Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo17g00473 | ATGTCCTTGAGTACCCAAATTGATAGCCTTTGGGTCTTCGCGTTGGCCTCCAAATGCTCCTCTCTCACCAAAGAGACCCTCCTTTGCTCACTCCTCTTTCTTCTCCTTATTTGCTTTCTTGTTTCCATTTTCCACTGGGCCCATCCTGGCGGCCCTGCTTGGGGCTCCCACGGGTGCTACCGCCGCACCGCCGCCGTCATCCCTGGCCCAAGAGGCCTCCCACTCATCGGGAGCATGACCTTGATGATGGGTCTGGCCCACCAACGAATCGCCGCCATCGCCAAATCCCTAGGAGCTACCCGTCTCATGGCTTTCTCACTCGCCTACACTCGCGTCATTGTCACTTCTCATCCCGACGTTGCTAAAGAGATCCTTAACAGCTCCGTCTTTGCTGACCGTCCGATTAAGGAATCTGCTTACTCTTTGATGTTCAATCGCGCCATTGGTTTCGCCCCTTATGGCCTCTACTGGCGGACCCTCCGCCGTATCGCTTCCCACCATCTCTTCTCCCCTAAACAAATCAAATCCTCTGAGTCACACCGCCGCCATATCGCTTCCCAAATGCTCACAATCTTCTCTTCCACCACCACCTCCTCCACCCACCGCGTCCGCGACACGCTCAAACGAGCCTCTTTGAACAGCATGATGGCCTCCGTCTTCGGCCGCTTCTACACCCTCACCGACTCCAATAACGAAGCCGAACAACTCCAAACCCTTGTCGCCGAAGGCTACGATTTATTGGGCCTTCTCAACTGGTCCGACCATCTCCCCTTCTTAGCCGATTTCGACCCACAGAGAATCCGGTTCAGATGCTCCCAATTGGTCCCCCAAGTGAACCAACTCGTCGGCCGGATCATCGCGGAACACCGGTCCAATTCAACCCCCCAACAAATCACGGATTTCGTCGACGTTCTTCTCTCTCTTCAACAATCTGACAATCTCTCTGACTCCGACATCATAGCCGTTCTCTGGGAAATGATATTCAGGGGTACGGACACGACGGCGGTATTAATGGAGTGGATTCTGGCCAGGATGGTTGTTCACCCGGAGGTGCAAGAAAAGGTACAATCGGAACTAGACACGGTGGTTGGGAGATCACGTGGCGTCGTGGAATCCGACATTCCGTCGCTGGTTTATCTAACCGCGGTGGTTAAAGAAGTTCTAAGGTTACACCCACCGGGCCCACTTTTATCCTGGGCTCGCTTAGCCATCACTGACACAACCATCGACGGTCACCACGTGCCTAAGGGCACCACTGCCATGGTTAACATGTGGTCGATAGCACGAGACCCACAGGTCTGGTCAGACCCACTTGAATTTAAACCCGAGAGGTTTGTGTCCGGGGGCGCTGACGTGGAGTTTTCAGTTATGGGTTCAGATCTACGGCTCGCTCCATTCGGGTCGGGTCGGAGAACTTGCCCCGGAAAGGCTCTTGCTTGGACAACTGTCATCTTCTGGGTGGCTACACTTTTACACGAGTTTAAATGGTTGCCTTCGCCCAACCAAAACGACGCCGTCGACTTCTCTGAAGTTCTCAAGCTCTCTTGCGAGATGGCCAATCCACTCACCGTTAAACTATGCCCAAGGCGTAATTCAAGCTTTTAA | 1605 | 53.77 | MSLSTQIDSLWVFALASKCSSLTKETLLCSLLFLLLICFLVSIFHWAHPGGPAWGSHGCYRRTAAVIPGPRGLPLIGSMTLMMGLAHQRIAAIAKSLGATRLMAFSLAYTRVIVTSHPDVAKEILNSSVFADRPIKESAYSLMFNRAIGFAPYGLYWRTLRRIASHHLFSPKQIKSSESHRRHIASQMLTIFSSTTTSSTHRVRDTLKRASLNSMMASVFGRFYTLTDSNNEAEQLQTLVAEGYDLLGLLNWSDHLPFLADFDPQRIRFRCSQLVPQVNQLVGRIIAEHRSNSTPQQITDFVDVLLSLQQSDNLSDSDIIAVLWEMIFRGTDTTAVLMEWILARMVVHPEVQEKVQSELDTVVGRSRGVVESDIPSLVYLTAVVKEVLRLHPPGPLLSWARLAITDTTIDGHHVPKGTTAMVNMWSIARDPQVWSDPLEFKPERFVSGGADVEFSVMGSDLRLAPFGSGRRTCPGKALAWTTVIFWVATLLHEFKWLPSPNQNDAVDFSEVLKLSCEMANPLTVKLCPRRNSSF | 534 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
17 | 3418249 | 3420131 | - | CmoCh17G004730.1 | Cmo17g00473 | 400856 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo17g00473 | 534 | PANTHER | CYTOCHROME P450 78A6 | 4 | 532 | - | - | |
Cmo17g00473 | 534 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 466 | 475 | IPR017972 | GO:0005506|GO:0016705 | |
Cmo17g00473 | 534 | Pfam | Cytochrome P450 | 68 | 504 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cmo17g00473 | 534 | PRINTS | E-class P450 group I signature | 210 | 228 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cmo17g00473 | 534 | PRINTS | E-class P450 group I signature | 318 | 335 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cmo17g00473 | 534 | PRINTS | E-class P450 group I signature | 338 | 364 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cmo17g00473 | 534 | PRINTS | E-class P450 group I signature | 381 | 399 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cmo17g00473 | 534 | PRINTS | E-class P450 group I signature | 423 | 447 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cmo17g00473 | 534 | PRINTS | E-class P450 group I signature | 463 | 473 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cmo17g00473 | 534 | PRINTS | E-class P450 group I signature | 473 | 496 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cmo17g00473 | 534 | Gene3D | Cytochrome P450 | 58 | 529 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cmo17g00473 | 534 | SUPERFAMILY | Cytochrome P450 | 67 | 529 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cmo17g00473 | 534 | PRINTS | P450 superfamily signature | 329 | 346 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cmo17g00473 | 534 | PRINTS | P450 superfamily signature | 382 | 393 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cmo17g00473 | 534 | PRINTS | P450 superfamily signature | 464 | 473 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cmo17g00473 | 534 | PRINTS | P450 superfamily signature | 473 | 484 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Cmo17g00473 | 534 | PANTHER | CYTOCHROME P450 78A7-RELATED | 4 | 532 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo17g00473 | Cmo-Chr17:3418249 | Cmo12g00085 | Cmo-Chr12:453319 | 2.97E-176 | dispersed | |
Cmo20g01128 | Cmo-Chr20:10922050 | Cmo17g00473 | Cmo-Chr17:3418249 | 2.64E-169 | transposed | |
Cmo17g00473 | Cmo-Chr17:3418249 | Cmo08g00824 | Cmo-Chr8:5248033 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo17g00473 | K20619 | - | csv:101216159 | 837.795 |