Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo17g00265 | ATGAAAATCAGAGAGCAATATCGTGCGAAGGTAGAAGGCCTACAAAAAAGGTACAATAATTATCGTATAACTAGCAAGGTCCTCCACCGAGCACTGTGTACATTAAAAAATGCGAAATTGATTGGTGTTTGGATGTGCATTTGGAACACGATTACTTGTATATCACGGTTTCGTTCGTCTATAGACGTGGATTTCTTCACTGAATATGGTGAAGGGAGCAGGTATAGAATAGAGGAAGTAATTGGTAAAGGAAGTTATGGTGTTGTGTGCTCTGCATATGATACTCACATTGGGGAGAAAGTTGCAATTAAGAAGATCAACGACATCTTTGAGCATGTCTCCGATGCAACTCGGATTCTTCGTGAGATAAAACTTTTAAGACTATTGAGACATCCAGACATTGTGGAGATAAAGCACATCCTATTACCTCCATCTAGAAGAGAATTCAAGGACATTTATGTCGTGTTTGAGCTCATGGAATCTGATCTACACCAAGTTATCAAAGCAAACGATGATTTGACTCCAGAACATTATCAGTTCTTTCTTTACCAGCTTCTTCGAGGCTTGAAATATATACACACAGCTAATGTCTTCCACCGGGACCTAAAACCCAAAAATATCTTAGCAAATGCTGACTGCAAACTCAAGATCTGCGACTTTGGTCTGGCAAGAGTTGCTTTTAATGACACCCCTACTGCTATTTTCTGGACAGATTATGTAGCAACAAGGTGGTACAGAGCTCCTGAACTGTGTGGTTCCTTTTTCTCAAAGTATACACCAGCAATAGATATATGGAGCATTGGTTGCATCTTTGCGGAGCTTTTAACTGGAAAACCAATTTTCCCTGGAAAGAACGTCGTCCACCAATTAGACTTGATGACAGATTTTCTGGGAACCCCAAATGCAGAAGCCATTGCCAGGGTACGAAATGAGAAAGCTCGGAGATACTTGAGCAGTATGCGAAAGAAGAAGCCAGTTCCTTTCTCCCAGAAGTTTCCTCACGCAGATCCACTCGCACTTCGCTTGTTGGAAAGAATGTTAGCTTTCGAGCCAAAGGATCGACCTACAGCAGAGGAGGCCCTTGCAGATCCATATTTTAAAGGCTTAGCGAAGGTTGAGAGAGAGCCATCTGCTCAACCTGTAACTAAGATGGAATTTGAATTTGAGAGACGAAGGATAACCAAAGAAGATGTTAGGGAGCTTATTTACCGGGAGATTCTCGAGTACCATCCAAAGATGTTGAAGGAATTCTTAGATGGATCTGAACCTACTGGTTTCATGTATCCAAGGGCTTTTAATGCTGTTGACCATTTTAAGAAGCAATTTGCCTTCCTTGAAGAACACTATGGAAATGGTGCAACTGTTGCTCCTCCTGAAAGGCAGCATGCATCCTTGCCTAGGCCATGTGTTTTATATTCAGATAACACGGTGCAGAACTCGGCACAAGTTGCAAATGACCTATCCAAATGTTCCATCAAAGAAGTTGAGAGGCCACAAGTGGATAGGACTTGCAATATTCCTTTGACTAGAGTTCCTATTCAAGTTCCTCAGTCTATTCAAGGCAATGGTGCAAGGCCTGGAAAAGTTGTTGGCAACGTGTTACGATACAACTGCGGAGCAACAGCAGCAGCAGCAGTGGCACCAGAAGTTCTGGAACAGCGGAGGATGATCAGAAACCCGTCCATTCCACCACCATACGCCGCTACTAACTGTTCGTATCCCAGACGAAACCCATCCTGTAAAAATGAAAGGACTGATGATGAAGCCATTGAAGGTTCAAATGGGTTGCAGCCAAAACCTCAGTACATAGCTAGAAAAGTTGCTGCTGCCCAAGGTGGACCAGGAAATAACTGGTATAAGTTACAAAAGTTGACTAATCCCAATCCACTAAGATTGCTGTTTGAAGATATTTGGAACCTGAAAATCGAAACCTTAATCAGTAGCTGA | 1947 | 42.42 | MKIREQYRAKVEGLQKRYNNYRITSKVLHRALCTLKNAKLIGVWMCIWNTITCISRFRSSIDVDFFTEYGEGSRYRIEEVIGKGSYGVVCSAYDTHIGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPIFPGKNVVHQLDLMTDFLGTPNAEAIARVRNEKARRYLSSMRKKKPVPFSQKFPHADPLALRLLERMLAFEPKDRPTAEEALADPYFKGLAKVEREPSAQPVTKMEFEFERRRITKEDVRELIYREILEYHPKMLKEFLDGSEPTGFMYPRAFNAVDHFKKQFAFLEEHYGNGATVAPPERQHASLPRPCVLYSDNTVQNSAQVANDLSKCSIKEVERPQVDRTCNIPLTRVPIQVPQSIQGNGARPGKVVGNVLRYNCGATAAAAVAPEVLEQRRMIRNPSIPPPYAATNCSYPRRNPSCKNERTDDEAIEGSNGLQPKPQYIARKVAAAQGGPGNNWYKLQKLTNPNPLRLLFEDIWNLKIETLISS | 648 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
17 | 1582906 | 1590155 | + | CmoCh17G002650.1 | Cmo17g00265 | 400648 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo17g00265 | 648 | ProSitePatterns | Protein kinases ATP-binding region signature. | 81 | 105 | IPR017441 | GO:0005524 | |
Cmo17g00265 | 648 | Pfam | Protein kinase domain | 75 | 366 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cmo17g00265 | 648 | ProSiteProfiles | Protein kinase domain profile. | 75 | 366 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cmo17g00265 | 648 | Coils | Coil | 4 | 24 | - | - | |
Cmo17g00265 | 648 | MobiDBLite | consensus disorder prediction | 561 | 597 | - | - | |
Cmo17g00265 | 648 | PANTHER | MITOGEN-ACTIVATED PROTEIN KINASE | 59 | 532 | - | - | |
Cmo17g00265 | 648 | Gene3D | Phosphorylase Kinase; domain 1 | 90 | 411 | - | - | |
Cmo17g00265 | 648 | PANTHER | MITOGEN-ACTIVATED PROTEIN KINASE | 59 | 532 | - | - | |
Cmo17g00265 | 648 | CDD | STKc_TDY_MAPK | 74 | 411 | - | - | |
Cmo17g00265 | 648 | ProSitePatterns | MAP kinase signature. | 110 | 213 | IPR003527 | GO:0004707|GO:0005524|GO:0006468 | |
Cmo17g00265 | 648 | SMART | serkin_6 | 75 | 366 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cmo17g00265 | 648 | Gene3D | Transferase(Phosphotransferase) domain 1 | 161 | 389 | - | - | |
Cmo17g00265 | 648 | SUPERFAMILY | Protein kinase-like (PK-like) | 72 | 370 | IPR011009 | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cmo08g01148 | Cmo17g00265 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo11g00311 | Cmo-Chr11:1499676 | Cmo17g00265 | Cmo-Chr17:1582906 | 0 | dispersed | |
Cmo11g02038 | Cmo-Chr11:13860920 | Cmo17g00265 | Cmo-Chr17:1582906 | 0 | dispersed | |
Cmo13g01034 | Cmo-Chr13:8708506 | Cmo17g00265 | Cmo-Chr17:1582906 | 0 | dispersed | |
Cmo17g00265 | Cmo-Chr17:1582906 | Cmo19g01097 | Cmo-Chr19:9403201 | 0 | dispersed | |
Cmo17g00265 | Cmo-Chr17:1582906 | Cmo08g01148 | Cmo-Chr8:7341665 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
74995 | PF00069 | Pkinase | 3.80E-67 | CL0016 | Cmo | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo17g00265 | - | K04371 | csv:101216364 | 1081.63 |