Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo16g01120 ATGGGAAGCGGAGTCTCCAGCCTCTTCTCGTGCCTTAAGCCGGAGACTCGACCCGCCGCCCTTCCAGCCGACAATTCCGACCTCCTCTTCTCTGCCTCCGAGCCTCTCGATGAAACCCTAGGCCATTCCTTCTGTTACGTCCGCTCTTCCAACCGCTTCCTCTCTCCTTCTCATTCCGATCGCTTTCTTTCCCCTTCTCAGTCGCTTCGTTTTTCGCCTCCTCACGAACCGCTGCCTCTCGGGACTAGGACTAGAACTGGCCTGCCGGAGACTGCCTTCAAGGCCATCTCCGGTGCTTCTGTCAGTGCTAATAGTTCTATTCCCAGATCTGTTTTTATGGTCGATAGTGTTTACGACGATGCCACTGACACTGCGCTTGGGGCTTGTGGTAGTGGGTGTGGAGTGAGAGGGAGTATTTTGAATGGCTTTGAGAGTACATCTTCTTTTACTGCTCTTCCGCTTCAGCCGGTGCCGAGAGGTGGGACCGAACCTTTGGAGCGAGGTGGGTTCTTTCTCTCTGGTCCAATTGAGCGTGGGGCACTGTCTGGTCCTCTCGATGCGAATGTTGATGGTGGTGGTGGTGGAGGCGCCGGTGGTGGCGGTGGTGGCAGTGGCGGTGCTGGGAGAGTTCATTTCTCCGCTCCGCTGGGTGGGATGTACGTGAAGAAGAAGAGGAAGAAGAGCATTTCGGGGTTTAGGAAGGCGTTTACGAGGAATTTTTCAGATAAGCGGCCGTGGGTTGTGCCGGTGTTGAATTTCGTTGGCCGAAAGGATAGCTCGACGGCGGGAGATGAGCCGGAGTTGAGGAATGAGAGTGATGTTCAATGGGCGCTTGGGAAGGCTGGGGAGGATCGGGTACATGTGGTTGTATCAGAAGAGCAAGGGTGGTTGTTTGTGGGGATTTACGATGGATTCAATGGCCCTGATGCGCCTGAATTCTTGATGGGTAATCTCTACAGAGCTGTCTTCAATGAGCTTCAGGGATTGTTTTGGGAAATTGATGATAATGAGGAGGCTGCTAATTCCAACCCTTCAAACATTGCTGAAGAGAGTACAGTCAGTGTGAATGAAACTAATGCTGACCCGTCTTCCAGAGCCTCTAGTCAAAGGATTGAAACTAATGGAAATGAAGCGGAAGTGGAACCACCGGCTACTGATAGAGGATCGGTCAAGAGGGTTACATTTCAATCCGAGGTTGGATCGGAGAACAGGCGGAGGCGGCGGTTATGGGAGTATTTAGCAGAGGACGATACACAGGATGGACTTGATCTTTCGGGGTCGGAGAGATTTGCATTTTCAGTCGACGATGCGCTTAGTGTAAATAGTGCAGGTTCAGTAGCTGGTAGAAGGTGGCTGTTATTGTCCAAGTTAAAACAAGGGTTGTCAAAGCATAAGGAGGGTAATGTTAAGACTTTGTTCCCATGGAAGTATGGTTTGGGAGATAAGGAGAAGGCTGAGGCTGAGAATAGGGTGGAAGAGACATCTTATCGAAGTGGTAAGAGGAGAAAGGAAGGTTTAATTGATCATGAGTTGGTGTTGGGGGCACTGTCACGAGCTCTTGAGATAACTGAATTAGCATACTTGGATATGACAGATAAGTTGCTTGATACCAATCCAGAGCTTGCTTTGATGGGTTCTTGCTTACTGGTTGTGTTAATGAGGGATGAAGATGTGTATGTAATGAATTTGGGTGATAGCCGTGCCATTGTTGCACAGTATGAGCAACAAAAAGTTGGCCCCAGTGAAGACATGAAGGAGGAGGGCGACAAAGGGACGGGCATGGAGGGTATAATTGAGGAGTCTACAACGAGCGAAGGGAAAATAACTCGAACGAATCAACCTTCGGCTCAGACCACGAGATTGACTGCATTGCAGCTATCCACCGATCATAGCACGAGCATTGAAGAAGAAGTAAGAAGAATAAAGAATGAGCACCCTGATGACAAACGGTGCATTGTCAACGATAGAGTGAAGGGTCGTCTAAAGGTTACAAGGGCGTTTGGTGCAGGATTTTTGAAACAGCCAAAATTAAATGATGTCTTACTGGAAATGTTTCGGAACGAGTATATTGGTACGGCGCCATATTTATCATGCTTACCTTCTCTTCGTCACCATAAACTCTGCCCCACTGATCAATTCATCGTGCTTTCATCTGATGGGCTATATCAATATCTAACCAATGAAGAAGTAGTTTCCTATGTTGAGAACTTCATGGAGAAGTTTCCAGATGGAGACCCTGCACAGCACTTGATAGAGGAGCTTCTTTGCCGTGCAGCCAGAAAAGCAGGAATGGACTTTCATGAATTGTTGGACATCCCACAAGGGGATCGGAGAAAGTATCATGATGATGTTACTGTTATGGTCATTTCACTTGAAGGAAGAATCTGGAAATCCTCAGGAAAATATCTTTGA 2412 48.34 MGSGVSSLFSCLKPETRPAALPADNSDLLFSASEPLDETLGHSFCYVRSSNRFLSPSHSDRFLSPSQSLRFSPPHEPLPLGTRTRTGLPETAFKAISGASVSANSSIPRSVFMVDSVYDDATDTALGACGSGCGVRGSILNGFESTSSFTALPLQPVPRGGTEPLERGGFFLSGPIERGALSGPLDANVDGGGGGGAGGGGGGSGGAGRVHFSAPLGGMYVKKKRKKSISGFRKAFTRNFSDKRPWVVPVLNFVGRKDSSTAGDEPELRNESDVQWALGKAGEDRVHVVVSEEQGWLFVGIYDGFNGPDAPEFLMGNLYRAVFNELQGLFWEIDDNEEAANSNPSNIAEESTVSVNETNADPSSRASSQRIETNGNEAEVEPPATDRGSVKRVTFQSEVGSENRRRRRLWEYLAEDDTQDGLDLSGSERFAFSVDDALSVNSAGSVAGRRWLLLSKLKQGLSKHKEGNVKTLFPWKYGLGDKEKAEAENRVEETSYRSGKRRKEGLIDHELVLGALSRALEITELAYLDMTDKLLDTNPELALMGSCLLVVLMRDEDVYVMNLGDSRAIVAQYEQQKVGPSEDMKEEGDKGTGMEGIIEESTTSEGKITRTNQPSAQTTRLTALQLSTDHSTSIEEEVRRIKNEHPDDKRCIVNDRVKGRLKVTRAFGAGFLKQPKLNDVLLEMFRNEYIGTAPYLSCLPSLRHHKLCPTDQFIVLSSDGLYQYLTNEEVVSYVENFMEKFPDGDPAQHLIEELLCRAARKAGMDFHELLDIPQGDRRKYHDDVTVMVISLEGRIWKSSGKYL 803
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 7922076 7927369 - CmoCh16G011200.1 Cmo16g01120 400155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo16g01120 803 MobiDBLite consensus disorder prediction 340 397 - -
Cmo16g01120 803 CDD PP2Cc 503 791 IPR001932 -
Cmo16g01120 803 MobiDBLite consensus disorder prediction 340 375 - -
Cmo16g01120 803 SUPERFAMILY PP2C-like 279 792 IPR036457 -
Cmo16g01120 803 MobiDBLite consensus disorder prediction 65 85 - -
Cmo16g01120 803 Pfam Protein phosphatase 2C 624 756 IPR001932 -
Cmo16g01120 803 PANTHER PROTEIN PHOSPHATASE 2C 21 801 IPR015655 GO:0004722|GO:0006470
Cmo16g01120 803 SMART PP2C_4 267 789 IPR001932 -
Cmo16g01120 803 Gene3D - 256 798 IPR036457 -
Cmo16g01120 803 ProSiteProfiles PPM-type phosphatase domain profile. 268 791 IPR001932 -
Cmo16g01120 803 PANTHER PROTEIN PHOSPHATASE 2C 29 21 801 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo07g01039 Cmo-Chr7:5258432 Cmo16g01120 Cmo-Chr16:7922076 4.94E-42 dispersed
Cmo16g01120 Cmo-Chr16:7922076 Cmo20g00446 Cmo-Chr20:2072912 1.17E-47 dispersed
Cmo16g01120 Cmo-Chr16:7922076 Cmo06g00871 Cmo-Chr6:4968977 1.82E-20 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo16g01120 - - bhj:120092087 1470.68