Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo17g00416 ATGTCTAAAGAAGAAAGCTCGAAATCTAACAGAAGGACAACCCGGTCCTCGGCAGCGGCTGTTCTAAGGGATTCTGGTGAAACTAAGAAGACATATCATCCACATATTCCAACTCTTAATGATCTTGTTTTTGGAGAAGATACCATTAGTAAGGAAGATCTCCTATCTAGTTTTCCTGGACGTCATACTCAAATTCTTGAACTCCTTAACCTTTTAGGTCCCCTGAATTCTCCCATGCTTCCCCTCTTTGTTTATGGTGGCACGTCATCGGGAAAAACCAGTGTCATTCTACAGACATTCCGTCATCTCAACCGTCCTTTTGTCTATTCTAGCTGTCGCACTTGTTATAATTTACGAACTCTATTTGAGTCTATCTTGAATCAGTTATTACTTCATCAAAAAGATGCAGGCAGTGGATATTTGAGTGCAAAGCGCTGTGAAAAGCCATCAGATTTCGTTAACTTTCTTCGTGAAGCCTTGGTTAAAGTCGTAAATACTCTTCAGGGAAACCCAGGAAAGCTAAGCACCAAGAAGTTGACAGGACAAGGGCATGGACATATGATCTACCTGATTTTCGACAACTTGGAACTCGTTAGAAACTGGGACAAGAGTTCAAGCATACTGCCTTTTCTATTTAATCTCCATGAAGTTTTAAACATGAATGAGGTTGGATTTCTCTTCATCAGTAATACTTCACCTGACACATACTATTCAAATGTGGGTTACTTGGAGCCCATCCCTGTTTATTTCTCTGAGTACACAGAAGACGATCTTCGTCAAATTCTTTCGAGGAATCAAACTAATCAAGAGATGTATTCATCCTTTCTGAGTATTGTATTGGGGCCATTCTGTAGAATTACTAGGCAAGTGAATGAGTTATCCATAGCCTTTTCATCATTGTATAAAACGTACCGTGAAGCTTCGGGTGATCTGAACAATGTTCCCAATGAGTCCAGCAAGAGGGCACGTTTCAGTCATTTTCAGCCACATATTGCCCCTGCTTTGAATCAGATATTTAAAATTTCATCTCAGCCTTCTGAACTTAATAATTTAAAGGAACCAAAGAGAAAAGGTGGCAGTAAGAAACTTGGTGGGTTTGACTCTTCTGAGGACTTGGACTTTCACATGTCTACTTCTGCAAAATATCTTCTTCTTTCAGCTTTTCTTGCTTCAAGAAATCCAGCTACACTTGATGCATCACTGTTTGATTCTACTGGGGGCGCTAGTAGTCGAAAAAGGAAGAAGAGGCCATCTGAAAAGGCAATTGAGCAGAAGGAAATTTCAGAACAGGAGCTGCTAATGAAAGGACCTGGAACTTTTCCATTGGAGAGATTGCTTGCAATATTTCAGTGCATTACGTCTGTTGCAGAAACCTCGCTCGAAGATGTGCAAGATGTTGTAATGGATAGTCGAAATGAGGATAGCGAACTCATGTCTGATGTTCTCCTGCAACTTTCCAGCCTCTGCAATGCAAACTTTGTGGTCAAAGGAGGAAGTTGCCCACTAGAAGGTTCTACACGATATCGCTCTACAGTGTCTGAAGATATGGCTTCGAAGGTAATATTCTCCGATAACGCCTTCTTTGGTTTTGAGTATTAG 1599 40.78 MSKEESSKSNRRTTRSSAAAVLRDSGETKKTYHPHIPTLNDLVFGEDTISKEDLLSSFPGRHTQILELLNLLGPLNSPMLPLFVYGGTSSGKTSVILQTFRHLNRPFVYSSCRTCYNLRTLFESILNQLLLHQKDAGSGYLSAKRCEKPSDFVNFLREALVKVVNTLQGNPGKLSTKKLTGQGHGHMIYLIFDNLELVRNWDKSSSILPFLFNLHEVLNMNEVGFLFISNTSPDTYYSNVGYLEPIPVYFSEYTEDDLRQILSRNQTNQEMYSSFLSIVLGPFCRITRQVNELSIAFSSLYKTYREASGDLNNVPNESSKRARFSHFQPHIAPALNQIFKISSQPSELNNLKEPKRKGGSKKLGGFDSSEDLDFHMSTSAKYLLLSAFLASRNPATLDASLFDSTGGASSRKRKKRPSEKAIEQKEISEQELLMKGPGTFPLERLLAIFQCITSVAETSLEDVQDVVMDSRNEDSELMSDVLLQLSSLCNANFVVKGGSCPLEGSTRYRSTVSEDMASKVIFSDNAFFGFEY 532
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
17 2781143 2786340 - CmoCh17G004160.1 Cmo17g00416 400799
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo17g00416 532 Pfam Origin recognition complex (ORC) subunit 5 C-terminus 248 520 IPR020796 GO:0000808|GO:0005634|GO:0006260
Cmo17g00416 532 MobiDBLite consensus disorder prediction 408 423 - -
Cmo17g00416 532 PANTHER ORIGIN RECOGNITION COMPLEX SUBUNIT 5 51 520 IPR020796 GO:0000808|GO:0005634|GO:0006260
Cmo17g00416 532 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 52 274 IPR027417 -
Cmo17g00416 532 Pfam AAA ATPase domain 58 217 IPR041664 -
Cmo17g00416 532 MobiDBLite consensus disorder prediction 400 423 - -
Cmo17g00416 532 MobiDBLite consensus disorder prediction 1 33 - -
Cmo17g00416 532 Gene3D - 58 238 IPR027417 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo17g00416 K02607 - csv:101223023 883.248