Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo17g00112 | ATGCCTTCCCCTTCCCCCACATTCACGCATTTACTCGCACCCATCTCTATTTCTGCCCCGCCCGCCCTTGCTGCTGCAGCGTCCTTTTTCTTCACATTCACCCTTGTTTGCCTTGGAGATCGGCAAATGGGTGGCCACGGAAAGGTCTTTACATTGGCTGAAGTCTCTCAGCACAATACCCGCCAGGACTGTTGGTTGATCATCAATGGCAAGGTTTACAACGTAACCGAGTTCTTGGAAGACCATCCCGGTGGCGACGAGGTGTTGTTGTCTGGCACAGGTAAGGATGCAACAGATGATTTCGAAGACGTGGGTCATAGTGAGAGTGCAAGAGAAACGATGAACAAATACTATGTTGGAGACATTGACATCTCGACAATCCCTGAACGTTTGACATACACAGCTTCGAAGCAGCCTCACTACAATCAAGATAAGACGACCGAGTTCATCGTCAAGCTTCTCCAGTTCCTGGTCCCTCTCGCAATCTTGGGTCTGGCAGTTGGTATCCGCTTTTATAGCAAATCAACCTGA | 531 | 49.53 | MPSPSPTFTHLLAPISISAPPALAAAASFFFTFTLVCLGDRQMGGHGKVFTLAEVSQHNTRQDCWLIINGKVYNVTEFLEDHPGGDEVLLSGTGKDATDDFEDVGHSESARETMNKYYVGDIDISTIPERLTYTASKQPHYNQDKTTEFIVKLLQFLVPLAILGLAVGIRFYSKST | 176 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
17 | 595825 | 598375 | + | CmoCh17G001120.1 | Cmo17g00112 | 400495 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo17g00112 | 176 | ProSiteProfiles | Cytochrome b5 family, heme-binding domain profile. | 47 | 123 | IPR001199 | - | |
Cmo17g00112 | 176 | SMART | Cyt_b5_2 | 50 | 123 | IPR001199 | - | |
Cmo17g00112 | 176 | ProSitePatterns | Cytochrome b5 family, heme-binding domain signature. | 78 | 85 | IPR018506 | GO:0020037 | |
Cmo17g00112 | 176 | PANTHER | BNAC04G43300D PROTEIN | 43 | 174 | - | - | |
Cmo17g00112 | 176 | Pfam | Cytochrome b5-like Heme/Steroid binding domain | 51 | 122 | IPR001199 | - | |
Cmo17g00112 | 176 | PRINTS | Cytochrome B5 signature | 72 | 82 | IPR001199 | - | |
Cmo17g00112 | 176 | PRINTS | Cytochrome B5 signature | 110 | 122 | IPR001199 | - | |
Cmo17g00112 | 176 | PRINTS | Cytochrome B5 signature | 82 | 96 | IPR001199 | - | |
Cmo17g00112 | 176 | PRINTS | Cytochrome B5 signature | 97 | 104 | IPR001199 | - | |
Cmo17g00112 | 176 | SUPERFAMILY | Cytochrome b5-like heme/steroid binding domain | 47 | 128 | IPR036400 | - | |
Cmo17g00112 | 176 | Gene3D | - | 45 | 125 | IPR036400 | - | |
Cmo17g00112 | 176 | PANTHER | CYTOCHROME B5 | 43 | 174 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo14g02193 | Cmo-Chr14:15650456 | Cmo17g00112 | Cmo-Chr17:595825 | 1.28E-42 | dispersed | |
Cmo15g01073 | Cmo-Chr15:6968038 | Cmo17g00112 | Cmo-Chr17:595825 | 5.56E-61 | dispersed | |
Cmo14g01941 | Cmo-Chr14:14367871 | Cmo17g00112 | Cmo-Chr17:595825 | 9.85E-76 | wgd | |
Cmo17g00112 | Cmo-Chr17:595825 | Cmo19g00182 | Cmo-Chr19:1180756 | 1.96E-47 | wgd | |
Cmo17g00112 | Cmo-Chr17:595825 | Cmo02g01726 | Cmo-Chr2:9856432 | 9.27E-62 | wgd | |
Cmo17g00112 | Cmo-Chr17:595825 | Cmo06g01256 | Cmo-Chr6:9487661 | 3.62E-74 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo17g00112 | K23490 | - | csv:101213506 | 252.677 |