Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo17g00356 ATGGCATTTTGGTGGACTCTGCTTGTAATAGGATTTGCTTACGCGATCTGTAGGTTACTCTTGATGCTCATCCCTCCGAATGTGCCTTCAATCGAAGTTGACGCATCTGATGTGATGGACGACGGTAATCAGACGCAGGAGAATAGCTACATCTACATTCCACCTAGAGTAAGGACACAGCAGCAAGACAAGCGAGTCCAATGTTACGAGCCTGCAACTATGAAATACCTGGGCTATTTTCCTGCATTGTCACGAGACGAGGTCAATGATCGTGTTGCTTCAGCCAGGAAAGCACAGAAAGAATGGGCCAAAAGTAGCTTTAAGCAAAGGCGTTTGCTCTTACGCATACTTTTGAAGTATATAATTGAACATCAAGAGCTTATTTGCGAGATCTCCTCCCGTGACACTGGAAAGACAATAGTGGATGCTAATATGGGAGAAATAATGGCAACATGTGAAAAGATTACTTGGCTTCTTTCAGAGGGTGAGAAATGGCTGAAGCCTGAGAGCAGATCATGTGGAAGGGCAACACTTCACAAGAAAGCTCGCGTAGAATTTCATCCCCTTGGAGTTATTGGTGCAATAGTCCCATGGAACTATCCATTTCATAACATTTTCAATCCAGTGCTTGCGGCAGTTTTTGCAGGAAATGGCATTGTAGTTAAGGTTTCAGAACATGCAAGTTGGTCAGGATGCTTCTATGTCAGGATTATCCAAGCTGCACTTGCTGCTGTTGGAGCTCCTGAGAGTTTGGTCGATGTGATAACAGGGTTTGCTGAAACAGGTGAAGCTCTAGTATCTTCAGTAGACAAAATGATATTCGTTGGATCTACTGGTGTGGGTAGGATGATAATGAAAAGTGCTGCTGAGACACTCATTCCAGTTACTCTTGAGTTGGGTGGAAAGGACGCATTTATCGTGTGTGAGGATGTAGATCTTGATCATGTTGTAAACGTTGCTCTCAGGGCTTCTATTACATCAAGTGGACATAATTGTACTGGAGCTGAGAGATTTTATGTCCACAAGAACATTTATTCTTCGTTTGTGGATAAAATATCAGAACGTGTAAAGGCTATTACAGTTGGTCCACCATTAGCTGGGAAGTATGATATGGGTGCCATCTGTACGCAAGAGCAGTCTGAGAAACTTCAAAGCCTCGTAAATGATGCCTTAGACAGGGGGGCAAAAATTGTTGCTCGTGGAACTTTCGGACATTTACCTGAAGGTGCCGTTGATCAATATTTTCCACCTACCGTTATTGTTGACGTCAACCATACCATGAAATTAATGCAAGAGGAGGCATTTGGACCAATCCTGCCCATAATGAAATTCAGCACAGATGATGAGGCCGTGAGGCTTGCAAATGATTCAAGATTTGGGCTCGGCTGTGCTGTCTTTTCTGGCAGTCAGCGTCGTGCCAAGAATATTGCTTCGCAGATACGTTCTGGAAGTGTTGCAATTAATGACTTCGCCACAAATTATTTATGTCAGTCCTTGCCATTCGGTGGCGTGAAAGAGAGTGGATTCGGTCGATTTGCGGGCGTTGAAGGATTACGAGCTTGTTGTCTCGTCAAAGCAGTTGTTGAAGATAGGTGGTGGCCATACATTCAGACTAAGCATCCTAAGCCTCTTACGTATCCTGTGGCAGACAATGCTTTCGAGTTTCAAATGTCGCTCGTTGAAGCAACGTACGGGCTGAACATATGGGATCGATTGAGAGCATTGGTCAATGTCCTAAAGATGCTTTCCGAGCAGAACACTCCGGCTAAAGACAACTCTGCCGTTGATGATGGAAGTAAGAGAGCTGATTGA 1812 44.26 MAFWWTLLVIGFAYAICRLLLMLIPPNVPSIEVDASDVMDDGNQTQENSYIYIPPRVRTQQQDKRVQCYEPATMKYLGYFPALSRDEVNDRVASARKAQKEWAKSSFKQRRLLLRILLKYIIEHQELICEISSRDTGKTIVDANMGEIMATCEKITWLLSEGEKWLKPESRSCGRATLHKKARVEFHPLGVIGAIVPWNYPFHNIFNPVLAAVFAGNGIVVKVSEHASWSGCFYVRIIQAALAAVGAPESLVDVITGFAETGEALVSSVDKMIFVGSTGVGRMIMKSAAETLIPVTLELGGKDAFIVCEDVDLDHVVNVALRASITSSGHNCTGAERFYVHKNIYSSFVDKISERVKAITVGPPLAGKYDMGAICTQEQSEKLQSLVNDALDRGAKIVARGTFGHLPEGAVDQYFPPTVIVDVNHTMKLMQEEAFGPILPIMKFSTDDEAVRLANDSRFGLGCAVFSGSQRRAKNIASQIRSGSVAINDFATNYLCQSLPFGGVKESGFGRFAGVEGLRACCLVKAVVEDRWWPYIQTKHPKPLTYPVADNAFEFQMSLVEATYGLNIWDRLRALVNVLKMLSEQNTPAKDNSAVDDGSKRAD 603
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 2168133 2177392 - CmoCh17G003560.1 Cmo17g00356 400739
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo17g00356 603 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 297 304 IPR029510 GO:0016491
Cmo17g00356 603 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 305 500 IPR016163 GO:0016620
Cmo17g00356 603 PANTHER ALDEHYDE DEHYDROGENASE-LIKE PROTEIN YHR039C-RELATED 1 562 - -
Cmo17g00356 603 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 1 562 - -
Cmo17g00356 603 Pfam Aldehyde dehydrogenase family 61 527 IPR015590 GO:0016491
Cmo17g00356 603 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 65 525 IPR016162 GO:0016491
Cmo17g00356 603 SUPERFAMILY ALDH-like 49 529 IPR016161 GO:0016491
Cmo17g00356 603 CDD ALDH_F15-22 69 531 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo08g01242 Cmo17g00356 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo16g00705 Cmo-Chr16:3511971 Cmo17g00356 Cmo-Chr17:2168133 7.21E-45 dispersed
Cmo17g00356 Cmo-Chr17:2168133 Cmo20g00311 Cmo-Chr20:1515459 1.66E-62 dispersed
Cmo17g00356 Cmo-Chr17:2168133 Cmo08g01242 Cmo-Chr8:7855275 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo17g00356 - - csv:101209796 1132.86