Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo16g01044 ATGGAGGCCTTCAATCTTCCTCCTTTACTTGTGTCCTTCTTTCTTTTGGTTCTTTTGCAAACATCCACCATTGCAGCCAAGAAGTCTTATATTGTTTACTTGGGATCACATTCACATGGATTGAATCCTTCCGCAATTGATCTTCAACTTGCAACACAAACCCACTACAATCTACTTGGATCCGTGTTAGGAAGCAACGAAGCAGCTAAGGAAGCAATCTTTTACTCATACAATAGACATATCAATGCTTTTGCAGCTATTCTGGATCAGAAAGTTGCGGAAGATATAGCAAAGCGTCCAGATGTAGTATCAGTATATGAAAACAAAGGGCTAGAACTGCACACAACAAGATCATGGAACTTTCTTGGAGTTGAGAATGATGGTGGAATTCCTTCAAACTCGCTTTGGAACCTTTCAAAATTTGGTGAATCTACCATCATTGGCAACCTTGACTCTGGTGTTTGGCCAGAATCGAAGAGTTTTAGTGATGAAGGATATGGACCTATCCCAACAAGATGGAAGGGAAGTTGTGAAGGTGGCTCTAACTTTAGTTGCAACAGGAAGTTGATTGGAGCACGATATTTCAACAAAGGCTATGCATCTAACGGGGGACATCTCAACTCAAGCTATGAAACGGCAAGGGACGATGATGGGCATGGAACACACACCTTATCCACAGCTGGAGGCAATTTCGTTCAAAGAGTAAGCATGTTTGGAAATGGTTATGGCACTGCAAAAGGGGGTTCCCCTAAAGCTCTTGTTGCTGCCTATAAAGTATGTTGGCCTGCGGTGGCAAGTGGTGGATGTTTTATGGCTGATATCCTAGCTGGCTTTGAAGCTGCCATTAGTGATGGAGTTGACGTTCTATCGATTTCACTCGGTGGAGGTGCTAGAGAATTTTCTGAAGACATACTAGCTATAATGTCCTTCCATGCAGTGAAGAACGGCATCACTGTTGTTTGTTCTGCTGGAAATTTTGGACCACTTGAAGGCACAGCCTCAAATGTTGCACCATGGATGATAACTGTGGGAGCTAGCACAGTTGACAGGCATTTTACCACTAACGTGGTGTTGGGAGACAAAAGGCACTTCAAGGGTAAAAGTCTTTCTAGTAAATTATTGCCAGCTAAGAAGCTCTATCCGTTGATCCGTGCTTTAGATGCAAAATCCAATAATGTCTCTGACAATGACGCCATATTATGTCACCAAGGGTCTCTTAATCCTGAAAAGGCAAAAGGAAAAATTGTAGTTTGTCTTAGAGGGGACAATACAAGAGTGGAGAAAGGTTACGTGGTTGCTCAAGCAGGTGGTATTGGGATGATTCTTGCTAATGACAAGGGAAGTGGGGATGCACTTTCGCTTGATGCACACTTACTTCCTGCTGCACACATAAGCTATACCGACGGTGAATCAATCTACCAATACATCCAATCTACTAAAAGTCCAATGGCTTATATGACTCACGTGACTGAGTTGGGAATCAAACCAGCACCAATTATGGCTCCATTTTCGTCGAGAGGTCCCAACACAGTTGAGCCCTTAATACTCAAGCCTGATATAACAGCACCAGGGGTGAATATAATAGCGGCTTTCTCTGAAGCAACATCCATAACTGGTTTACCTTATGATAAGCGTCGGGTTCAATTCACTGAATTATCTGGCACTTCCATGTCATGCCCCCATATTTCTGGCATCGTTGGCCTTCTCAAAACGCTCTATCCAAAATGGAGTCCAGCAGCTATCAGATCTGCCATCATGACCACAGCGGTTACCGAAGCCAATGACTTAAATCCAATACTAAGCTTAGAAAAGGAGAAAGCAAACCCATTGGCATATGGTGCAGGTCATGTCCAACCAAACAAAGCAGCAAATCCAGGCCTTGTTTACGACCTCTCCACCCAAGACTACTTGAACTTCTTATGTGCTCGTGGCTACAATAAAAAACAAATGAAACTATTCTCCAATGATACTTCATTTGTTTGTTCAAAGTCATTCAAAGTAATAGACTTGAACTATCCATCAATCTCGATGTATAATCTAAAATCAGAGGTAGTGAAGATCAAAAGAAGAGTGAAGAATGTAGGAAGTCCAGGCACCTATGTTGCTAAAGTCGAGGCACCGCCGGGAGTTTTGGTTTCGGTAGACCCAAGTACTTTGAAGTTCACTAAAACTGCCGAAGAGAAGGATTTTCAAGTTGTGTTGAGGAGGATTCAAAGTAATCAAACTGAAAAGCATGTGTTCGGAAAACTTGTGTGGTCTGATAGGAAACATCGTGTGAGTAGTCCAATTTTTGTGACATTAGAGATTTAG 2310 42.42 MEAFNLPPLLVSFFLLVLLQTSTIAAKKSYIVYLGSHSHGLNPSAIDLQLATQTHYNLLGSVLGSNEAAKEAIFYSYNRHINAFAAILDQKVAEDIAKRPDVVSVYENKGLELHTTRSWNFLGVENDGGIPSNSLWNLSKFGESTIIGNLDSGVWPESKSFSDEGYGPIPTRWKGSCEGGSNFSCNRKLIGARYFNKGYASNGGHLNSSYETARDDDGHGTHTLSTAGGNFVQRVSMFGNGYGTAKGGSPKALVAAYKVCWPAVASGGCFMADILAGFEAAISDGVDVLSISLGGGAREFSEDILAIMSFHAVKNGITVVCSAGNFGPLEGTASNVAPWMITVGASTVDRHFTTNVVLGDKRHFKGKSLSSKLLPAKKLYPLIRALDAKSNNVSDNDAILCHQGSLNPEKAKGKIVVCLRGDNTRVEKGYVVAQAGGIGMILANDKGSGDALSLDAHLLPAAHISYTDGESIYQYIQSTKSPMAYMTHVTELGIKPAPIMAPFSSRGPNTVEPLILKPDITAPGVNIIAAFSEATSITGLPYDKRRVQFTELSGTSMSCPHISGIVGLLKTLYPKWSPAAIRSAIMTTAVTEANDLNPILSLEKEKANPLAYGAGHVQPNKAANPGLVYDLSTQDYLNFLCARGYNKKQMKLFSNDTSFVCSKSFKVIDLNYPSISMYNLKSEVVKIKRRVKNVGSPGTYVAKVEAPPGVLVSVDPSTLKFTKTAEEKDFQVVLRRIQSNQTEKHVFGKLVWSDRKHRVSSPIFVTLEI 769
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 7285562 7290124 + CmoCh16G010440.1 Cmo16g01044 400079
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo16g01044 769 Pfam Peptidase inhibitor I9 29 114 IPR010259 -
Cmo16g01044 769 PANTHER SUBTILISIN-LIKE PROTEASE SBT5.4 28 767 - -
Cmo16g01044 769 CDD PA_subtilisin_like 355 484 - -
Cmo16g01044 769 SUPERFAMILY Subtilisin-like 113 627 IPR036852 GO:0004252|GO:0006508
Cmo16g01044 769 SUPERFAMILY PA domain 403 479 IPR046450 -
Cmo16g01044 769 Gene3D - 349 493 - -
Cmo16g01044 769 Pfam Subtilase family 143 597 IPR000209 GO:0006508|GO:0008236
Cmo16g01044 769 Pfam Fibronectin type-III domain 669 765 IPR041469 -
Cmo16g01044 769 ProSitePatterns Serine proteases, subtilase family, serine active site. 554 564 IPR023828 -
Cmo16g01044 769 Gene3D Peptidase S8/S53 domain 145 636 IPR036852 GO:0004252|GO:0006508
Cmo16g01044 769 Pfam PA domain 401 472 IPR003137 -
Cmo16g01044 769 CDD Peptidases_S8_3 111 590 IPR034197 -
Cmo16g01044 769 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 28 767 IPR045051 -
Cmo16g01044 769 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 18 114 IPR037045 -
Cmo16g01044 769 ProSiteProfiles Serine proteases, subtilase domain profile. 118 623 - -
Cmo16g01044 769 Gene3D - 640 767 - -
Cmo16g01044 769 PRINTS Subtilisin serine protease family (S8) signature 215 228 IPR015500 -
Cmo16g01044 769 PRINTS Subtilisin serine protease family (S8) signature 142 161 IPR015500 -
Cmo16g01044 769 PRINTS Subtilisin serine protease family (S8) signature 553 569 IPR015500 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo16g01043 Cmo-Chr16:7274088 Cmo16g01044 Cmo-Chr16:7285562 0 tandem
Cmo16g01044 Cmo-Chr16:7285562 Cmo16g01045 Cmo-Chr16:7296692 5.14E-154 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo16g01044 - - bhj:120090550 1107.82