Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo17g00046 ATGAGCGGCGGAGGTGAAGGAACGACGCTGGAATTCACCCCGACGTGGGTTGTTGCCGCCGTCTGTACCGTCATCGTCGCCATTTCCCTCGCCTTAGAGCGCCTCTTACACTTCCTCGGAAAATACCTCAAGAAAAAGAACCAGAAGCCGCTCTATGAAGCTCTTCAGAAAGTTAAAGAAGAATTGATGCTTTTGGGGTTTATTTCGCTTCTGCTCACTGTATTTCAAGGCGTTATCTCAAAATTATGTGTTCCTGAGAGTTTGACCGAGCATTTCCTTCCGTGTAATCTGAAGGATAAAGCTAAAGCTGAACACGATTCGCACTCTGGTGAAACTGGTTCGTCAACGACGAAACATTTTCAAACGTTCTTTGTTTCGAGTATTTCTGGCTCGGCCAGGCGCCTTCTATCTGAGGGATCGGCTGCACAGGCTGGTTATTGTGGTAAAAAGAATAAGGTGCCATTGCTATCACTTGAAGCATTACATCATTTACATATTTTTATCTTCATCCTAGCTATTGTCCACGTGTCATTTTGCGTTCTCACTGTAGTTTTTGGAGGATTGAAGATTCGTCAGTGGAAGCATTGGGAGGATTCTATTGCAAAAGAGAATTACGATACCGAACAAGTTCTAAAACCAAAAGTCACCCACGTCCATCAACATGCTTTTATCAAGGACCACTTTTTGGGTATTGGTAAAGATTCAGCTCTTCTGGGTTGGTTGCATTCCTTCCTCAAGCAATTTTATGCTTCTGTTACTAAATCAGATTATATAACGTTAAGGCTTGGTTTCATTATGACACACTGCAGGGGCAACCCGAAGTTTAATTTTCACAAGTACATGATACGTGCGCTTGAAGATGATTTCAAGCATGTTGTCGGTATCAGTTGGTATCTTTGGATCTTCGTGGTTGTCTTCTTGTTCCTTAATGTTAACGGTTGGCATACATATTTCTGGATAGCATTCATTCCTTTCGTTCTTCTGCTCGCTGTGGGAACAAAGCTGGAACATGTGATAACCCAGCTGGCTCACGAGGTTGCCGAGAAGCACATAGCAATTGAAGGCGAGCTAGTAGTCCAACCATCTGATGATCACTTTTGGTTTCAGCGGCCCCGTTTTGTTCTCTTCTTGATCCACTTCATACTATTCCAAAATGCTTTCGAGATTGGATTTTTCTTCTGGATATGGGTTCAATATGGCTTTGACTCGTGCATCATGGGCCAAGTCCGCTATATCATTCCAAGGCTTATTATTGGGGTGTTTATTCAGGTTCTTTGCAGTTACAGCACCCTACCGCTCTACGCCATCGTCACTCAGATGGGAAGTTCTTTCAAGAAAGCAATCTTTGATGAACATGTACAAGTAGGCCTAGTTGGTTGGGCCCAGAAGGTGAAGAAAAGAAAGGGACTTAGAGCAGCTGCCGATGCCTCCAGCCAAGGAGGCAAGGAAGGTAGTTCTACTGTGGGGGGTATTCAACTGGGAAGTGCAATGCGCAAGGCTTCTGCACCTCAAGAAATTAAGCCTGATGGCTCCAAATCCGATGGTCTGCCTTAG 1554 44.4 MSGGGEGTTLEFTPTWVVAAVCTVIVAISLALERLLHFLGKYLKKKNQKPLYEALQKVKEELMLLGFISLLLTVFQGVISKLCVPESLTEHFLPCNLKDKAKAEHDSHSGETGSSTTKHFQTFFVSSISGSARRLLSEGSAAQAGYCGKKNKVPLLSLEALHHLHIFIFILAIVHVSFCVLTVVFGGLKIRQWKHWEDSIAKENYDTEQVLKPKVTHVHQHAFIKDHFLGIGKDSALLGWLHSFLKQFYASVTKSDYITLRLGFIMTHCRGNPKFNFHKYMIRALEDDFKHVVGISWYLWIFVVVFLFLNVNGWHTYFWIAFIPFVLLLAVGTKLEHVITQLAHEVAEKHIAIEGELVVQPSDDHFWFQRPRFVLFLIHFILFQNAFEIGFFFWIWVQYGFDSCIMGQVRYIIPRLIIGVFIQVLCSYSTLPLYAIVTQMGSSFKKAIFDEHVQVGLVGWAQKVKKRKGLRAAADASSQGGKEGSSTVGGIQLGSAMRKASAPQEIKPDGSKSDGLP 517
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 229009 235832 + CmoCh17G000460.1 Cmo17g00046 400429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo17g00046 517 MobiDBLite consensus disorder prediction 495 517 - -
Cmo17g00046 517 PANTHER MLO-LIKE PROTEIN 1 505 - -
Cmo17g00046 517 Pfam Mlo family 8 479 IPR004326 GO:0006952|GO:0016021
Cmo17g00046 517 PANTHER MLO-LIKE PROTEIN 1 1 505 IPR004326 GO:0006952|GO:0016021
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo17g00046 Cmo-Chr17:229009 Cmo02g00883 Cmo-Chr2:5467485 1.53E-141 dispersed
Cmo17g00046 Cmo-Chr17:229009 Cmo08g00962 Cmo-Chr8:6232734 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo17g00046 K08472 - csv:101211868 943.34