Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo16g01257 | ATGTTTACATGCATAGCATGTACGAAACAGACAGACGACGGGGGTGAGGATGGGGCTGCGCGTGGTAGTGGCACGCCTAGTACAAAGGAAGCCGTCAAAAGCCTGACAACACAGATTAAGGACATGGCGTTGAAATTCTCCGGTGCTTATAGACAGTGCAAACCCTGCACAGGCTCCAGTAGCTATAAGAAAGGACAGCGACCTTACCCAGATTTTGACACTGCTTCAGAAGGGGTTCCATACCCCTACATAGGAGGGGCTAGTGCAAGCTCAACCCCTGCCTGGGACTTCCCTCGTGTTAATCGCCACCCACATACCAGATCTGACTCTAGATTTAAAGGGGTCTTCCGAGGAGATCAGACTCCTGGAGCCGATTCCTCCATATCAGCATGTGATGTGGTGCTCGAGGATGAGGATGAGTCGAAAGAGTGGATGGCACAGGTGGAGCCTGGTGTTCACATCACTTTTGTGTCCCTACCCAATGGAGGCAATGATTTAAAACGAATTCGTTTCAATCGAGAAATGTTTAACAAATGGCAAGCTCAGCGTTGGTGGGGCGAGAACTATGACAGAATAACGGAGCTCTATAATGTCCAGAGATTCAACCAGCAAGCTCTTCATACGCCACCAAGAACTGAGGACGGGAGGGATTCTTCCTACTCAAAGATGGGAAGGGATAGTCCGATGACTTCAGGGAACAAAGATTGGACGCCAAGAAACTATAAACCTTCTGGGAGTAAAGGATTTCCATCTGACCAGCATTTTGACCAAGGAAGCAGTCACCATTATGCAGGTTCAAGTGCCTATCCAGCAGGTAGCGCGAAAGGCGACATGTCGTCTATGGAAGCATCACGCACAACTACCTCTTCTAGAGACGAGCCTTCAATTTCCATTAGCAATGCAAGCGACATCGAGGCGGAGTGGGTCGAGGAAGATGATCCCGGGGTCTATATAACTATCAGGCAGCTTGTTGATGGCACTAGAGAGCTTCGTCGTGTCAGATTCAGCCGTGAAAAGTTCGGGGAAATGAACGCGAAGCAATGGTGGGATGAGAACAGGGAGAGGATCCAAGCTCAATACCTTTAA | 1086 | 49.26 | MFTCIACTKQTDDGGEDGAARGSGTPSTKEAVKSLTTQIKDMALKFSGAYRQCKPCTGSSSYKKGQRPYPDFDTASEGVPYPYIGGASASSTPAWDFPRVNRHPHTRSDSRFKGVFRGDQTPGADSSISACDVVLEDEDESKEWMAQVEPGVHITFVSLPNGGNDLKRIRFNREMFNKWQAQRWWGENYDRITELYNVQRFNQQALHTPPRTEDGRDSSYSKMGRDSPMTSGNKDWTPRNYKPSGSKGFPSDQHFDQGSSHHYAGSSAYPAGSAKGDMSSMEASRTTTSSRDEPSISISNASDIEAEWVEEDDPGVYITIRQLVDGTRELRRVRFSREKFGEMNAKQWWDENRERIQAQYL | 361 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
16 | 8964554 | 8970308 | + | CmoCh16G012570.1 | Cmo16g01257 | 400292 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo16g01257 | 361 | MobiDBLite | consensus disorder prediction | 203 | 299 | - | - | |
Cmo16g01257 | 361 | Pfam | Transcription factor BRX N-terminal domain | 23 | 56 | IPR027988 | - | |
Cmo16g01257 | 361 | PANTHER | PROTEIN BREVIS RADIX-LIKE 1 | 1 | 361 | IPR044532 | - | |
Cmo16g01257 | 361 | MobiDBLite | consensus disorder prediction | 11 | 30 | - | - | |
Cmo16g01257 | 361 | MobiDBLite | consensus disorder prediction | 223 | 266 | - | - | |
Cmo16g01257 | 361 | ProSiteProfiles | BRX domain profile. | 306 | 361 | IPR013591 | - | |
Cmo16g01257 | 361 | PANTHER | BREVIS RADIX-LIKE PROTEIN-RELATED | 1 | 361 | - | - | |
Cmo16g01257 | 361 | ProSiteProfiles | BRX domain profile. | 142 | 197 | IPR013591 | - | |
Cmo16g01257 | 361 | MobiDBLite | consensus disorder prediction | 279 | 299 | - | - | |
Cmo16g01257 | 361 | Pfam | Transcription factor regulating root and shoot growth via Pin3 | 305 | 360 | IPR013591 | - | |
Cmo16g01257 | 361 | Pfam | Transcription factor regulating root and shoot growth via Pin3 | 142 | 196 | IPR013591 | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cmo06g00612 | Cmo16g01257 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo16g01257 | Cmo-Chr16:8964554 | Cmo17g00676 | Cmo-Chr17:6922676 | 3.82E-09 | dispersed | |
Cmo16g01257 | Cmo-Chr16:8964554 | Cmo06g00612 | Cmo-Chr6:3019440 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo16g01257 | - | - | csv:101210860 | 716.457 |