Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo16g01056 ATGTGGCTTCTTTTGATTGGAGCTATTGTTGTTGTAAGTTTTACACACTGGCTTTATAGATGGAGAAATCCCAAATGTAATGGAAAACTTCCACCAGGTTCAATGGGTTTTCCTCTACTTGGTGAAACCCTGCAGTTCTTTGCTCCCAATACCTCCTCTGATATTCCTCCTTTCGTCAGAAACAGAATGGATAGGTATGGACCGATATTCCGAACGAGTTTGGTGGGAAGACCGTTGATTGTCTCTACAGACCCTGACTTGAATTACTATATCTTTCAAGAAGAGGGACAATTGTTCCAGAGCTGGTATCCTGATACCTTCACAGAGATATTTGGAAGGCAAAATGTTGGTTCGCTGCACGGTTTCATGTATAAATATCTTAAGAACATGGTTCTTCATCTTTTTGGCCCTGAAAGTCTGAGAAAGATGATACCTGAAGTTGAGGCTGTAGCAACTCAAAGATTGAGACAATGGTCATCTCAAAACTCAGTTGAATTGAAGGATAATACTGCAAGTATGATTTTTCATCTGACTGCAAAGAAGCTGATTAGTTATGATTCAGAAAATTCTTCGGAGAATTTGAGAGAGAACTTTGTTGCGTTCATACAGGGCTTGATCTCCTTCCCTCTAAATGTTCCCGGAACTGCTTATAACAAATGCTTACAGGGCCGGAAAAGAGCGATGAGGATGCTGAAGAACATGTTACAAGAAAGGCGAGCAAATCCAAGGAAACAACAAATAGATTTTTTTGATTTTGTTCTTGAAGAACTGGAGAAAGATGGAACGCTTCTCACTGAGGAAATTGCTTTGGACCTTATGTTTGTACTACTTTTTGCAAGCTTTGAAACTACTTCACTTGCTATTACAGCAGCCATCAAATTTCTCCTCAACAATCCTCATGTGCTCGAGGAGCTGACGGCTGAACATGAGGGAATATTGAGGAGAAGGGAAAATGCACATTCTGGGCTTACTTGGGAGGAATACAAATCCATGACATTCACATTTCAGTTTATCAACGAAACGGCGAGACTGGCAAATATAGTTCCAGGAATCTTTCGAAAAGCACTTAGAGATATCCAGTTTAAGGGATATACCATTCCAGCAGGCTGGGCTGTTATGGTCTGCCCTCCAGCTGTGCACTTAAACCCGGAAAAGTACATCGATCCCCTTGCTTTTAACCCGTGGCGATGGGAGAAATCTGAACTGAAGGGAGCTTCTAAACATTTCATGGCTTTTGGTGGGGGCATGAGGTTCTGTGTTGGTACAGATTTTACCAAAGTTCAAATGGCTGTGTTTCTCCATTGTCTGGTTACAAAGTACAGGTTCAAAGCAATCAAAGGAGGCAACATCGTCCGAACTCCCGGTTTACAGTTCCCAGACGGCTTTGACGTTCAGATCATGGAGAAATAA 1410 41.77 MWLLLIGAIVVVSFTHWLYRWRNPKCNGKLPPGSMGFPLLGETLQFFAPNTSSDIPPFVRNRMDRYGPIFRTSLVGRPLIVSTDPDLNYYIFQEEGQLFQSWYPDTFTEIFGRQNVGSLHGFMYKYLKNMVLHLFGPESLRKMIPEVEAVATQRLRQWSSQNSVELKDNTASMIFHLTAKKLISYDSENSSENLRENFVAFIQGLISFPLNVPGTAYNKCLQGRKRAMRMLKNMLQERRANPRKQQIDFFDFVLEELEKDGTLLTEEIALDLMFVLLFASFETTSLAITAAIKFLLNNPHVLEELTAEHEGILRRRENAHSGLTWEEYKSMTFTFQFINETARLANIVPGIFRKALRDIQFKGYTIPAGWAVMVCPPAVHLNPEKYIDPLAFNPWRWEKSELKGASKHFMAFGGGMRFCVGTDFTKVQMAVFLHCLVTKYRFKAIKGGNIVRTPGLQFPDGFDVQIMEK 469
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 7421563 7425709 + CmoCh16G010560.1 Cmo16g01056 400091
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo16g01056 469 Gene3D Cytochrome P450 22 468 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo16g01056 469 PANTHER CYTOCHROME P450, FAMILY 87, SUBFAMILY A, POLYPEPTIDE 2 8 466 - -
Cmo16g01056 469 Pfam Cytochrome P450 31 451 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo16g01056 469 PANTHER CYTOCHROME P450 26 8 466 - -
Cmo16g01056 469 PRINTS E-class P450 group I signature 419 442 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo16g01056 469 PRINTS E-class P450 group I signature 335 353 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo16g01056 469 PRINTS E-class P450 group I signature 63 82 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo16g01056 469 PRINTS E-class P450 group I signature 268 285 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo16g01056 469 PRINTS E-class P450 group I signature 375 399 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo16g01056 469 PRINTS E-class P450 group I signature 288 314 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo16g01056 469 PRINTS E-class P450 group I signature 409 419 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo16g01056 469 SUPERFAMILY Cytochrome P450 27 453 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo16g01056 469 PRINTS P450 superfamily signature 336 347 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo16g01056 469 PRINTS P450 superfamily signature 279 296 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo16g01056 469 PRINTS P450 superfamily signature 419 430 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo16g01056 469 PRINTS P450 superfamily signature 410 419 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo16g01056 469 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 412 421 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo06g00738 Cmo-Chr6:3817738 Cmo16g01056 Cmo-Chr16:7421563 0 dispersed
Cmo15g00235 Cmo-Chr15:1161724 Cmo16g01056 Cmo-Chr16:7421563 8.12E-96 dispersed
Cmo16g01056 Cmo-Chr16:7421563 Cmo17g00705 Cmo-Chr17:7126644 5.66E-83 dispersed
Cmo08g00035 Cmo-Chr8:183408 Cmo16g01056 Cmo-Chr16:7421563 1.20E-156 transposed
Cmo14g01087 Cmo-Chr14:6166390 Cmo16g01056 Cmo-Chr16:7421563 0 transposed
Cmo16g01056 Cmo-Chr16:7421563 Cmo06g00736 Cmo-Chr6:3799712 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo16g01056 - - csv:101209473 896.73