Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo16g01027 ATGAAGAGTCAAATGAGGCATAGGCCATTTAGGTTTGATCACATTCGCACGGCTCGAATCCGTCTTCGGTTGATCTCCGAATCGCAACGGAATCTCATTACATATAGCAATGAGATAGCCAAGGAAGCAATTTTCTACTCTTACCATAGACATATCAATGGCTTTGCTGCTGTTCTTGACCACAAAGTTGCACAAGATCTAACAAGACATCCCGCTGTGGTATCGGTTCATGAGAACAAGATGAGAAAGCTGCACACAACAAGTTCATGGGAATTTCTTGATCTAGAGAATGGCGAAGGAACTCCACCAAATTCCATTTGGAATGAATCAAAGAGTTTCAATGACGAAGGATATGGAGCTATTCCCTCGAGGTGGAGGGGAAGTTGTGAGGGTGGCTCTAATTTTCATTGCAACAGGAAGTTAATTGGAGCACGGTACTTCAATAAAGGTTACACCGCCCTTGCGGGATCCCTTGATGACAGCTTTGACACAGCAAGGGACCATGATGGGCATGGAACACACACTTTATCCACGGCAGGAGGCAATTTTGTTTCGGGAGCTAACGTTTTTGGAAATGGTAATGGCACTGCAAAAGGGGGTTCACCTAAAGCCTTTGTTGCTGCCTATAAAGTATGCTGGCCTACATTTCATGGTGGTCAGTGTTCGGATGCAGACATCCTAGCTGCCATAGAAGCTGCTATTACTGATGGTGTTGACGTTCTTTCACTTTCACTTGGTCGAGGTTCCACGGAGTTTTTCGACGATGTAACGGCGATTGGATCCTTCCATGCAGTTCAACAAGGGATCGTTGTCGTTTGCTCGGGTGGAAACTCAGGACCCGATCCACAGAGCGTAGAAAATGTGGCGCCTTGGCTTTTCACTGTGGCTGCTAGCACAATCACCAGACAATTTACTAGTTATGTGGCCCTTGGAAACAAGAAGCATATCACGGTACTCAATTTAGTCCTCTATTTTCTCGTTAAACTGTGTGTGGAGGGGTCTCTTGATCCGAGAAAGGTGAAAGGGAAGATTATAGTTTGCGTTAAAGGAGGGGATAGTGCAAGAGTGGACAAGGGTTACGTGGCTGCTCAAGCAGGTGCTGTTGGGATGATTCTAGCCAACAGCGAGGAAGATGGGAATGAACTTATAGCCGATGCACACCTACTTCCTGTCTCCCACATAAGCTATATCGATGGCGAAATAGTCTATGAATACATCAACTCCACCAAAACTCCGGTGGCTTACATGACCCAAGTAAGGACAGAGACGGGAATCAAACCGGCACCCGTTATGGCTTCATTCTCATCTAGAGGTCCCAATTCAATCGAGGAGTCAATACTCAAGCCTGATATAACAGCACCTGGCGTCAATATAATTGCAGCCTATTCAGAAGATGCATCACCAAGTGGTTCACCATTTGATAACCGTCGAATTCCATTTAATGTAGTATCTGGCACTTCCATGTCATGTCCCCATATTTCTGGTATTGTTGCCCTTCTCAAGACCATTTATCCAAAATGGAGTCCTGCAGCTATCAAATCTGCAATCATGACCACAGGTACATTCAAATTATCAAATCGTTACCGTAACCAATTACAATTCCACCGTGATTCGAGAGGTTCTTTGTGCTCATTCCATTGTAATAACATTTCCTTCGCTTGTTCAGCTGAAACTAGAGCCAATGACTTACATCCAATACTAGATTCCACCAAGCTTGTAGCCAACCCATTGGCGTACGGTGCGGGACATGTCCATCCCAACCGAGCAGCAAATCCTGGGCTTGTATACGACCTTACCACCAATGACTATCTAAATTTCTTATGTGCTCGTGGCTACAACAAAACACAACTTAGTAAATTCTCCAATACGTCATTCGTTTGTTCAAAGTCATTCAAACTAACAGATTTTAACTACCCATCAATCTCGATACCCAAAATGAAATCAGAACCTGTGACAATCAAAAGAACAGTTAAGAATGTGGGAAGCCCAAGCACGTACGTAGCTCGGGTGAAGGTACCTCCAGGAGTTTTAGTTTCAGTTGAGCCAAGTACGTTGAAGTTTACTCGAACCGATGAAGAGAAGACTTTCAAAGTTGTATTCCGAAGTGTGACAAACACCAAGCATCGAGGCTATGTATTTGGGTCTTTGAAATGGTTAGATGGTAAGCATCATGTAAGAAGCTCAATTGTAGTGAATTTGGGATGA 2205 44.17 MKSQMRHRPFRFDHIRTARIRLRLISESQRNLITYSNEIAKEAIFYSYHRHINGFAAVLDHKVAQDLTRHPAVVSVHENKMRKLHTTSSWEFLDLENGEGTPPNSIWNESKSFNDEGYGAIPSRWRGSCEGGSNFHCNRKLIGARYFNKGYTALAGSLDDSFDTARDHDGHGTHTLSTAGGNFVSGANVFGNGNGTAKGGSPKAFVAAYKVCWPTFHGGQCSDADILAAIEAAITDGVDVLSLSLGRGSTEFFDDVTAIGSFHAVQQGIVVVCSGGNSGPDPQSVENVAPWLFTVAASTITRQFTSYVALGNKKHITVLNLVLYFLVKLCVEGSLDPRKVKGKIIVCVKGGDSARVDKGYVAAQAGAVGMILANSEEDGNELIADAHLLPVSHISYIDGEIVYEYINSTKTPVAYMTQVRTETGIKPAPVMASFSSRGPNSIEESILKPDITAPGVNIIAAYSEDASPSGSPFDNRRIPFNVVSGTSMSCPHISGIVALLKTIYPKWSPAAIKSAIMTTGTFKLSNRYRNQLQFHRDSRGSLCSFHCNNISFACSAETRANDLHPILDSTKLVANPLAYGAGHVHPNRAANPGLVYDLTTNDYLNFLCARGYNKTQLSKFSNTSFVCSKSFKLTDFNYPSISIPKMKSEPVTIKRTVKNVGSPSTYVARVKVPPGVLVSVEPSTLKFTRTDEEKTFKVVFRSVTNTKHRGYVFGSLKWLDGKHHVRSSIVVNLG 734
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 7156450 7160522 - CmoCh16G010270.1 Cmo16g01027 400062
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo16g01027 734 Pfam Subtilase family 160 520 IPR000209 GO:0006508|GO:0008236
Cmo16g01027 734 Gene3D - 301 423 - -
Cmo16g01027 734 Gene3D - 607 733 - -
Cmo16g01027 734 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 323 522 IPR045051 -
Cmo16g01027 734 SUPERFAMILY Subtilisin-like 133 594 IPR036852 GO:0004252|GO:0006508
Cmo16g01027 734 SUPERFAMILY PA domain 337 430 IPR046450 -
Cmo16g01027 734 CDD PA_subtilisin_like 307 414 - -
Cmo16g01027 734 CDD Peptidases_S8_3 83 519 IPR034197 -
Cmo16g01027 734 Pfam Peptidase inhibitor I9 31 85 IPR010259 -
Cmo16g01027 734 ProSitePatterns Serine proteases, subtilase family, serine active site. 485 495 IPR023828 -
Cmo16g01027 734 Gene3D Peptidase S8/S53 domain 106 603 IPR036852 GO:0004252|GO:0006508
Cmo16g01027 734 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 33 317 IPR045051 -
Cmo16g01027 734 Pfam Fibronectin type-III domain 635 731 IPR041469 -
Cmo16g01027 734 PANTHER SUBTILISIN-LIKE PROTEASE SBT5.4 554 734 - -
Cmo16g01027 734 PANTHER SUBTILISIN-LIKE PROTEASE SBT5.4 33 317 - -
Cmo16g01027 734 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 554 734 IPR045051 -
Cmo16g01027 734 PRINTS Subtilisin serine protease family (S8) signature 167 180 IPR015500 -
Cmo16g01027 734 PRINTS Subtilisin serine protease family (S8) signature 484 500 IPR015500 -
Cmo16g01027 734 PANTHER SUBTILISIN-LIKE PROTEASE SBT5.4 323 522 - -
Cmo16g01027 734 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 15 85 IPR037045 -
Cmo16g01027 734 ProSiteProfiles Serine proteases, subtilase domain profile. 1 542 - -
Cmo16g01027 734 Pfam PA domain 336 400 IPR003137 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo16g01027 Cmo-Chr16:7156450 Cmo16g01043 Cmo-Chr16:7274088 0 dispersed
Cmo16g01026 Cmo-Chr16:7127309 Cmo16g01027 Cmo-Chr16:7156450 0 tandem
Cmo16g01027 Cmo-Chr16:7156450 Cmo16g01028 Cmo-Chr16:7163748 0 tandem
Cmo16g01027 Cmo-Chr16:7156450 Cmo06g00715 Cmo-Chr6:3644559 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo16g01027 - - bhj:120090550 1032.71