Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo16g01271 ATGCTCCTCCTGGGCTGGATTATGATAGAGATAAAAGGTTCTCTAAGTTGTAATCAGTCTTTTAAAGAAATGGTTGCAATGTGCCTGGTGAAAGATCAAACGAAGAGGCCAACAGCTGAAAAACTTTTAAAGCACTCATTTTTCAAGCATGCAAAGCCTCCAGAGCTTTCTTTGAAGAAACTATTCGCTAACTTGCCTCCACTTTCACATCGTGTAAAGGACCTCCAGCTTAAAGATGCTGCCCAGCTAGCCTTAAAAAAAATGCCTTCATCAGAGCAAGAAGCATTATCACAGAGTGAGTACCAGCGAGGAGTTAGTGCATGGAACTTTGATGTTGAGGATTTGAAAGCCCAAGCTTCCCTGGTGAATAATGATATGGCAGAGATGAAGGAAGAGGAGGAAAGTATAAATTCTTGTAGTGTTAAGGATGCTTTTTGCCCTCAATCTAGTTTGAGGAATTTCAATTCATGTAATGAATCATCTCAGGATGAACATGGAGCAGGGGCAAGTGGTCAGGGATTGCCACAAGTGGAGTGCTTGAGCAAAAAAGGAAACTTTATGGAAAATGATAAGCTGAAAGGTGGGTTGCAAGAAAAAACTGGATGGAGTAGAAATGGAACGAGCACCGAAGCAGAAGCATCTACCTCTGGCCAAGACATTGTACAAGGCAAGCCCAAAACTCAAATGCCAAAAGGTCGTCAAACTCAAAGTGGTCCAATTCTGCCCGGTATTGTGCTCAGTCATTCTTTATCAGAAAGAGTGCGAGGCTCTGAGAGGTTTGATTCTGAAATTCAACCATCTACTGAAAAAAATCGTCGTGAGGCACGGCAAGCTCCAAGCTTCAGTGGTCCACTAATGCTGCCAAACCGTGCTTCTGCAAACAGCCTATCAGCTCCCATAAAATCTTCTGGAGGGTTTAGAGATTCAATGGATGAAAAATCCAAAGCTAATCTTGTGCAAATTAAGGGACGTTTTTCAGTGACATCAGAGAACCTAGATCTCGTAAAGGATATTCCATTGAGCACAGTTTCACGTCGGTCTTCACAGAACTCGCCTCTACGAAAGTCGGCTAGTGTCGGTGATTGGATATTTGATTCCAAGCAGTCTGTCAGCCAACCCCCTAAGGAGTCTTGCAACACCAACTTACCCACATCAATTCTTTTGCCTCATCTTCAGAATCTTTTCCATCAGACCTCAATTCAACAGGATCTTATAATGAACTTATTGAATAGCTTGCAAACAGCAGACGTGGTTGATGCTACTCAAAATGGAAAGTTGCCTCCTTTGCCTCGAAACTCAGAGAACAATGGAATGGCTGAAACAGCAGCTGTTGAGAGAGAGCGCTTACTGATGCGGAAAGTCTCTGAACTTCAAGCTAGAATGACGCATTTGACCTATGAATTGACCGCTGAAAAGTTGAAGTACATTCAATTACAAGAGCAGTTCAACTCGACTTCTGGTCAGGAAGAAAATGAGATCAAGAGGGAAGAAAATAGAAATAATTATGCAGTAAATTGTTTCTGGACATTCAACTCTTTGGAGAATGTCTATTGTTGGCATATGTTAATAGCTCTGTTGTTGAGGCGAAGCCAGCAACCATTTTTCTCATTCTCCCATCGCCATCTTCATTTGGTTCTTCAGAGTTCGCATAATTCAGGTCAGTTGGAGTTCATCCCTAATACTAAGTGGCAGTCAGCTCCAAAAACTCCAATCTTGTTATTGTCTGAATGGCCAAGAGATGGAAGAAAAAGATAA 1755 42.05 MLLLGWIMIEIKGSLSCNQSFKEMVAMCLVKDQTKRPTAEKLLKHSFFKHAKPPELSLKKLFANLPPLSHRVKDLQLKDAAQLALKKMPSSEQEALSQSEYQRGVSAWNFDVEDLKAQASLVNNDMAEMKEEEESINSCSVKDAFCPQSSLRNFNSCNESSQDEHGAGASGQGLPQVECLSKKGNFMENDKLKGGLQEKTGWSRNGTSTEAEASTSGQDIVQGKPKTQMPKGRQTQSGPILPGIVLSHSLSERVRGSERFDSEIQPSTEKNRREARQAPSFSGPLMLPNRASANSLSAPIKSSGGFRDSMDEKSKANLVQIKGRFSVTSENLDLVKDIPLSTVSRRSSQNSPLRKSASVGDWIFDSKQSVSQPPKESCNTNLPTSILLPHLQNLFHQTSIQQDLIMNLLNSLQTADVVDATQNGKLPPLPRNSENNGMAETAAVERERLLMRKVSELQARMTHLTYELTAEKLKYIQLQEQFNSTSGQEENEIKREENRNNYAVNCFWTFNSLENVYCWHMLIALLLRRSQQPFFSFSHRHLHLVLQSSHNSGQLEFIPNTKWQSAPKTPILLLSEWPRDGRKR 584
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 9072710 9082154 - CmoCh16G012710.1 Cmo16g01271 400306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo16g01271 584 MobiDBLite consensus disorder prediction 252 276 - -
Cmo16g01271 584 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 18 491 - -
Cmo16g01271 584 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 18 491 - -
Cmo16g01271 584 MobiDBLite consensus disorder prediction 200 235 - -
Cmo16g01271 584 Coils Coil 112 132 - -
Cmo16g01271 584 SUPERFAMILY Protein kinase-like (PK-like) 16 105 IPR011009 -
Cmo16g01271 584 Gene3D Transferase(Phosphotransferase) domain 1 8 80 - -
Cmo16g01271 584 MobiDBLite consensus disorder prediction 188 290 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo06g00592 Cmo16g01271 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo16g01271 Cmo-Chr16:9072710 Cmo04g02836 Cmo-Chr4:20276632 2.33E-37 dispersed
Cmo16g01271 Cmo-Chr16:9072710 Cmo06g00592 Cmo-Chr6:2913131 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo16g01271 - - csv:101213683 852.818