Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo16g01342 | ATGTCGTTGAAGCCTTCGGATTTGGACTCTTCAGCTTTTGATGCGCAATCTTCGTCCAATCCGATTCCCTCGGATGCTACTCCGGTTCCCTTGGATCCCCCCTCCACCTCCTCCACCCTCTCTGAATCTGAAGAAAATCACTGCTCATCGTCCTCACCTTCCTCCACACCACCTCCGGTTCATTTACCTCTCTCTTGGCCTCCCGATGCCACTCTTTCCCTTCAATGGATTCAGCATCTCATCGCCGCTTTCGATTGGTCTTCCAAAAATTTATCTCCATCCGAGTTTCCTTCTGTTCTTCCCGTCTCTGTTTTCGACACTCTAATCCTCACAGCTTCCAAAATCCTCCACAAAGAACCCAATTGCCTTAGAATCCTCGACGACTCAGTCGCCAGCAGCGACTCGACTGTAGTCGTTGTCGGAGACATCCACGGGCAATTTCATGATCTCATCTTTCTTCTGCAGGATGCTGGGTTTCCTTCTGATAATCGTTTCTTTGTCTTCAATGGTGATTACGTCGACAGAGGGGCTTGGGGTCTTGAAACTTTTATTCTCTTATTGGCTTGGAAGGTGTTTATGCCACATCGGGTATTTCTTCTTCGTGGAAACCACGAGTCCAAGTACTGCACATCCGTTTATGGTTTTGAGAAGGAGGTTCTAACCAAGTACGGAGACAAAGGTAAGCATGTCTATCGGAAGTGTTTGGGGTGTTTCGAAGGGCTGCCTTTGGCCTCCATTATAGCTGGACGTGTATTTACGGCTCATGGAGGACTTTTCCGCAGCATATCAGTTCCTTCATCTAAAAGATCAAAAGGGAAGAAAAATCGTAGGATAATCTTAAATCCTGAAGCCAACGGGTTATCTCTTGGTTCATTAGAGGAACTATCCAAAGCCAGAAGATCGGTTCTTGATCCCCCATGGGAAGGCTTGAATTTAATACCTGGTGATGTGTTGTGGTCTGATCCCTCGATGACTCCCGGGCTCTCCCCAAATAGAGAGAGAGGCATAGGTCTCTTGTGGGGTCCTGATTGCACTGAAGAATTCTTGAAAAAATTCGATCTGAAGCTAATTATCAGATCCCATGAAGGTCCTGATGCTAGAGAAAAGAGACCCGGTCTTGGAGGAATGGATCAGGGTTACACGATAGATCATGTTGTAGATTCTGGGAAATTGATTACTTTGTTTAGTGCTCCAGACTATCCACAATTTCAGGCTACTGGGAAGAGGTACAAAAATAAAGGTGCATATATTGTTCTAGAACCTCCGAATTTTGATGTTCCACTCATTCATAGTTTTGAAGCCATTACTCCACGACCGAAGGTCAATGCGTACTATGATTTTGAGGATGTAATTGACTCTGACGAAGAATTAGATTTGGCAACAATGACAACTGATTCATGA | 1401 | 45.32 | MSLKPSDLDSSAFDAQSSSNPIPSDATPVPLDPPSTSSTLSESEENHCSSSSPSSTPPPVHLPLSWPPDATLSLQWIQHLIAAFDWSSKNLSPSEFPSVLPVSVFDTLILTASKILHKEPNCLRILDDSVASSDSTVVVVGDIHGQFHDLIFLLQDAGFPSDNRFFVFNGDYVDRGAWGLETFILLLAWKVFMPHRVFLLRGNHESKYCTSVYGFEKEVLTKYGDKGKHVYRKCLGCFEGLPLASIIAGRVFTAHGGLFRSISVPSSKRSKGKKNRRIILNPEANGLSLGSLEELSKARRSVLDPPWEGLNLIPGDVLWSDPSMTPGLSPNRERGIGLLWGPDCTEEFLKKFDLKLIIRSHEGPDAREKRPGLGGMDQGYTIDHVVDSGKLITLFSAPDYPQFQATGKRYKNKGAYIVLEPPNFDVPLIHSFEAITPRPKVNAYYDFEDVIDSDEELDLATMTTDS | 466 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
16 | 9465540 | 9471706 | + | CmoCh16G013420.1 | Cmo16g01342 | 400377 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo16g01342 | 466 | PANTHER | SERINE/THREONINE-PROTEIN PHOSPHATASE 7 | 43 | 462 | - | - | |
Cmo16g01342 | 466 | MobiDBLite | consensus disorder prediction | 1 | 62 | - | - | |
Cmo16g01342 | 466 | SUPERFAMILY | Metallo-dependent phosphatases | 95 | 437 | IPR029052 | - | |
Cmo16g01342 | 466 | ProSitePatterns | Serine/threonine specific protein phosphatases signature. | 200 | 205 | IPR006186 | GO:0016787 | |
Cmo16g01342 | 466 | PANTHER | SERINE/THREONINE-PROTEIN PHOSPHATASE 5-RELATED | 43 | 462 | - | - | |
Cmo16g01342 | 466 | SMART | pp2a_7 | 100 | 439 | IPR006186 | GO:0016787 | |
Cmo16g01342 | 466 | CDD | MPP_PP7 | 66 | 446 | IPR041754 | - | |
Cmo16g01342 | 466 | Gene3D | - | 92 | 455 | IPR029052 | - | |
Cmo16g01342 | 466 | Pfam | Calcineurin-like phosphoesterase | 136 | 364 | IPR004843 | GO:0016787 | |
Cmo16g01342 | 466 | MobiDBLite | consensus disorder prediction | 1 | 55 | - | - | |
Cmo16g01342 | 466 | PRINTS | Serine/threonine phosphatase family signature | 136 | 163 | IPR006186 | GO:0016787 | |
Cmo16g01342 | 466 | PRINTS | Serine/threonine phosphatase family signature | 166 | 193 | IPR006186 | GO:0016787 | |
Cmo16g01342 | 466 | PRINTS | Serine/threonine phosphatase family signature | 199 | 223 | IPR006186 | GO:0016787 | |
Cmo16g01342 | 466 | PRINTS | Serine/threonine phosphatase family signature | 236 | 262 | IPR006186 | GO:0016787 | |
Cmo16g01342 | 466 | PRINTS | Serine/threonine phosphatase family signature | 296 | 323 | IPR006186 | GO:0016787 | |
Cmo16g01342 | 466 | PRINTS | Serine/threonine phosphatase family signature | 390 | 406 | IPR006186 | GO:0016787 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo04g02756 | Cmo-Chr4:19941647 | Cmo16g01342 | Cmo-Chr16:9465540 | 1.02E-133 | dispersed | |
Cmo16g01342 | Cmo-Chr16:9465540 | Cmo11g02029 | Cmo-Chr11:13832130 | 1.57E-52 | dispersed | |
Cmo16g01342 | Cmo-Chr16:9465540 | Cmo06g00163 | Cmo-Chr6:865841 | 1.74E-41 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo16g01342 | K04460 | - | csv:116402510 | 793.497 |