Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo17g00165 ATGAGCGAACAACTGGGAGTGCTAAGCGCACTCGATCTTGCAAAAACCCAATGGTACCATTTCACGGCAATCATCATCGCCGGAATGGGTTTCTTCACCGACGCCTACGACCTCTTCTGCATCTCCATTGTCACCAAGCTCCTTGGACGAATCTATTACCATATTCAAAACTCCCCCCGACCCGGATCTCTTCCCCCCAACGTCGCCGCCGCTGTCAACGGCGTTGCCCTCTGCGGCACCCTCGCCGGCCAACTCTTCTTCGGCTGGCTCGGCGACAAACTTGGCCGGAAAAGGGTCTACGGCATTACTCTCATTCTCATGGTCCTCTGTTCCATCGCCTCCGGCCTCTCCTTCAGCCACTCCCCTAAAGCCGTTATTTCCACCCTCTGTTTCTTCCGTTTCTGGCTCGGCTTCGGAATCGGCGGCGACTACCCTCTCTCCGCCACTATAATGTCGGAATACGCCAACAAAAAAACCCGCGGCGCATTCATCGCCGCCGTCTTCGCAATGCAGGGGTTCGGAATTTTAGCCGGAGGAATCGTTGCTTTGGTAGTCTCCGCCGCCTTCAACAACCGCTTCCCTGCACCACCCTACAGCGAAAATCCCTCCCGCCCCACAATCCCGGAGGCGGATTACGTGTGGCGAATCGTCCTAATGTTCGGCGCAATTCCGGCCGGGATAACATACTACTGGCGGATGAAAATGCCAGAGACGGCGAGATACACCGCTCTGGTGGCCCAAAACGCAAAACAAGCCGCCGCCGACATGTCAAAAGTGCTGCAAGTCCACCTCGAAGCCGAAGAAGAAAAACCCACAACCGAATCAAATCAAAATCCAAACCGTTTCGGTTTATTCTCGAAGAAATTCGCCAAACGCCATGGGCTCCACTTATTGGGGACAACCACCACCTGGTTTCTACTAGACATAGCGTTTTACAGCCAAAACCTCTTCCAAAAAGACATTTTCACCGCCATCGAATGGCTTCCACCGGCGGCGACAATGAGCGAATTAGAAGAATGTTTCAAAATCGCACGCGCACAGACACTAATTGCCCTGTGCGGGACGGTTCCGGGGTACTGGTTCACGGTGGTGTTCATCGATTACATAGGGAGATTCGTGATTCAATTGATGGGGTTCATAATGATGACGATTTTCATGTTTGCTCTGGCTTTTCCGTACAATCATTGGAAGGAGAAGCCGCACAGAATTGGGTTTGTGGTGATGTATTCGTTGACGTTTTTCTTTGCGAATTTTGGGCCGAATTCGACGACGTTTATAGTGCCGGCGGAGATATTTCCGGCGAGGTTGAGGTCGACTTGCCATGGGATATCGGCGGCGGCGGGGAAGGCAGGGGCGATAGTGGGGGCGTTTGGGTTTTTGTATGCGGCGCAGAGTAAGGATCCGGCGATGACGGAGCCGGGGTACCCGACGGGGATCGGCGTTAAGAATGCTTTGATTGTGTTGGGATGCATTAATTTCTTGGGAGCTTTGTTTACTCTGTTAGTGCCGGAATCCAAAGGCAAATCTCTGGAGGAGTTGACCGGGGAGAACCAAGGGGATGACGATGGAATTGGAACTTCCCCTGTCTGA 1590 53.08 MSEQLGVLSALDLAKTQWYHFTAIIIAGMGFFTDAYDLFCISIVTKLLGRIYYHIQNSPRPGSLPPNVAAAVNGVALCGTLAGQLFFGWLGDKLGRKRVYGITLILMVLCSIASGLSFSHSPKAVISTLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIVALVVSAAFNNRFPAPPYSENPSRPTIPEADYVWRIVLMFGAIPAGITYYWRMKMPETARYTALVAQNAKQAAADMSKVLQVHLEAEEEKPTTESNQNPNRFGLFSKKFAKRHGLHLLGTTTTWFLLDIAFYSQNLFQKDIFTAIEWLPPAATMSELEECFKIARAQTLIALCGTVPGYWFTVVFIDYIGRFVIQLMGFIMMTIFMFALAFPYNHWKEKPHRIGFVVMYSLTFFFANFGPNSTTFIVPAEIFPARLRSTCHGISAAAGKAGAIVGAFGFLYAAQSKDPAMTEPGYPTGIGVKNALIVLGCINFLGALFTLLVPESKGKSLEELTGENQGDDDGIGTSPV 529
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 963739 965328 - CmoCh17G001650.1 Cmo17g00165 400548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo17g00165 529 CDD MFS_PhT 24 506 - -
Cmo17g00165 529 SUPERFAMILY MFS general substrate transporter 11 513 IPR036259 -
Cmo17g00165 529 ProSiteProfiles Major facilitator superfamily (MFS) profile. 23 507 IPR020846 GO:0022857
Cmo17g00165 529 Pfam Sugar (and other) transporter 25 513 IPR005828 GO:0016021|GO:0022857|GO:0055085
Cmo17g00165 529 Gene3D MFS general substrate transporter like domains 19 265 IPR036259 -
Cmo17g00165 529 Gene3D MFS general substrate transporter like domains 273 526 IPR036259 -
Cmo17g00165 529 TIGRFAM 2A0109: phosphate:H+ symporter 11 516 IPR004738 GO:0005315|GO:0006817|GO:0016021
Cmo17g00165 529 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 1 523 - -
Cmo17g00165 529 PANTHER INORGANIC PHOSPHATE TRANSPORTER 1-4-LIKE 1 523 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo14g01847 Cmo17g00165 CCT
Cmo06g01332 Cmo17g00165 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo09g00029 Cmo-Chr9:139751 Cmo17g00165 Cmo-Chr17:963739 0 dispersed
Cmo14g01849 Cmo-Chr14:13972822 Cmo17g00165 Cmo-Chr17:963739 0 dispersed
Cmo16g00079 Cmo-Chr16:368539 Cmo17g00165 Cmo-Chr17:963739 0 dispersed
Cmo17g00165 Cmo-Chr17:963739 Cmo19g00099 Cmo-Chr19:556665 0 dispersed
Cmo14g01847 Cmo-Chr14:13968135 Cmo17g00165 Cmo-Chr17:963739 0 wgd
Cmo17g00165 Cmo-Chr17:963739 Cmo19g00098 Cmo-Chr19:552994 0 wgd
Cmo17g00165 Cmo-Chr17:963739 Cmo02g01793 Cmo-Chr2:10195085 0 wgd
Cmo17g00165 Cmo-Chr17:963739 Cmo06g01332 Cmo-Chr6:9921850 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo17g00165 K08176 - csv:101212412 934.48