Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo17g00061 ATGAAACCGGAAAATCTGCTACTCGATCAGGACGGAAACCTTAAGGTCACCGATTTTGGCCTCACCGCCTTCTCGGAGCATTTGAAGCAAGACGGACTGTTGCACACGACATGCGGAACTCCGGACGACAATATGGTGGCGATGTACCGGAAGATTTACAGAGGCGATTTCAGGTGTCCACCGTGGTTCTCTCCCGAAGCTCGCCGCCTTGTCACGAAGCTTCTAGATCTGAATCCAGTGACCAGAGTCGGTATCGCGAAGATCACATCGTCGTTATGGTTCAAGAAATCGGTACCGAAGAGTGTGATTACGAAGGAGCATGAAGAAATGGAGGAGAATTTGGCGAAATCGAATCAACCGGCGGAAACGTTGAACGCATTCCACATAATATCTCTATCGGAAGGGTTTGATTTGTCGCCGTTGTTCGAAGAGAAGAAGAGGGAGGAGAAAGAGGAGATTAGATTCTTGACTTCATCTCCGGCGAGCAGTGTGATATCGAAGCTTGAGGAAGTGGCGAAGGCAGTGAAGTTCGATGTGAGGAAGAGCGAGTCGTGGGTTCGATTGCAGGGGCAAGAGAAGGGGAGAAAGGGGAAACTAGCGATTGCGGCGGATATCTTTGCGATGACGCCGTCGTTTGTGGTGGTGGAGGTGAAGAAGGACAATGGAGACACTTTAGAATACAATCAATTCTGCAGGGAGGAGCTCCGGCTGGCATTGAAGGACATTGTTTGGACTTCTCCGACTGGGAGCTTGACCCCAGCTTGA 765 50.46 MKPENLLLDQDGNLKVTDFGLTAFSEHLKQDGLLHTTCGTPDDNMVAMYRKIYRGDFRCPPWFSPEARRLVTKLLDLNPVTRVGIAKITSSLWFKKSVPKSVITKEHEEMEENLAKSNQPAETLNAFHIISLSEGFDLSPLFEEKKREEKEEIRFLTSSPASSVISKLEEVAKAVKFDVRKSESWVRLQGQEKGRKGKLAIAADIFAMTPSFVVVEVKKDNGDTLEYNQFCREELRLALKDIVWTSPTGSLTPA 254
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 309987 310863 - CmoCh17G000610.1 Cmo17g00061 400444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo17g00061 254 Gene3D Transferase(Phosphotransferase) domain 1 42 121 - -
Cmo17g00061 254 ProSiteProfiles Protein kinase domain profile. 1 186 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo17g00061 254 Pfam NAF domain 122 181 IPR004041 GO:0007165
Cmo17g00061 254 PANTHER - 42 247 - -
Cmo17g00061 254 ProSiteProfiles NAF domain profile. 119 143 IPR018451 GO:0007165
Cmo17g00061 254 Gene3D Kinase associated domain 1, KA1 122 245 - -
Cmo17g00061 254 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 42 247 - -
Cmo17g00061 254 Gene3D Transferase(Phosphotransferase) domain 1 1 41 - -
Cmo17g00061 254 PANTHER - 1 41 - -
Cmo17g00061 254 CDD CIPK_C 125 240 - -
Cmo17g00061 254 SUPERFAMILY Protein kinase-like (PK-like) 1 107 IPR011009 -
Cmo17g00061 254 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 1 41 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo17g00061 Cmo-Chr17:309987 Cmo12g01173 Cmo-Chr12:10616139 9.67E-153 dispersed
Cmo17g00061 Cmo-Chr17:309987 Cmo05g01262 Cmo-Chr5:9803375 2.05E-177 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo17g00061 - K07198 csv:101208458 427.943