Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo17g00144 | ATGGCCGGTGAGGTAGCGGTGGAGTGTCCTGCGGCGGCGGCGGCGGCGGCGGCGACAGAAGTAGGCGATTCCATTGAGCAGTCCCATATGTTGGAGAGAAAATGGACCTTTTGGTTCGATAACCAGTCGAGGCCGAAGCAAGGTGCTGAATGGGGCAGCTCTCTGCGCAAGGTCTATACCTTCGACACTGTTGAAGAATTTTGGTGTTTTTACGATCAGATATTGAAGCCGAGCAAGTTGCCGGCTAATGCAGATTTTCACTTGTTCAAAGCTGGAGTTGAACCGAAATGGGAAGATCCTGAGTGTGCTAATGGAGGAAAATGGACTGTCACGAGCAGTAGAAAGACTAACCTCGATACCATGTGGCTGGAAACGTTGATGGCATTGATTGGGGAACAATTTGAGGAGTCTGATGAGATCTGTGGCGTAGTTGCCAGTGTGCGCCAGAGGCGGGACAAGCTTGCACTGTGGACCAAGACAGCAGCAAATGAGGCTGCTCAGATGAGCATCGGTAGGAAATGGAAGGAGATTATCGACGTTACCGACAAGATTTCCTTCAGCTTTCATGATGATCTGAGAAGGGAAAAGTCGGCGAAATCGTCTCGGTACAGTGTCTGA | 618 | 50.65 | MAGEVAVECPAAAAAAAATEVGDSIEQSHMLERKWTFWFDNQSRPKQGAEWGSSLRKVYTFDTVEEFWCFYDQILKPSKLPANADFHLFKAGVEPKWEDPECANGGKWTVTSSRKTNLDTMWLETLMALIGEQFEESDEICGVVASVRQRRDKLALWTKTAANEAAQMSIGRKWKEIIDVTDKISFSFHDDLRREKSAKSSRYSV | 205 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
17 | 812362 | 814551 | + | CmoCh17G001440.1 | Cmo17g00144 | 400527 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo17g00144 | 205 | SUPERFAMILY | eIF4e-like | 25 | 197 | IPR023398 | - | |
Cmo17g00144 | 205 | PANTHER | BNAA08G29940D PROTEIN | 7 | 196 | - | - | |
Cmo17g00144 | 205 | Pfam | Eukaryotic initiation factor 4E | 31 | 186 | IPR001040 | GO:0003723|GO:0003743|GO:0006413 | |
Cmo17g00144 | 205 | ProSitePatterns | Eukaryotic initiation factor 4E signature. | 85 | 108 | IPR019770 | GO:0003723|GO:0003743|GO:0005737|GO:0006413 | |
Cmo17g00144 | 205 | Gene3D | RNA Cap, Translation Initiation Factor Eif4e | 20 | 205 | IPR023398 | - | |
Cmo17g00144 | 205 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATED | 7 | 196 | IPR001040 | GO:0003723|GO:0003743|GO:0006413 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cmo08g01033 | Cmo17g00144 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo13g00599 | Cmo-Chr13:6626533 | Cmo17g00144 | Cmo-Chr17:812362 | 1.46E-71 | dispersed | |
Cmo14g01118 | Cmo-Chr14:7593714 | Cmo17g00144 | Cmo-Chr17:812362 | 1.83E-28 | dispersed | |
Cmo17g00144 | Cmo-Chr17:812362 | Cmo18g00422 | Cmo-Chr18:2777211 | 1.88E-68 | dispersed | |
Cmo17g00144 | Cmo-Chr17:812362 | Cmo08g01033 | Cmo-Chr8:6716511 | 6.03E-118 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo17g00144 | K03259 | - | csv:101208495 | 360.533 |