Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo17g00415 ATGGACGTGGGTTTGGGTTTGGTTATTGTAATGGCGGTGACGGCGTATCTTCTGTGGTTTACGTTCATTTCCCGGTCGTTGAAAGGGCCTCAAATGTGGCCGTTGCTCGGCAGCTTGCCGGGGTTGATAGAGAATTGCGACCGTTTACACGACTGGATCTCCGACAACCTCCGTGCTTGCGGCGGCACTTATCAAACATGCATTTGGGCCTTCCCTTTCTTCGCAACAAAACAGGGCCTCGTGACTGTCACGTGCGACCCGAGAAATCTGGAGCATATACTCAAGACCCGATTCGATAATTACCCTAAGGGCCCCACTTGGCAAGCTGTATTTCACGAGTTACTTGGCCAAGGTATTTTTAATTCTGATGGTGACACGTGGCTCTTCCAGAGAAAAACTGCTGCCTTGGAATTTACTACTAGGACCCTTCGTCAAGCCATGGCTCGATGGGTTAGCCGAGCTATTAAGTTGAGGTTTTGTCCTATTCTTAAACAAGCCGAGCTTAATTCTCAGCCGATTGATCTTCAGGATGTGTTGTTGCGGCTTACTTTTGATAATATTTGCGGCTTGGCTTTTGGGAAAGATCCTATGACTTGCGCGCCGGGTTTCCCTGAAAATGGCTTTGCTATGGCTTTTGATCGAGCCACTGAAGCTTCGTTGCAACGGTTTATTTTGCCGGAGGTTCTTTGGAAATTTAAAAAGTGGCTTCGGCTTGGTATGGAAGTCAGCTTGAGCCGGAGTCTCGTTCATATCGAGGAGTATTTATCCAGTGTTATTGATTCACGTAAGCTCGAGTTGCTGAATCAGCTTAAAGACTCGACCCCACATGATGATTTATTGTCACGTTTCATGAAGAAGAAGGAAAGTAATTACTCCAACGCGTTTCTTCGCCATGTGGCGCTTAATTTCATCCTAGCTGGACGGGACACGTCATCCGTTGCTCTGAGCTGGTTCTTCTGGTTGGTTACATTAAACCCACAAATTGAAGAAAAAATCCTCCGCGAGATCTGCACCGTTCTGATTGAGACACGTGGCAATAACATTCAATCATGGCTGGATGAGCCGTTAGGATTTGAAGAGATCGACCGTCTGATTTATCTCAAAGCCGCTCTCACCGAAACCCTTAGACTGTACCCGTCGGTGCCGGAGGATTCAAAGCACGTCGTCGCCGACGACATTCTTCCCGACGGAACCTTCGTTCCGGCGGGATCGTCGGTGACTTATTCAATTTATTCCACCGGAAGAATGAAGTCGACGTGGGGAGAAGACTGCCTCGAATTCCGGCCGGAGCGGTGGCTGACGGCGGACGGGAAGAAATTCATACCATACGATCCGTACAAATTCGTAGCGTTCAATGCAGGGCCAAGGATCTGCTTGGGGAAGGATTTGGCGTATTTACAGATGAAGTCGATAGCGGCGGCGGTACTTCTCCGACACCGGCTGACGGTGGCGGCAGGGCATAAGGTGGAGCAGAAAATGTCGTTGACGCTGTTTATGAAGTACGGGCTGAAGGTGAACGTTCACCGGAGGGAGTTGGAAGGAATAGTGGAAAGCATAAGGGGCAAAAACGGAAATTCACAAGGGAATGATACTCCGTTAGTCGCCGTTGTGAACTGTAACGGCGGGTGTAACGGTTTTAACGACGTACAACGCTAA 1656 49.09 MDVGLGLVIVMAVTAYLLWFTFISRSLKGPQMWPLLGSLPGLIENCDRLHDWISDNLRACGGTYQTCIWAFPFFATKQGLVTVTCDPRNLEHILKTRFDNYPKGPTWQAVFHELLGQGIFNSDGDTWLFQRKTAALEFTTRTLRQAMARWVSRAIKLRFCPILKQAELNSQPIDLQDVLLRLTFDNICGLAFGKDPMTCAPGFPENGFAMAFDRATEASLQRFILPEVLWKFKKWLRLGMEVSLSRSLVHIEEYLSSVIDSRKLELLNQLKDSTPHDDLLSRFMKKKESNYSNAFLRHVALNFILAGRDTSSVALSWFFWLVTLNPQIEEKILREICTVLIETRGNNIQSWLDEPLGFEEIDRLIYLKAALTETLRLYPSVPEDSKHVVADDILPDGTFVPAGSSVTYSIYSTGRMKSTWGEDCLEFRPERWLTADGKKFIPYDPYKFVAFNAGPRICLGKDLAYLQMKSIAAAVLLRHRLTVAAGHKVEQKMSLTLFMKYGLKVNVHRRELEGIVESIRGKNGNSQGNDTPLVAVVNCNGGCNGFNDVQR 551
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 2771360 2773015 - CmoCh17G004150.1 Cmo17g00415 400798
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo17g00415 551 PANTHER CYTOCHROME P450 7 523 - -
Cmo17g00415 551 Pfam Cytochrome P450 28 497 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo17g00415 551 PANTHER CYTOCHROME P450 86A2 7 523 - -
Cmo17g00415 551 PRINTS E-class P450 group I signature 295 312 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo17g00415 551 PRINTS E-class P450 group I signature 315 341 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo17g00415 551 PRINTS E-class P450 group I signature 368 386 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo17g00415 551 PRINTS E-class P450 group I signature 448 458 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo17g00415 551 PRINTS E-class P450 group I signature 458 481 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo17g00415 551 Gene3D Cytochrome P450 24 513 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo17g00415 551 SUPERFAMILY Cytochrome P450 21 510 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo17g00415 551 PRINTS P450 superfamily signature 306 323 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo17g00415 551 PRINTS P450 superfamily signature 369 380 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo17g00415 551 PRINTS P450 superfamily signature 449 458 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo17g00415 551 PRINTS P450 superfamily signature 458 469 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo17g00415 551 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 451 460 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo01g00687 Cmo-Chr1:3503986 Cmo17g00415 Cmo-Chr17:2771360 0 dispersed
Cmo17g00415 Cmo-Chr17:2771360 Cmo17g00955 Cmo-Chr17:8434822 3.19E-150 dispersed
Cmo15g01299 Cmo-Chr15:8915667 Cmo17g00415 Cmo-Chr17:2771360 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo17g00415 K15398 - csv:101221526 1066.22