Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo17g00144 ATGGCCGGTGAGGTAGCGGTGGAGTGTCCTGCGGCGGCGGCGGCGGCGGCGGCGACAGAAGTAGGCGATTCCATTGAGCAGTCCCATATGTTGGAGAGAAAATGGACCTTTTGGTTCGATAACCAGTCGAGGCCGAAGCAAGGTGCTGAATGGGGCAGCTCTCTGCGCAAGGTCTATACCTTCGACACTGTTGAAGAATTTTGGTGTTTTTACGATCAGATATTGAAGCCGAGCAAGTTGCCGGCTAATGCAGATTTTCACTTGTTCAAAGCTGGAGTTGAACCGAAATGGGAAGATCCTGAGTGTGCTAATGGAGGAAAATGGACTGTCACGAGCAGTAGAAAGACTAACCTCGATACCATGTGGCTGGAAACGTTGATGGCATTGATTGGGGAACAATTTGAGGAGTCTGATGAGATCTGTGGCGTAGTTGCCAGTGTGCGCCAGAGGCGGGACAAGCTTGCACTGTGGACCAAGACAGCAGCAAATGAGGCTGCTCAGATGAGCATCGGTAGGAAATGGAAGGAGATTATCGACGTTACCGACAAGATTTCCTTCAGCTTTCATGATGATCTGAGAAGGGAAAAGTCGGCGAAATCGTCTCGGTACAGTGTCTGA 618 50.65 MAGEVAVECPAAAAAAAATEVGDSIEQSHMLERKWTFWFDNQSRPKQGAEWGSSLRKVYTFDTVEEFWCFYDQILKPSKLPANADFHLFKAGVEPKWEDPECANGGKWTVTSSRKTNLDTMWLETLMALIGEQFEESDEICGVVASVRQRRDKLALWTKTAANEAAQMSIGRKWKEIIDVTDKISFSFHDDLRREKSAKSSRYSV 205
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 812362 814551 + CmoCh17G001440.1 Cmo17g00144 400527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo17g00144 205 SUPERFAMILY eIF4e-like 25 197 IPR023398 -
Cmo17g00144 205 PANTHER BNAA08G29940D PROTEIN 7 196 - -
Cmo17g00144 205 Pfam Eukaryotic initiation factor 4E 31 186 IPR001040 GO:0003723|GO:0003743|GO:0006413
Cmo17g00144 205 ProSitePatterns Eukaryotic initiation factor 4E signature. 85 108 IPR019770 GO:0003723|GO:0003743|GO:0005737|GO:0006413
Cmo17g00144 205 Gene3D RNA Cap, Translation Initiation Factor Eif4e 20 205 IPR023398 -
Cmo17g00144 205 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATED 7 196 IPR001040 GO:0003723|GO:0003743|GO:0006413
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo08g01033 Cmo17g00144 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo13g00599 Cmo-Chr13:6626533 Cmo17g00144 Cmo-Chr17:812362 1.46E-71 dispersed
Cmo14g01118 Cmo-Chr14:7593714 Cmo17g00144 Cmo-Chr17:812362 1.83E-28 dispersed
Cmo17g00144 Cmo-Chr17:812362 Cmo18g00422 Cmo-Chr18:2777211 1.88E-68 dispersed
Cmo17g00144 Cmo-Chr17:812362 Cmo08g01033 Cmo-Chr8:6716511 6.03E-118 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo17g00144 K03259 - csv:101208495 360.533