Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo17g00112 ATGCCTTCCCCTTCCCCCACATTCACGCATTTACTCGCACCCATCTCTATTTCTGCCCCGCCCGCCCTTGCTGCTGCAGCGTCCTTTTTCTTCACATTCACCCTTGTTTGCCTTGGAGATCGGCAAATGGGTGGCCACGGAAAGGTCTTTACATTGGCTGAAGTCTCTCAGCACAATACCCGCCAGGACTGTTGGTTGATCATCAATGGCAAGGTTTACAACGTAACCGAGTTCTTGGAAGACCATCCCGGTGGCGACGAGGTGTTGTTGTCTGGCACAGGTAAGGATGCAACAGATGATTTCGAAGACGTGGGTCATAGTGAGAGTGCAAGAGAAACGATGAACAAATACTATGTTGGAGACATTGACATCTCGACAATCCCTGAACGTTTGACATACACAGCTTCGAAGCAGCCTCACTACAATCAAGATAAGACGACCGAGTTCATCGTCAAGCTTCTCCAGTTCCTGGTCCCTCTCGCAATCTTGGGTCTGGCAGTTGGTATCCGCTTTTATAGCAAATCAACCTGA 531 49.53 MPSPSPTFTHLLAPISISAPPALAAAASFFFTFTLVCLGDRQMGGHGKVFTLAEVSQHNTRQDCWLIINGKVYNVTEFLEDHPGGDEVLLSGTGKDATDDFEDVGHSESARETMNKYYVGDIDISTIPERLTYTASKQPHYNQDKTTEFIVKLLQFLVPLAILGLAVGIRFYSKST 176
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 595825 598375 + CmoCh17G001120.1 Cmo17g00112 400495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo17g00112 176 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 47 123 IPR001199 -
Cmo17g00112 176 SMART Cyt_b5_2 50 123 IPR001199 -
Cmo17g00112 176 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 78 85 IPR018506 GO:0020037
Cmo17g00112 176 PANTHER BNAC04G43300D PROTEIN 43 174 - -
Cmo17g00112 176 Pfam Cytochrome b5-like Heme/Steroid binding domain 51 122 IPR001199 -
Cmo17g00112 176 PRINTS Cytochrome B5 signature 72 82 IPR001199 -
Cmo17g00112 176 PRINTS Cytochrome B5 signature 110 122 IPR001199 -
Cmo17g00112 176 PRINTS Cytochrome B5 signature 82 96 IPR001199 -
Cmo17g00112 176 PRINTS Cytochrome B5 signature 97 104 IPR001199 -
Cmo17g00112 176 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 47 128 IPR036400 -
Cmo17g00112 176 Gene3D - 45 125 IPR036400 -
Cmo17g00112 176 PANTHER CYTOCHROME B5 43 174 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo14g02193 Cmo-Chr14:15650456 Cmo17g00112 Cmo-Chr17:595825 1.28E-42 dispersed
Cmo15g01073 Cmo-Chr15:6968038 Cmo17g00112 Cmo-Chr17:595825 5.56E-61 dispersed
Cmo14g01941 Cmo-Chr14:14367871 Cmo17g00112 Cmo-Chr17:595825 9.85E-76 wgd
Cmo17g00112 Cmo-Chr17:595825 Cmo19g00182 Cmo-Chr19:1180756 1.96E-47 wgd
Cmo17g00112 Cmo-Chr17:595825 Cmo02g01726 Cmo-Chr2:9856432 9.27E-62 wgd
Cmo17g00112 Cmo-Chr17:595825 Cmo06g01256 Cmo-Chr6:9487661 3.62E-74 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo17g00112 K23490 - csv:101213506 252.677