Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo16g01308 ATGCCGATTGAAGATGATGTTGAGAGCTGCGGTAGCCGAGCCTCTGACTCCTCCTCGTCCCAAGCGAACCCGAGGCATCATCGACAGAAGCTTGATGTCTACAACGAAGTGCTCCGACGAATCCAGGAATCCAATTTTCATGAGGCGAATCTACCTGGATTTGATGATCAGCTATGGCTTCATTTCAATCGCCTCCCGGCTCGGTATCTTCCTTGCTTCCTCTCTCCTTTTCGATTATGTGCTAATTGCTTCTATGAACAATATCGTGGATTTATGGTTGCAGATTGTAAAGCGGATCAGTTGTTTTGTACATACGCATTGGATGTGAATGTCGACAGGGCGGAAGATGTACTCATGCATAAGAGATTACTTCAATTGGCTGTAGACCCTGCTAACCGACCCGCATTCGACGTTCGTTCTGTGCAGGTAAAGCTTAAAAGTGCAACTCAATTGCATGAAACATTGTATCAGTTCAACTGCCAGCTCCTCTTTTCTTTGTTATTATTGGTAATGGGCATTATTTGTAGTATAAGTATAGATATTGAAATAGTTTGTGGTTTCAGAGAGTTGGAAGCCATGACAATGTTTCTTTTGGTCATGCAGGTTTATCCTTCTGCTAATGAAAACTTTATCAATTCTTCTTTTTTGGATTCTTCAATGACGGAAGATGCTCAGAGCTCTTTGAATTATTCTAACAGACAAGGGAACCTTCCACCTCCAACCTTTGGTTCTTCTCCTAATCTTGAAGCATTTGCGGTTCAGGCCTGCAAAACAGCTCAACAAAATAGATATTCTTCAAGTGGCAGTGAGATATATAACTTGGTACAAAACTATAAAGCTAAGGCCCTGCACAATAATAACGTTCTTCTTTTTCTGTATGCAATGCCAATGCATGAGATCACATTTGCGACAATTGACAAGCCTAAACTCCTTAGTGAGTTAACTTGCTTCCTAGCTGATGTTGGACTTAACATACAAGAAGCTCATGCTTTCTCCTCTGTTGATGGTTTCTCTCTGGATGCTTTTGTCATCGATGGATGGCCTTATGAGGTAAGAAACCGAGGAGCTGAAAAGGAAAAGCAGCCCAGTCCTGCTTTGGGTAAGCATAACCAGAATAGAGTTGAATCTTTTCCTTGTTGTGTTGAAATACCTACTGATGGTACTGATGTCTGGGAAATTGACACCAGACAACTAAAATTTGAGAATAAAGTTGGATCCGGGTCGTACGGGGACCTGTATCGGGGCACTTATTGTAGTCAGGAAGTAGCTATTAAAGTACTGAGGCCTGAGCGTCTTAGCGAAGAGATGGTCAAAGAATTCTCTCAAGAAGTTTATATAATGAGGAAAGTTCGGCACAAAAATGTTGTTCAATTCATTGGAGCATGTACCAAACCTCCAAACCTCTGCATCGTGACGGAGTTTATGTCGAGAGGAAGTCTATATGACTTCCTTCATAAGCAAAGAGGTGTATTTAACCTTCCATCTTTACTTAAAGTAGCCATTAACATTTCAAGAGGGATGAACTATTTGCATCAAAATAATATAATCCATCGAGACCTCAAGACTGCCAATCTTCTGATGGATGAAAACATGGTGAGAGGAATTCATAGAAGCTTTTATACTTATGTTTTGTGCATTTACGTGGGCGTTAACATGGATGTTGTTAAGGTTGCTGATTTTGGAGTTGCCAGAGTTCAAACCCAATCTGGAGTAATGACAGCTGAAACTGGAACATACCGGTGGATGGCTCCTGAAGTTATTGAGCATAAACCATATGACCATAAGGTAGATGTTTTCAGCTTTGGAATAGCTTTATGGGAGCTTTTAACCGGAGAAATTCCTTACTCATCCATGACCCCATTACAAGCAGCTGTTGGCGTAGTCCAGAAGAGACTGCGACCCACAATACCGAAGAATGCTCATCCCGTTGTTGCTGAACTGCTTGAAAGATGCTGGAGGCAGGATCCAACCGAACGGCCAAACTTCTCTGAAATTTTAGAGATACTCAAACAGATAGCTGAGCAGGTAACGTCAAAAACAACGGGGAAAATCGACGCAAGAAGGATAAAATATCGGGTGCGTTCTTCTCAGCCTTCAAGAGGGAGCACCACTGAATACACTGGACGAGCTTCGCCAGAGGTACAATGGTGCTGGTAA 2157 42.14 MPIEDDVESCGSRASDSSSSQANPRHHRQKLDVYNEVLRRIQESNFHEANLPGFDDQLWLHFNRLPARYLPCFLSPFRLCANCFYEQYRGFMVADCKADQLFCTYALDVNVDRAEDVLMHKRLLQLAVDPANRPAFDVRSVQVKLKSATQLHETLYQFNCQLLFSLLLLVMGIICSISIDIEIVCGFRELEAMTMFLLVMQVYPSANENFINSSFLDSSMTEDAQSSLNYSNRQGNLPPPTFGSSPNLEAFAVQACKTAQQNRYSSSGSEIYNLVQNYKAKALHNNNVLLFLYAMPMHEITFATIDKPKLLSELTCFLADVGLNIQEAHAFSSVDGFSLDAFVIDGWPYEVRNRGAEKEKQPSPALGKHNQNRVESFPCCVEIPTDGTDVWEIDTRQLKFENKVGSGSYGDLYRGTYCSQEVAIKVLRPERLSEEMVKEFSQEVYIMRKVRHKNVVQFIGACTKPPNLCIVTEFMSRGSLYDFLHKQRGVFNLPSLLKVAINISRGMNYLHQNNIIHRDLKTANLLMDENMVRGIHRSFYTYVLCIYVGVNMDVVKVADFGVARVQTQSGVMTAETGTYRWMAPEVIEHKPYDHKVDVFSFGIALWELLTGEIPYSSMTPLQAAVGVVQKRLRPTIPKNAHPVVAELLERCWRQDPTERPNFSEILEILKQIAEQVTSKTTGKIDARRIKYRVRSSQPSRGSTTEYTGRASPEVQWCW 718
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
16 9294327 9301006 + CmoCh16G013080.1 Cmo16g01308 400343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo16g01308 718 ProSiteProfiles ACT domain profile. 299 376 IPR002912 -
Cmo16g01308 718 SUPERFAMILY ACT-like 296 346 IPR045865 -
Cmo16g01308 718 ProSitePatterns Protein kinases ATP-binding region signature. 404 425 IPR017441 GO:0005524
Cmo16g01308 718 SUPERFAMILY Protein kinase-like (PK-like) 375 669 IPR011009 -
Cmo16g01308 718 Pfam Protein tyrosine and serine/threonine kinase 398 669 IPR001245 GO:0004672|GO:0006468
Cmo16g01308 718 PANTHER ACT-LIKE TYROSINE KINASE FAMILY PROTEIN 100 150 - -
Cmo16g01308 718 PANTHER ACT-LIKE TYROSINE KINASE FAMILY PROTEIN 199 686 - -
Cmo16g01308 718 PANTHER ACT-LIKE TYROSINE KINASE FAMILY PROTEIN 17 60 - -
Cmo16g01308 718 MobiDBLite consensus disorder prediction 1 28 - -
Cmo16g01308 718 MobiDBLite consensus disorder prediction 695 718 - -
Cmo16g01308 718 ProSitePatterns Serine/Threonine protein kinases active-site signature. 515 527 IPR008271 GO:0004672|GO:0006468
Cmo16g01308 718 SMART serkin_6 398 672 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo16g01308 718 CDD STKc_MAP3K-like 404 669 - -
Cmo16g01308 718 Gene3D Transferase(Phosphotransferase) domain 1 477 709 - -
Cmo16g01308 718 PRINTS Tyrosine kinase catalytic domain signature 472 485 IPR001245 GO:0004672|GO:0006468
Cmo16g01308 718 PRINTS Tyrosine kinase catalytic domain signature 596 618 IPR001245 GO:0004672|GO:0006468
Cmo16g01308 718 PRINTS Tyrosine kinase catalytic domain signature 577 587 IPR001245 GO:0004672|GO:0006468
Cmo16g01308 718 PRINTS Tyrosine kinase catalytic domain signature 640 662 IPR001245 GO:0004672|GO:0006468
Cmo16g01308 718 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 100 150 - -
Cmo16g01308 718 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 199 686 - -
Cmo16g01308 718 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 17 60 - -
Cmo16g01308 718 ProSiteProfiles Protein kinase domain profile. 398 672 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo16g01308 718 MobiDBLite consensus disorder prediction 695 710 - -
Cmo16g01308 718 Gene3D Phosphorylase Kinase; domain 1 388 476 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo11g01758 Cmo-Chr11:12398386 Cmo16g01308 Cmo-Chr16:9294327 1.68E-27 dispersed
Cmo16g01308 Cmo-Chr16:9294327 Cmo19g00771 Cmo-Chr19:7783849 1.82E-33 dispersed
Cmo01g02052 Cmo-Chr1:14338856 Cmo16g01308 Cmo-Chr16:9294327 9.36E-24 wgd
Cmo16g01308 Cmo-Chr16:9294327 Cmo06g00132 Cmo-Chr6:722214 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
74984 PF07714 PK_Tyr_Ser-Thr 2.40E-70 CL0016 Cmo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo16g01308 - - csv:101220844 734.947