Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo17g00165 | ATGAGCGAACAACTGGGAGTGCTAAGCGCACTCGATCTTGCAAAAACCCAATGGTACCATTTCACGGCAATCATCATCGCCGGAATGGGTTTCTTCACCGACGCCTACGACCTCTTCTGCATCTCCATTGTCACCAAGCTCCTTGGACGAATCTATTACCATATTCAAAACTCCCCCCGACCCGGATCTCTTCCCCCCAACGTCGCCGCCGCTGTCAACGGCGTTGCCCTCTGCGGCACCCTCGCCGGCCAACTCTTCTTCGGCTGGCTCGGCGACAAACTTGGCCGGAAAAGGGTCTACGGCATTACTCTCATTCTCATGGTCCTCTGTTCCATCGCCTCCGGCCTCTCCTTCAGCCACTCCCCTAAAGCCGTTATTTCCACCCTCTGTTTCTTCCGTTTCTGGCTCGGCTTCGGAATCGGCGGCGACTACCCTCTCTCCGCCACTATAATGTCGGAATACGCCAACAAAAAAACCCGCGGCGCATTCATCGCCGCCGTCTTCGCAATGCAGGGGTTCGGAATTTTAGCCGGAGGAATCGTTGCTTTGGTAGTCTCCGCCGCCTTCAACAACCGCTTCCCTGCACCACCCTACAGCGAAAATCCCTCCCGCCCCACAATCCCGGAGGCGGATTACGTGTGGCGAATCGTCCTAATGTTCGGCGCAATTCCGGCCGGGATAACATACTACTGGCGGATGAAAATGCCAGAGACGGCGAGATACACCGCTCTGGTGGCCCAAAACGCAAAACAAGCCGCCGCCGACATGTCAAAAGTGCTGCAAGTCCACCTCGAAGCCGAAGAAGAAAAACCCACAACCGAATCAAATCAAAATCCAAACCGTTTCGGTTTATTCTCGAAGAAATTCGCCAAACGCCATGGGCTCCACTTATTGGGGACAACCACCACCTGGTTTCTACTAGACATAGCGTTTTACAGCCAAAACCTCTTCCAAAAAGACATTTTCACCGCCATCGAATGGCTTCCACCGGCGGCGACAATGAGCGAATTAGAAGAATGTTTCAAAATCGCACGCGCACAGACACTAATTGCCCTGTGCGGGACGGTTCCGGGGTACTGGTTCACGGTGGTGTTCATCGATTACATAGGGAGATTCGTGATTCAATTGATGGGGTTCATAATGATGACGATTTTCATGTTTGCTCTGGCTTTTCCGTACAATCATTGGAAGGAGAAGCCGCACAGAATTGGGTTTGTGGTGATGTATTCGTTGACGTTTTTCTTTGCGAATTTTGGGCCGAATTCGACGACGTTTATAGTGCCGGCGGAGATATTTCCGGCGAGGTTGAGGTCGACTTGCCATGGGATATCGGCGGCGGCGGGGAAGGCAGGGGCGATAGTGGGGGCGTTTGGGTTTTTGTATGCGGCGCAGAGTAAGGATCCGGCGATGACGGAGCCGGGGTACCCGACGGGGATCGGCGTTAAGAATGCTTTGATTGTGTTGGGATGCATTAATTTCTTGGGAGCTTTGTTTACTCTGTTAGTGCCGGAATCCAAAGGCAAATCTCTGGAGGAGTTGACCGGGGAGAACCAAGGGGATGACGATGGAATTGGAACTTCCCCTGTCTGA | 1590 | 53.08 | MSEQLGVLSALDLAKTQWYHFTAIIIAGMGFFTDAYDLFCISIVTKLLGRIYYHIQNSPRPGSLPPNVAAAVNGVALCGTLAGQLFFGWLGDKLGRKRVYGITLILMVLCSIASGLSFSHSPKAVISTLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIVALVVSAAFNNRFPAPPYSENPSRPTIPEADYVWRIVLMFGAIPAGITYYWRMKMPETARYTALVAQNAKQAAADMSKVLQVHLEAEEEKPTTESNQNPNRFGLFSKKFAKRHGLHLLGTTTTWFLLDIAFYSQNLFQKDIFTAIEWLPPAATMSELEECFKIARAQTLIALCGTVPGYWFTVVFIDYIGRFVIQLMGFIMMTIFMFALAFPYNHWKEKPHRIGFVVMYSLTFFFANFGPNSTTFIVPAEIFPARLRSTCHGISAAAGKAGAIVGAFGFLYAAQSKDPAMTEPGYPTGIGVKNALIVLGCINFLGALFTLLVPESKGKSLEELTGENQGDDDGIGTSPV | 529 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
17 | 963739 | 965328 | - | CmoCh17G001650.1 | Cmo17g00165 | 400548 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo17g00165 | 529 | CDD | MFS_PhT | 24 | 506 | - | - | |
Cmo17g00165 | 529 | SUPERFAMILY | MFS general substrate transporter | 11 | 513 | IPR036259 | - | |
Cmo17g00165 | 529 | ProSiteProfiles | Major facilitator superfamily (MFS) profile. | 23 | 507 | IPR020846 | GO:0022857 | |
Cmo17g00165 | 529 | Pfam | Sugar (and other) transporter | 25 | 513 | IPR005828 | GO:0016021|GO:0022857|GO:0055085 | |
Cmo17g00165 | 529 | Gene3D | MFS general substrate transporter like domains | 19 | 265 | IPR036259 | - | |
Cmo17g00165 | 529 | Gene3D | MFS general substrate transporter like domains | 273 | 526 | IPR036259 | - | |
Cmo17g00165 | 529 | TIGRFAM | 2A0109: phosphate:H+ symporter | 11 | 516 | IPR004738 | GO:0005315|GO:0006817|GO:0016021 | |
Cmo17g00165 | 529 | PANTHER | SOLUTE CARRIER FAMILY 22 MEMBER | 1 | 523 | - | - | |
Cmo17g00165 | 529 | PANTHER | INORGANIC PHOSPHATE TRANSPORTER 1-4-LIKE | 1 | 523 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cmo14g01847 | Cmo17g00165 | CCT | |
Cmo06g01332 | Cmo17g00165 | CCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo09g00029 | Cmo-Chr9:139751 | Cmo17g00165 | Cmo-Chr17:963739 | 0 | dispersed | |
Cmo14g01849 | Cmo-Chr14:13972822 | Cmo17g00165 | Cmo-Chr17:963739 | 0 | dispersed | |
Cmo16g00079 | Cmo-Chr16:368539 | Cmo17g00165 | Cmo-Chr17:963739 | 0 | dispersed | |
Cmo17g00165 | Cmo-Chr17:963739 | Cmo19g00099 | Cmo-Chr19:556665 | 0 | dispersed | |
Cmo14g01847 | Cmo-Chr14:13968135 | Cmo17g00165 | Cmo-Chr17:963739 | 0 | wgd | |
Cmo17g00165 | Cmo-Chr17:963739 | Cmo19g00098 | Cmo-Chr19:552994 | 0 | wgd | |
Cmo17g00165 | Cmo-Chr17:963739 | Cmo02g01793 | Cmo-Chr2:10195085 | 0 | wgd | |
Cmo17g00165 | Cmo-Chr17:963739 | Cmo06g01332 | Cmo-Chr6:9921850 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo17g00165 | K08176 | - | csv:101212412 | 934.48 |