO:0004252|GO:0006508
Cmo16g01026 537 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 7 90 IPR037045 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo16g01026 Cmo-Chr16:7127309 Cmo16g01045 Cmo-Chr16:7296692 0 dispersed
Cmo16g01025 Cmo-Chr16:7118362 Cmo16g01026 Cmo-Chr16:7127309 0 tandem
Cmo16g01026 Cmo-Chr16:7127309 Cmo16g01027 Cmo-Chr16:7156450 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo16g01026 - - bhj:120090550 731.865