Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo17g00061 | ATGAAACCGGAAAATCTGCTACTCGATCAGGACGGAAACCTTAAGGTCACCGATTTTGGCCTCACCGCCTTCTCGGAGCATTTGAAGCAAGACGGACTGTTGCACACGACATGCGGAACTCCGGACGACAATATGGTGGCGATGTACCGGAAGATTTACAGAGGCGATTTCAGGTGTCCACCGTGGTTCTCTCCCGAAGCTCGCCGCCTTGTCACGAAGCTTCTAGATCTGAATCCAGTGACCAGAGTCGGTATCGCGAAGATCACATCGTCGTTATGGTTCAAGAAATCGGTACCGAAGAGTGTGATTACGAAGGAGCATGAAGAAATGGAGGAGAATTTGGCGAAATCGAATCAACCGGCGGAAACGTTGAACGCATTCCACATAATATCTCTATCGGAAGGGTTTGATTTGTCGCCGTTGTTCGAAGAGAAGAAGAGGGAGGAGAAAGAGGAGATTAGATTCTTGACTTCATCTCCGGCGAGCAGTGTGATATCGAAGCTTGAGGAAGTGGCGAAGGCAGTGAAGTTCGATGTGAGGAAGAGCGAGTCGTGGGTTCGATTGCAGGGGCAAGAGAAGGGGAGAAAGGGGAAACTAGCGATTGCGGCGGATATCTTTGCGATGACGCCGTCGTTTGTGGTGGTGGAGGTGAAGAAGGACAATGGAGACACTTTAGAATACAATCAATTCTGCAGGGAGGAGCTCCGGCTGGCATTGAAGGACATTGTTTGGACTTCTCCGACTGGGAGCTTGACCCCAGCTTGA | 765 | 50.46 | MKPENLLLDQDGNLKVTDFGLTAFSEHLKQDGLLHTTCGTPDDNMVAMYRKIYRGDFRCPPWFSPEARRLVTKLLDLNPVTRVGIAKITSSLWFKKSVPKSVITKEHEEMEENLAKSNQPAETLNAFHIISLSEGFDLSPLFEEKKREEKEEIRFLTSSPASSVISKLEEVAKAVKFDVRKSESWVRLQGQEKGRKGKLAIAADIFAMTPSFVVVEVKKDNGDTLEYNQFCREELRLALKDIVWTSPTGSLTPA | 254 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
17 | 309987 | 310863 | - | CmoCh17G000610.1 | Cmo17g00061 | 400444 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo17g00061 | 254 | Gene3D | Transferase(Phosphotransferase) domain 1 | 42 | 121 | - | - | |
Cmo17g00061 | 254 | ProSiteProfiles | Protein kinase domain profile. | 1 | 186 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cmo17g00061 | 254 | Pfam | NAF domain | 122 | 181 | IPR004041 | GO:0007165 | |
Cmo17g00061 | 254 | PANTHER | - | 42 | 247 | - | - | |
Cmo17g00061 | 254 | ProSiteProfiles | NAF domain profile. | 119 | 143 | IPR018451 | GO:0007165 | |
Cmo17g00061 | 254 | Gene3D | Kinase associated domain 1, KA1 | 122 | 245 | - | - | |
Cmo17g00061 | 254 | PANTHER | NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE | 42 | 247 | - | - | |
Cmo17g00061 | 254 | Gene3D | Transferase(Phosphotransferase) domain 1 | 1 | 41 | - | - | |
Cmo17g00061 | 254 | PANTHER | - | 1 | 41 | - | - | |
Cmo17g00061 | 254 | CDD | CIPK_C | 125 | 240 | - | - | |
Cmo17g00061 | 254 | SUPERFAMILY | Protein kinase-like (PK-like) | 1 | 107 | IPR011009 | - | |
Cmo17g00061 | 254 | PANTHER | NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE | 1 | 41 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo17g00061 | Cmo-Chr17:309987 | Cmo12g01173 | Cmo-Chr12:10616139 | 9.67E-153 | dispersed | |
Cmo17g00061 | Cmo-Chr17:309987 | Cmo05g01262 | Cmo-Chr5:9803375 | 2.05E-177 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo17g00061 | - | K07198 | csv:101208458 | 427.943 |